Lates calcarifer (barramundi perch): 108900718
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Entry
108900718 CDS
T04895
Name
(RefSeq) cyclin-dependent kinase 9
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108900718
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108900718
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108900718
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
108900718
2.7.11.23 [RNA-polymerase]-subunit kinase
108900718
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: CMGC group
CDK family
108900718
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
108900718
Brd4/P-TEFb complex
108900718
7SK RNP complex
108900718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
RIO1
Motif
Other DBs
NCBI-GeneID:
108900718
NCBI-ProteinID:
XP_018557414
LinkDB
All DBs
Position
LG9:22034630..22040504
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AA seq
393 aa
AA seq
DB search
MQRDRTSNAGGAEKPDREAAIMSKYYDGVEFPFCDEFSKYEKMAKIGQGTFGEVFKAKHR
QTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGSI
YLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITR
DGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM
AEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRKVKDR
LKAYVKDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKNMLSTHNTSMFEY
LAPPRRRGHMPQQQPNQNRNPATTSQTEFDRVF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagacagaacaagtaacgccggcggggctgaaaagcccgaccgggaggccgcc
ataatgtcgaaatactacgatggagttgaatttcctttctgtgacgagttctccaaatat
gaaaaaatggccaaaataggacagggtacttttggggaggtgtttaaagcaaagcacaga
cagaccgggaagaaggttgcactgaagaaagttttgatggaaaatgagaaagaaggattt
ccaatcacagcattgagagaaatcaagatcctacagctgctcaaacatgagaatgtggtt
aatctgattgagatctgcagaaccaaagctactcagttcaataggtacaaaggcagcatc
tacctggtgtttgacttctgtgagcacgacctggctggactgctgagtaatgccaatgta
aagttcaccctggcagaaatcaagaaggtcatgcagatgctgcttaatggactgtactac
atccacagaaataagatccttcacagagacatgaaggctgccaatgtgctcatcaccaga
gatggtgtcctgaagttggctgactttggtttggctagagccttcagtctggctaaaaac
agccagggaaaccgctacaccaaccgcgtggtcacactctggtaccgacctccagagctt
ctgctaggagagcgagattacggcccacccattgacctgtggggagcaggctgcatcatg
gcagagatgtggacaagaagtcctatcatgcagggcaacacagagcagcaccagctcacg
cttatcagccagctttgtggctccattactgcagaggtgtggcctggcgtagataagaaa
tatgagctgtaccagaagatggagcttcctaaaggacagaagaggaaagtgaaggatcgt
ctcaaagcctatgtcaaagacccatacgctcttgacctgatcgacaagctcctggtcctt
gacccggcacagcgcatagacagtgatgatgcactcaaccatgacttcttctggtctgac
cccatgccgtcagacctgaagaacatgctctccacccacaacacctccatgtttgagtat
ctggccccacccaggcggagaggccacatgccccagcagcaacccaatcagaaccgaaac
ccagctaccaccagtcagactgaatttgatcgagtgttttag
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