Lates calcarifer (barramundi perch): 108901320
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Entry
108901320 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic differentiation factor 1
KO
K08033
neurogenic differentiation factor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108901320
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Atonal
108901320
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Gene cluster
GFIT
Motif
Pfam:
Neuro_bHLH
HLH
CCDC106
YL1
Nop53
Drc1-Sld2
CDC45
Pox_RNA_Pol_19
PBP1_TM
CENP-B_dimeris
DUF2457
Motif
Other DBs
NCBI-GeneID:
108901320
NCBI-ProteinID:
XP_018558298
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Position
LG1:complement(22975976..22981021)
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AA seq
353 aa
AA seq
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MTRSVREEQPSVESEEQQELHSPGEGEPERGGGGGGGGAEEEEEHLHHLEDDDDDDDEEE
EEEEEEEDGENKPKRRGPKKKKMTKARLQRFKIRRMKANARERNRMHGLNDALESLRKVV
PCYSKTQKLSKIETLRLAKNYIWALSEILRSGKAPDLMSFVQALCKGLSQPTTNLVAGCL
QLNPRTFLPEQTPDLPAHLPPAGAAAYPGHFSYQXPGLTAGLPSPPYGTMEPSHIFHQVK
GQPYGPLEPFFDGVLVSDGPAFDPPLSPPLSINGNFSSSFKHEAVTATDYEKSFSFSVHY
GGGGAGGHTAIYGGGGSNPRCGELQVDGLMGFDGHSHHERLMNAQLNAIFHDS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggtcggtgcgggaggagcagccgtctgtggagtcggaggagcagcaggagctc
cacagccctggggaaggagaaccagagaggggaggaggaggaggaggaggaggagcagag
gaggaggaggagcacctccaccatctggaggatgatgacgacgacgacgatgaggaggaa
gaagaggaggaggaggaggaagatggcgagaacaaacccaagaggcgagggccgaagaag
aagaagatgacgaaggctcgacttcagaggtttaagatccgtcggatgaaagctaatgcc
cgggaaagaaatcgcatgcatgggctgaacgacgctctggagagtctgcggaaagtcgtc
ccctgttattccaaaacccagaaactgtccaagattgagactctccgcctagccaagaac
tacatctgggccctgagtgagatcctgcgctccggcaaggcacccgacctgatgagcttc
gtccaggcactctgcaagggtctgtctcagccgaccactaacctggtggcaggctgcctg
cagctgaaccctcggactttcctcccagagcaaacacctgacctgccggctcatcttcca
cccgccggcgctgctgcctatcctggacacttctcctaccagnagcccggattgacggct
ggcctgcccagcccaccttatggcaccatggagccctcccacatcttccaccaggtgaaa
ggtcagccgtacggccctctcgagcccttctttgatggcgtcctggtgtcagacggcccg
gcatttgacccgccgctcagcccaccactcagcatcaacggaaacttctcctcgtccttc
aagcacgaggctgtcacagccaccgactatgagaagagcttctccttcagcgtgcactat
gggggaggaggagctgggggacacactgccatctacggcggagggggatccaacccgcgg
tgtggtgagctgcaggtggacgggctgatgggctttgatggacactcgcaccatgagcgg
ctgatgaacgcccagctgaacgccatcttccacgactcctga
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