Lates calcarifer (barramundi perch): 108897818
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Entry
108897818 CDS
T04895
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108897818
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108897818
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
Takusan
Motif
Other DBs
NCBI-GeneID:
108897818
NCBI-ProteinID:
XP_018553127
UniProt:
A0A4W6D629
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Position
LG3:10792576..10800637
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AA seq
294 aa
AA seq
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MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSKTIVNVWFNELKKAQVSRKLTFL
YLANDVIQNSKKKGPEFTQDFAPVIVDAFKHVYREGEEGCKKQLGRVLSIWQERAVYENN
LLDQLSQVLYGEKKAKKRTYEEIQPDDEDFASQSSPAEPPQTAELIRALQELENAASGDS
VLRQRISSLPAEVQDTSLLHRITDKESGERLSRLVEEACMLLADYSGRLAAEIDDRRQLT
RTLTVFLQSQKDGLAQNEQKLEEYKRKLARVTQVRKELRSRLNNLPGGLYNSSE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctttctctgaggcggctttagagaagaaactatccgagcttagcaactcccag
caaagtgtgcagacgttgtcgttgtggctcattcatcacagaaaacactcgaagaccatt
gtcaatgtttggttcaacgaactgaagaaagctcaggtatcacgcaagctgaccttcctt
tacttggccaatgatgtcattcagaacagcaagaaaaaaggaccagagttcacccaggac
tttgcaccggtcatcgttgatgcattcaaacatgtgtacagagagggcgaggagggctgt
aagaaacagttgggtcgggttttgtccatctggcaggagagagctgtgtacgagaacaac
ctgctggatcaactctcacaagtcctatatggagaaaagaaggctaagaagaggacatat
gaggaaatccaaccagatgatgaggactttgcctcccagagctccccagctgagccccca
cagacagcagagttaatccgagctctgcaggagctggaaaatgcagcctctggcgactca
gtgctgcgtcagcgaatctcctcccttcctgctgaggtgcaggacacgtcactgcttcac
aggatcacagataaagaatcaggggagcggctctcccggctggtggaggaggcctgcatg
ctgctagcagattacagtggtcgcttggcagcagaaatagacgataggaggcagctcacg
cgcacactaacggtcttcctgcaaagccagaaggacggcctggcccagaacgagcagaaa
cttgaagagtacaaacgtaaactggcaagggtgacccaggtccggaaggagctgcgttcg
cgtctgaacaatctcccaggaggactctacaactcgtcagagtga
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