Lates calcarifer (barramundi perch): 108902005
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Entry
108902005 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: jouberin
KO
K16740
jouberin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108902005
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
MKS complex
108902005
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Gene cluster
GFIT
Motif
Pfam:
WD40
SH3_1
SH3_2
SH3_9
hSH3
Motif
Other DBs
NCBI-GeneID:
108902005
NCBI-ProteinID:
XP_050934081
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Position
LG19:18722744..18732458
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AA seq
1211 aa
AA seq
DB search
MPAGESEDRAKTRERFNEVFKKYTETEKKKLKKKNTETQETIVLQNLKKNLNLEKDTEAD
ETILQNTYHPEQGSPRYTKNKRREKEIEEKVNINNSKNQEEIQTSKTKRKSKRDLPTLPT
AEDATTYNQKDKDAARTEIALEPDDADGGKLPKRKSKKGKSKGDTETKAESQIEDNEDTL
LHEYQQQIAQEEEKTLKKTRVKSEEESTVSQSVTLNNDVGKKKKKKLKSVVTESDIGDQD
EGADQDADVENETEPKGKKKKKKKKHVVKEESETEAEVPQKPTFDDSLVLGVYVHRTDRL
KTDLLISHPMVKIHVVDEITGQYVKKEDCHRPVSSFYEQENVDHILPIMTQPFDFKKNKS
IIPEWQEQIIFNERFGYFVEQNDESPRVILFFEILDFITMEEARANLDVDKHERGFRKIA
WAFLKLVGTNGVLNIDSKLRLQLFCPPPRSKRQPKTIEVVEWWRKYPRHKYASTLYVTVK
GIKLPEHVDPSIRSMMALQEERGSTSYSELQNEVTKKSLTQPLDNKPPLLRWSRLPGQVC
RIPNKPMLAFRGGQMGCFTVLFSHAGTILAAACADRDAFPVVVYEIPSGKVLAAFSGHLK
IVYDLCWSRDDQRLLSASSDGTVREWNVERLLGTAQKVLPHPSFVYCAQYHPTAQNLVVT
GGYDSLVRVWRLDVDDVNGQLLQEFEGHNSFINTVCFDTEGRRMFSADNTGLIIVWQTSV
YDSRQRRPCHRWCIERKIDESDLSGIPINMLQLHPNGRCLLIHAKDSVLRMMDLRILAVK
KYSGATNYRERIYSTFTPCGNFIFSGSEDGMAYVWNTDTGDQVAVYSELCYPTALHGVAF
HPHENMVAFCAFGQSQPVHVYLYDRKVSQLEVHSIKAVSRSASVDPKTVRNTPDLPVSQD
RSASSAMDQFAQSAKLALKMQCVKEQLDSVLEPHRRSSTPGYIFEQGTLTQGGLFSFQAG
LNASLPPPSLLSPHSKLQLSGSLAEQLIPQAALSTQTRRFSPVGQRLKGASSLRLQTTLP
DHIPSGVHVETDSAPVQQVVVSLYDYRANRSDELTIRRGDVIQVLYKDNDNWWFGRLVNG
QQGYFLASYVADEREFSEEVTQSVEAHSALSEGTAERSTPTRVSAAISSSGELRFLSEPT
LSDTEPELTDAKTRRKKKVKKPGVPALSPQTTFSDADASGSTSYRRRGRSTDRPLPKRPT
GRTNGAFEPDA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaggtgagagtgaagaccgggcaaaaacccgggaaagattcaatgaagtgttt
aagaaatacactgaaacagagaagaaaaagttgaagaagaaaaacactgaaactcaggag
accattgtgcttcagaatctaaaaaagaatctcaaccttgagaaagacacagaagctgat
gagaccatcctccagaacacatatcaccctgaacagggcagccctcgctacaccaagaac
aaaaggagagagaaggaaatagaagaaaaggttaatatcaacaacagtaaaaatcaagag
gagattcaaacatcaaaaacgaagaggaagagtaagagggaccttcccaccctccccaca
gctgaggacgccacaacttacaaccagaaggataaagatgctgccaggactgaaattgct
cttgagccagatgatgcagatggtggaaagttaccaaagcgaaaaagtaagaagggcaaa
agcaaaggagatacagagaccaaagcagagagccagatagaggacaatgaggacacattg
ctgcatgaataccagcagcagattgcacaggaggaagagaagactctgaagaagacgagg
gtcaaatcagaagaagagagcactgtctcccaaagtgttacgctgaataatgatgttggg
aagaagaaaaagaagaagctaaaatctgtagttacagagtcagatattggggatcaagat
gaaggagcagaccaggatgctgatgtagaaaatgaaacagaacccaagggaaagaagaaa
aagaagaagaaaaagcatgttgtcaaagaagagagtgaaactgaggcagaggtaccacag
aaaccaacatttgatgacagccttgtgctgggagtgtatgttcacagaacagatcgcctc
aagacagacctactgatctctcacccaatggtgaaaatccatgtcgttgatgaaatcact
ggacagtatgtgaagaaagaagactgccatcggccagtgtcctcattttatgagcaagag
aacgttgaccacattctccccatcatgacgcaaccttttgacttcaagaagaacaaatca
atcatccccgagtggcaggagcagatcatcttcaatgaacgctttggttactttgttgaa
caaaatgatgaaagccccagagtcatacttttctttgaaatcctggactttataaccatg
gaagaagcaagagccaaccttgatgttgacaagcatgaacgaggattcagaaagattgcg
tgggcattcctcaagcttgttggcacgaatggtgtgctgaacatcgacagtaaacttcgt
ctccagctcttctgccctccacctcggtcaaagagacaacctaaaacaatagaggtggtc
gaatggtggaggaagtacccacgacacaaatacgcatccacactttatgttacggtgaaa
ggcattaaactccctgagcatgtggaccccagtatccggtccatgatggcacttcaggag
gagagaggcagcacctcctacagcgaactgcagaatgaagtcaccaagaaaagcctgaca
cagcctctggacaacaagccgccactcttgagatggagcaggctgcctggtcaggtctgt
cggattcctaacaagcccatgctggcatttcgtggtggtcagatgggctgtttcacagtc
ctcttctctcatgctgggacgatactggctgcagcttgtgctgacagagatgctttccct
gttgtagtgtatgagattccctctggtaaggttttggctgccttcagtggtcatcttaaa
atagtctatgatctctgctggtccagagatgaccagagacttttgtctgcctcctctgat
ggaactgtcagagagtggaatgtggagaggcttctgggaacagctcagaaggtgctccct
catccatcctttgtgtactgtgctcagtaccaccccacagcccagaacctggtggtgacg
gggggctacgacagtctggtgcgagtgtggaggcttgatgtcgatgacgtgaatggccag
ctgctgcaggagtttgagggtcacaacagtttcatcaacacagtttgttttgacactgaa
gggaggagaatgttctccgcagacaacacaggcctaatcattgtgtggcaaacttctgta
tatgacagcaggcagcggcggccatgtcatcgctggtgtatagagaggaaaattgatgag
agtgacctcagtggtatccccatcaacatgctgcagctccatccaaacgggcggtgcctg
ctcatccatgccaaagacagtgtcctgaggatgatggacttgagaattctggctgtaaag
aagtacagcggtgccacaaactacagagagaggatttatagcactttcacaccatgtggg
aacttcatcttttctggtagtgaggatgggatggcgtatgtctggaatacagacacaggt
gaccaggttgcagtatactctgagctttgctaccccactgccctccatggtgtggcattc
caccctcacgagaacatggtggctttctgtgccttcggtcagagccagcctgtccatgta
tacctgtatgaccgcaaagtgtcccagctggaagtgcacagtattaaagcagtgagcaga
tcagcatctgtagaccccaaaaccgtcagaaacacacctgacctgccagtgtcacaggac
agatctgcttcttcagccatggatcagtttgcccagtcagcaaaactcgcactgaaaatg
cagtgtgtcaaggaacagctggattctgtacttgaaccacatcgaaggtcttcaactcct
ggatacatttttgagcaaggtactctcacacagggaggactcttttcttttcaggcagga
ttaaatgcctcattaccacctccgtctctcctgtcgccgcactcaaagctgcagctctct
ggttctctggcggagcagcttatcccccaggcagcgctgagcacccaaactcgcaggttc
agtccagtcggtcagcgtctaaaaggagcttcatctttgaggctgcagacgacccttcct
gaccacattccttcaggcgtacatgtggaaacagattctgcccctgttcaacaagtggtt
gtctcactctatgactacagagctaatcgttctgatgagctgaccatccgccgtggcgat
gtcatccaagtgctgtacaaagacaacgacaactggtggtttgggcgactggtcaatggg
cagcagggatattttcttgcttcttatgtagcagatgagagagagttcagtgaagaggtc
actcagtctgtagaggcacactcagccctgtctgaggggactgctgagaggtcaacacca
accagggtatctgctgcaattagttcttctggggaacttaggtttctttctgagccgacc
ctttctgacaccgaacctgagttgactgacgccaaaactagaaggaagaagaaggtgaag
aagccaggagtccctgcactgtcacctcagaccacattttcagatgcagatgcttcaggg
tcgaccagctacaggaggagaggcagatcaacagacagacctctccccaagagaccgaca
ggccggactaacggtgcctttgagcctgatgcataa
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