Lates calcarifer (barramundi perch): 108895876
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Entry
108895876 CDS
T04895
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4
KO
K22991
WD repeat-containing protein 45
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108895876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895876
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108895876
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
108895876
NCBI-ProteinID:
XP_018550345
LinkDB
All DBs
Position
LG9:331909..335804
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AA seq
358 aa
AA seq
DB search
MAQQRGVNSLQFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVALCSMLHRSNL
LAVVGGGVNPKFSEISVLIWDDARESRDPKDKLVLEFTFTKPVLAVRMRHDKIIIVLKNR
IYVYSFPDNPVKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLSNTKPGTS
SAPFTINAHQSEIACVALNQPGSVAASASRKGTLIRLFDTTTRDKLVELRRGTDPATLYC
INFSHDSSFLCASSDKGTVHIFALKDTKLNRRSALARVGKVGPVIGQYVDSQWSLASFTV
PAECACICAFGKNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagagaggagtcaacagcctgcagttcaaccaggaccagagctgcttctgc
tgcgccatggagacaggggtcaggatttacaatgtggagcccctgatggagaagggccac
ctggatcatgagcaggtaggcagtgtggccctgtgctccatgctgcatcgctccaacctg
ctggccgtagttggaggaggagtcaaccccaagttctcagaaatatcagtgctgatctgg
gatgacgctcgagagtcacgagaccccaaagacaagctggtcctggagttcaccttcact
aaacctgtcctggccgtccgcatgaggcacgacaagatcatcattgtattaaagaacagg
atctacgtgtacagttttccagacaaccctgtcaaactgtttgagtttgacaccagagac
aaccccaaaggtctgtgtgatttgtgtcccagtctggagaaacagctgctggtctttcca
ggtcataaatgtggcagcctgcagctggttgacttgtccaacaccaagcctgggacatca
tctgcccctttcaccatcaacgcccatcagagtgagatcgcctgcgtggctctgaaccag
cccggcagcgtggcagcgtcggcctctcgtaaaggaacgctgatccgcctgtttgacacg
acgaccagagacaaactggtggagctgcgcagaggaaccgacccggccaccctctactgc
atcaacttcagccacgactcctccttcctctgtgcctccagtgacaaaggcacagttcac
atctttgcactgaaagacaccaaactcaaccgtcgctctgcactggctcgtgttgggaag
gtcggtcctgtgattggtcagtacgtcgacagtcagtggtcattggccagtttcaccgtg
cccgctgagtgtgcctgtatctgtgcttttgggaagaacacgtccaagaacgtcaactct
gtcattgccatatgtgtggacgggaccttccacaagtacgtcttcacccctgatggaaac
tgcaaccgagaggccttcgatgtgtatctggatatatgtgatgatgatgacttctga
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