Lates calcarifer (barramundi perch): 108896114
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Entry
108896114 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108896114
KO
K13172
serine/arginine repetitive matrix protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108896114
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
108896114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108896114
NCBI-ProteinID:
XP_018550637
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Position
LG19:3387375..3405837
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AA seq
1644 aa
AA seq
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MGKPLSRPGCFRKSSCCLEKHGAGDGRVGGRDGGMEGGYGDGYIPQRSIYDTMCINQQID
SHHHHPGGSIRRDGGGEGNFSYSASGSLRVSRSPADMFDPQPRSLTPNPSFVRRLDERAI
YDSLKLGSQDADGGGCHSPGRFTRSVSPSVSSFSAPGVSSSSSKKHHHHHHHHHGDSTKS
RDGRHSWKVLTPPKHLECLELTTTEMMDRGGGYLNPGHYPPPGGQSSSLTSPLISPFSGS
PLSSGYHTPVFFSPAKPRPSQTQSLRCSPPHVIQPRHYSQTQSLRLSPPHELRRSPYRAP
LVQLSAHDLEQDLRDRGGGWGRSEREREWEREREREMERGWAQREWERERERGRLERERA
RERERRETSTFGTFGYGRPVPLHSDRDSVFLEPDQALDTTPLLLPQPSPSPSPSAAPRMG
TCAVGRNRAGSKVGPDSVGGGMVSKFDNGSVGLVLVDSKSGCGPRLVSEVGAANMSEAEI
RAGIQEHHRAESWNKYDKGSRASIKNGSETRMGSQVKTRPGGRDLEGKVQSGVEIENMAP
VKEGHRGSTRSGEKTGRGMAKPEPIAEAIPSPVTDTENRDGPEDKVETGPRMKPELQPET
EAKVSSKQVENRTGTEAGVIAKHNNEVGSESRADAKVETDVKTAFISEPEAVQEAGGGNE
TGTKSNTETGVVSEAPKSTKTTDKAQISVVAGHKAEITPADQAEKKPLDIDKTESSHKEK
GSKSQKNKSSKSSSRTRPGTATGLRPGVVSPQLGIGLGDLESPGPSEGIESTWPRRIIVR
KRTVRQGGALHNLPILPPLPSVLSALEKRRPHALLHPRPGHFSENPLTSVMNASSIVGRC
SLKEPSNPDPAQVASLVGRASLKEQNLEHWRVCREQEEPRRSRSKEKQGEPNKQKTERED
RKGKEEKREKERREEKDKKEDKVGKEKKKLTVGEGQVEETKQEMRRIEEKVQVNKTKEVL
KKEKDVEIISEKLNGRSMKIKDGIQEWHEQELEVVVTKLQKEDIEVEGGEGGTLGEEGGM
ESWDAVLEMVNTLWDDGWEKGGAGGGGDTDSFSGSLQRWPLLRPPVGFGGSHPPSSAASE
LSLTELERRARELDSDLEHLDLSQTHRDTQDLYQTLLEPQRERADMYQTHPGPQREKAAL
LTGVGSRSQVSLELSAMASPATDADRPPVDWSNKSAGTSTVGTSSTKEDSSPDSNLTLES
DSSGVFLSLSNQSQEEAGSDSDQPVSGSDLGSSSTSLEKDGEDGGLKEWGREESAELQWC
YPSLLNTSPHEDMELDGEKEETGCGRVGGYEERGEDEIRRKDDKIGVVSITKFPLDQTDI
VSLPTLNNPQSEEIPPRKKVTLMGHDPPFPLSPSKQSVKHLLDPNQKPIRSSGLDCGDLD
PFVQSDSFVYLAVSARPASRGEITTVKEVTTHDTEQDLIQTTLDDTKQHLDSVKTHLDQS
NPEQDAKPTHLGPLKPEEGDFLCTDSFVYLAAPACLLLGPAGTTPYSGRESDSESSGSGP
VDLSVLGCGSVAGDSDWDSDLSDSDPSRSSRSSAAGNKSSGVVRPKRLPAEPGWDLFGET
TEPEVLSELFTEQDRNNNGKARNGYWGYHQHASDTRHSHGNSVCHYNSEANNNNGRAVVN
NKESDMAVQTSPEISVHRKQKGER
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagccccttagccgtcccgggtgtttcaggaagagctcctgctgcctggagaag
catggagctggggatgggagagtgggagggcgagatgggggaatggaaggcgggtatgga
gatggctacataccccagcggtccatctatgataccatgtgcatcaatcaacagattgac
agccatcaccaccaccctggaggctccataaggcgagatggtggaggtgagggaaatttt
agttactctgcaagtggttccctcagggttagcagatccccagctgatatgtttgatcca
cagccccgctctttaactccgaacccctcatttgtgcggcgactggatgaaagagccatt
tatgattcactgaagcttggcagtcaggatgctgatggtggcggctgccactcgccagga
cgtttcacccggtcagtttctccctctgtgtcctcgttctcagcgccaggagtttcctcc
tcttcatccaagaaacaccatcatcaccaccaccatcatcatggagacagtacaaagagc
agagatggacgacattcctggaaagtcctgacacctccaaaacacctggagtgtctggag
cttactacaactgaaatgatggacagaggagggggatatctgaacccagggcactaccct
ccccccgggggccaatcctcttctcttacctcccctctcatttcccccttctctggctca
cctctttcttcaggttaccatactccagtctttttctctcctgccaaacctcgtcccagt
cagactcagagtttgcgctgttcccctccccatgtcattcaaccaaggcattactcccag
acccagagtcttaggctgtcaccaccccatgagctcagacgatcaccctaccgtgccccg
ctggtccaactgtccgctcatgacctcgagcaggacctgagggatcgaggaggaggatgg
ggccgcagtgagcgagaaagggagtgggagagggagagagaaagggagatggagcgaggg
tgggcccagagagagtgggaaagagagagggagagaggaaggctggagagggagagagca
agagaaagggagaggagggaaacatcaacttttgggacctttgggtatggtcgaccagtt
cctctgcattcagacagagactctgtgtttttagagcctgaccaggctttagacacaaca
cccctgttgctgccccagccctcaccttcaccctcccccagtgctgcccccagaatgggc
acctgcgctgtgggtaggaatagagctgggtcaaaggttggccctgacagcgtaggtgga
ggaatggtttctaagtttgacaatgggagtgttggtttagtattagttgacagcaaatct
gggtgtggacctaggttagtaagtgaagttggggctgcaaacatgtcagaggctgagatc
agggctggaatacaagaacaccacagagctgaaagttggaacaaatatgacaaaggatcc
agggctagcatcaaaaatgggtctgaaacaagaatgggctcccaggtgaaaacaagacca
gggggacgggatttggaaggaaaagtccaatctggggtagaaatagaaaatatggctcct
gttaaggagggacacaggggaagtacaaggagtggagaaaaaactggaaggggtatggct
aaaccagaacctattgctgaggctataccttcacctgttactgacactgagaacagggat
gggcctgaagataaagttgagactggaccaagaatgaagccagagcttcagccagagact
gaggctaaagttagttcaaaacaggtggagaacaggactggaacagaagctggagttata
gctaaacataataatgaggttggttcagagtccagagcagatgctaaagttgagacagat
gttaagactgctttcatatctgagcctgaggcagtacaagaagctgggggtggtaatgag
acggggactaagagtaacactgagactggagttgtcagtgaagccccgaagagcactaag
actacagataaagctcagataagtgttgtcgctggacataaagctgaaattacccctgca
gatcaggctgagaaaaagcctttggacattgataagactgaatctagccacaaagagaaa
ggctccaaatcccagaaaaacaaatcatccaaatccagctccaggactcgaccgggcaca
gccacagggctacgaccaggtgtggtcagcccacaactaggcatagggcttggagacctt
gagtcaccaggcccctctgaaggcattgagtcaacctggccacgccgaatcattgtcaga
aagaggactgttcgacagggtggggcactccacaacctccccatacttcccccactccct
tctgtcctctcagcattggagaagaggcgcccacacgccctcctccaccctcgcccaggc
cacttctcagagaacccactaacaagtgtaatgaatgcttcaagtattgtgggacgatgc
tcacttaaagagccctccaatccagacccggcacaggtggccagtttggtgggcagggcc
tccttgaaggagcagaacttggagcactggagggtctgcagagaacaggaggagcccagg
agatcccggagcaaggaaaaacaaggagagccaaacaagcagaagactgaaagggaagac
aggaaaggaaaagaagagaaaagagagaaggagaggagagaagagaaagacaaaaaggag
gacaaagtggggaaggagaaaaagaagcttactgttggtgaggggcaggtagaagaaacc
aaacaagaaatgagaaggattgaagaaaaagtccaagtaaacaaaactaaggaggtactg
aaaaaggagaaggatgtagaaataatatctgaaaagttgaatggaagaagtatgaagatt
aaagatggaatacaagagtggcatgaacaagagttagaggtggtggtcactaaattacag
aaagaggatattgaagtggagggaggagaaggagggacacttggagaggaaggggggatg
gagagttgggatgctgtccttgaaatggtaaatacattgtgggatgatggctgggaaaaa
gggggagcaggaggaggaggtgatacagattccttctcaggctccctgcagcgttggcct
ctcctccgacccccggtcggctttgggggatcacatcccccctcctcggcagcctcggag
ctcagcctgacagagctagagaggagagccagggagctggactctgatctggagcactta
gacctgtctcagacccacagggacacccaggatctataccagacgctgctggagccacag
agggaacgagctgacatgtaccaaacacaccctgggccgcagagagagaaagctgctctc
ttgacaggagttgggagcagatcccaggtcagtttggagcttagtgctatggcctcacca
gctacagatgcagacagacctcctgttgactggtcaaacaaatctgctgggacttccact
gttggcacaagctctaccaaagaggacagctctccagactccaacttgacgctggagtca
gactccagtggcgttttcctctccttatccaatcagagtcaggaggaggccggctctgac
agcgaccaaccagtcagcggttctgacttaggcagcagcagtacgtcactggagaaagat
ggagaagatggagggttaaaggaatgggggcgggaagagagtgcagagctacagtggtgc
tacccatcactcctcaacacctccccgcatgaggacatggaactagatggtgaaaaagag
gaaacagggtgtggaagggtgggaggatatgaagagagaggggaggatgagattagaagg
aaagatgataagataggagtagtttcaatcactaagttcccacttgaccaaacagacatt
gtgagcttgccaactctgaataatccacaaagtgaagaaataccacccaggaaaaaagtg
accctcatgggacatgaccccccttttcctctttctccctcaaaacaatcagtcaaacac
cttctagatcctaatcagaaaccaatcagaagctcaggactggactgtggtgacttagat
ccctttgtccagtcggatagctttgtttaccttgctgtgtctgcaagacccgcctcccgg
ggtgaaatcaccacagtaaaagaagttaccacccatgatacagaacaagacttaatacaa
acaacacttgatgatacaaaacaacatttggatagcgtgaaaacacacttggaccagtca
aatccagaacaggatgccaaaccaactcaccttggcccactaaaaccagaggaaggagat
tttctgtgcacagacagctttgtctatctggctgctccagcctgcctcctgctggggcct
gcaggaaccacaccctacagcggcagggagtcagactctgagagttcaggctctggccct
gttgatctgtcagtcctgggttgtggctcagtggcaggggacagtgactgggactcagac
ctgtccgattctgatcctagtcgctcctccagaagctctgctgctggtaacaaatcttct
ggtgtagtacgacctaaacgactgcctgctgaacctggctgggacttgtttggagaaacc
actgaacctgaggtgctgagcgagctcttcacagaacaggacagaaacaacaatggtaaa
gcaagaaatggttactggggttaccaccagcatgccagtgacaccaggcattcccatggc
aactcagtctgtcactacaacagtgaagccaacaacaacaatggtagagcagtcgtcaac
aacaaagaaagtgacatggcagttcaaaccagcccagagatcagtgtgcacaggaagcag
aaaggagaaagataa
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