Lates calcarifer (barramundi perch): 108900266
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Entry
108900266 CDS
T04895
Symbol
nr1d2b
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2b
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108900266 (nr1d2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108900266 (nr1d2b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108900266 (nr1d2b)
Nuclear receptors [BR:
lcf03310
]
1. Thyroid hormone like
1D. Rev-Erb
108900266 (nr1d2b)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108900266
NCBI-ProteinID:
XP_018556751
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Position
LG3:complement(2095615..2105042)
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AA seq
594 aa
AA seq
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MDSTKAGGVITYISSSSSASSPESCHSDSSNGSYQLASPPHGSSPSHRQLGQPADPTLPA
SGQNLPGAQKTGRSSSAKCGITKINGLVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQ
QNIQYKKCLKNESCPIMRINRNRCQQCRFKKCLMVGMSRDSVRFGRIPKREKQRMLLEMQ
SAMNNMMNNSQLHSQLHSSQALPIAKPLPASATEPTSEDAGSAPSCSPSSSPCSSQSDSS
SDPEPSVAMDTSPSSASPSASDSGEEEVIGSVTRAHQETFMYNQEQSSLTPETPTTTGPL
NNGSDQNTPNCWKEERQDAWNHRNNMVTMAAQDPSSSLGPQGPDDITPSHCPFRLSRSTA
SHCPAYTHGAFRAPASEDSINGAYNGHQWREGKRMHLVCPMNTSPHVDPQKSGHEVWEEF
SHSFTPAVREVVEFAKKIPGFRDLSQHDQVSLLKAGTFEVLVVRFASLFDVKDRTVTFLG
GKKYSVDTLRAMGASDLLNSMFDFSEKLINLGLSEEEMSLFTAVVLVSADRSGIENVNSV
EALQETLIRALRSLITKNHPNESAIFTKLLLKLPDLRSLNNMHSEQLLAFKVHS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggactcgaccaaagctggaggtgtaataacctacatcagctcatctagctctgcctcc
agtccagagtcctgccacagcgactcctccaatggcagctaccagttggcctccccgcct
cacggctcctcacccagccaccgccagctgggtcaaccagctgaccccacactccctgcc
agtggccaaaaccttccaggggctcagaagaccggacgctcctcctctgcaaaatgtggc
atcacaaaaatcaatggcctggtgctgctgtgtaaggtctgtggcgatgtggcctctggt
ttccattacggtgtccacgcctgcgagggctgcaagggcttcttcaggaggagcattcaa
caaaacatccagtataagaagtgccttaagaacgagagctgccccatcatgaggatcaac
aggaaccgctgccagcagtgccgcttcaagaaatgcctgatggtggggatgtccagagac
tctgtgcgttttggccgaatccctaaacgggagaaacagcgcatgctgctggagatgcag
agtgccatgaacaacatgatgaacaacagccagctgcacagccagctgcacagcagccag
gcgctacctatcgccaaaccgctgccagccagcgccacagaacctacctcagaggacgcc
ggctccgccccctcctgctctccatcctcatcaccgtgctccagccaatcagactccagc
tcggaccctgagccctccgtggcaatggacaccagccccagctcggcctcaccaagtgcg
tctgacagcggagaggaagaggtgattggctcagtgaccagggcccaccaggagaccttc
atgtacaaccaggagcagagcagcctgacacctgagaccccaaccaccacaggccccctg
aacaatggctctgatcaaaacaccccaaactgttggaaagaagagcggcaggacgcctgg
aaccaccgcaataacatggtcaccatggcagctcaggacccctcctccagcctgggtcct
cagggtccagatgacatcacccccagccactgccctttcagactgtccaggagcactgcc
agccactgtccagcctacacacatggagctttcagagccccagcttcagaggactccatc
aatggagcctacaatgggcaccagtggagagaaggcaaaaggatgcatctggtttgtccg
atgaacacgtctccccatgtggatcctcagaaatctggccacgaggtgtgggaggagttc
tcccacagcttcacccccgctgtcagggaggtggtggagtttgccaagaagatcccaggc
ttcagagatctgtcccagcacgaccaggtcagcctgctgaaggctggcacctttgaggtg
ttggtagttcgttttgcttctcttttcgacgtgaaggaccgcactgtaacctttctgggt
gggaagaagtacagtgtggatactctgagagccatgggggccagcgacctcctcaactcc
atgtttgactttagtgagaagctcatcaacctgggcctcagtgaggaggagatgagtctc
ttcactgctgtggttctggtctctgcagatcgttctggcattgagaacgtgaactcagtg
gaggccctgcaggaaaccctgatccgcgccctgcgaagcctcatcaccaagaaccacccc
aacgagtcggccatcttcaccaagctgctgctcaaactgcctgacctgcgctcgctcaac
aatatgcactctgagcagctgctggctttcaaggtccattcctga
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