Lates calcarifer (barramundi perch): 108903003
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Entry
108903003 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
lcf04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108903003
04371 Apelin signaling pathway
108903003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
EGF_3
NOD
Ank_3
Ank_4
Ank_5
DL-JAG_EGF-like
cEGF
Motif
Other DBs
NCBI-GeneID:
108903003
NCBI-ProteinID:
XP_018560589
LinkDB
All DBs
Position
LG11:7844649..7874489
Genome browser
AA seq
2482 aa
AA seq
DB search
MEGNIPWIILSFLFFMHICEGFRCVDKYRPCENGGTCLDSSSRCICRPGFIGPLCQYLDP
CHRLPCLNGAACKSQVVNGVPQYSCVCQRGFRGQDCANIDACATSPCANGARCANWNNHY
NCSCPPGFQGKNCRNDIDECRKPGVCLNGGLCINTHGSFRCQCQPGYSGRTCEVSTLPCA
PSQCLNGGTCRQIGDHSYDCACLPGFEGHNCENNVDDCPGHKCMNGGICVDGVNTYNCQC
PPEWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCAIAV
CFNGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPAG
FVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECLSMPCQN
DATCLDRIGEFTCICMPGYMGTYCEIDVDDCESNPCVNDGICRDMVNGFTCTCQPGFTGT
MCQIDIDECASTPCQNGAKCYDRPNGFECRCAEGYEGTLCESNINNCQPDPCHHGTCIDG
IASYTCNCDAGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGPNCEINFD
DCASNPCDYGICKDGINRYDCVCKPGFTGPKCNVEIDECASSPCRNGGTCVDEENGFHCQ
CPEGFKPPYCYSQVDECGSSPCVHGSCRDDINGYRCDCEPGWVGKNCDLDRNDCLPSPCQ
NAGTCIDQLNGFTCKCRQGFRGNLCQVNINECASSPCLNKGTCVDGVASFTCLCELPYSG
PTCAEVLTPCSPNPCANNAVCTHTPDYMGYQCNCQPGWQGQLCNVDVNECISNPCKNRGT
CTNTLGGFVCSCRAGYTGLTCETDINDCSPNPCLSGGSCTDGMNSFHCSCLPGFTGPRCA
LEINECQSSPCKNGGTCTDYVNSYTCTCRPGFTGIHCETNIPDCTESSCFNGGTCTDKIN
GYSCNCRSGFTGSHCQYEVNECDSQPCLNGGICQDALESFRCSCPKGYTGNRCQAPVDWC
RRSSPCQNGGRCRQKDASFVCECTNGWSGRYCDIPRVSCETAARQRGIQTDDLCHHGGHC
VNTGNAHYCKCPADYTGSYCESQVDHCEDKPCRNGATCRGYVGGYQCDCMPGYTGQNCEI
EINECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCAPPLRLRGAPPKCLNNG
TCVDRVGGYRCNCPPGFTGERCEGDINECLSNPCSPSNSLDCIQLPNDYQCICKPGFTGR
RCQNRFSVCESQPCQNGGACSISSSSALGYTCTCQLGYTGPNCERSMSCRELFCYNGGSC
ALTTRGARCTCLPGYGGPQCQHRSNEGCSSQPCRNGGLCTEETSFPFFHCQCPTGWAGKR
CEQSRPDPTPSCPLADCHGKANDGVCDKECNTFACRWDGGDCSLAMNPWARCADPRCWRA
FNNSQCDESCNNPDCLYDNFDCKSKEKVCNPIYETYCIDHYADGRCDQGCNSEECGWDGL
DCAGKVPEDLADGVLVLVVLLPPEELLRTRTAFLQKLSAILHTTLRFRLDDKGEAMIRPY
TRKEARLKRELPPQQEVIGSIVYLEIDNRLCTQDSEDCFPTADTAAEYLGALSAREMLRF
PYPLKEARGEKLVPPPDPIPEWGKLMLVGIASLFVLVILVIGMLIARRKREHSTLWFPEG
FFLKKEPSSNKNRREPVGQDALGMKHMPKTVEESLLGDHSDQWMDSDCPEAKRLKVEEPS
MLSDSEDAVDSRQWTQHHLAAADIRVPPTMALTPPQGEFESDCMDVNVRGPDGFTPLMLA
SFCGGGLEPEVAEEDENEECSANIISDLIYQGASLAAQTDRTGETALHLAARYARADAAK
RLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRNRATDLDSRMYDGSTALILAARL
AVEGMVEELITCHADVNAVDELGKSALHWAAAVNNVDATVALLKNGANKDMQDLKEETPL
FLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVRSPQGH
GGAGHHLTGGHTLSPLMCPPSAFLPSLKNTPQGKKNRRPGAKGSSLGGQHASSLKDSVKA
RNKKLTLDMQSALLESSVTLSPVDSLDSPHGGASNAGYITNPTSPVAMQSPGLFHSSMSV
PNTPMVHSSMLEGGGPFAVSLAQLSDLGAGGMSLQGRVSMASDVNHGYVLSSGQMGLNMG
MVSPVSVPFDWHNRMPPSSQCGQQVVNLVQSSQAGMHPQSPAMQQQSMLMHQQQIFRNQM
LQPTPVTSTPTISPVKLPSIAEQQQQQQQQQQQQQLINHTITNQQNMARMGTSTPPTPQT
SQPPPSFFQQQQQQQQQMPQQPSQPQPPAQPPQSATPAVQPTQALPSQPSSSTAGTEDYP
TPPSQHSSYSSTLDATPKHYPRLPPEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPAV
AGPAQTQITQIPEANGKMQVFA
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaatattccatggattattttgtcatttttattttttatgcatatttgcgaa
gggttccgttgcgtggataaatacagaccttgtgaaaatggagggacatgcttagattca
tcttctcgatgcatatgtcgtcccggattcattggtcctctctgtcagtatctggatccc
tgtcatcgattgccgtgtctgaatggagcagcttgcaagagccaggtggtcaatggtgtc
ccacaatattcctgtgtgtgccagagagggttcagaggccaagactgcgctaacatcgat
gcctgtgccacaagtccctgtgccaatggggcccgttgtgccaactggaataaccactac
aactgttcctgcccacctggcttccagggaaagaactgccgcaatgacattgatgagtgc
cgcaagcctggcgtgtgcctcaatggtggcctctgcattaacacccacgggtccttccgc
tgccagtgccaacctggatacagcgggcgcacgtgtgaggtgtctaccctgccctgtgcc
ccatctcagtgccttaatgggggcacctgtcgacagatcggcgaccattcttatgattgt
gcttgcctaccaggttttgagggacacaactgtgagaataatgtagacgactgtccaggt
cacaagtgcatgaatggaggaatatgcgtggacggagtcaatacctacaactgccagtgt
ccaccagaatggacagggcaatactgtgccgaggatgtcaacgagtgtctcatgcaacca
aatgcctgccataatgggggtacttgcttcaacactatcggcggtcatacctgtgtctgc
gtcaatggttggactggagatgactgcagtgaaaacatcgatgactgcgccatagctgtt
tgcttcaacggtgccacttgccatgatcgtgtagcatccttcttctgcgagtgcccagtt
ggaaagacaggcttgctgtgccatcttgatgatgcgtgtgtgagtaacccctgcaatgag
ggggcagtgtgtgacaccaaccccctcaacggccgcgccatttgcacctgtcctgctggc
tttgtaggaggtgcctgcaaccaagacatggatgagtgttcaattggtgccaacccgtgt
gagcattttggaaaatgtgtgaacacagagggctccttccagtgtcagtgcggtcgggga
tatgctggtccacgttgtgagattgacatcaatgagtgcctgtccatgccctgccagaat
gatgccacttgcctggaccgcatcggagagttcacctgtatctgcatgccaggctacatg
ggaacttactgtgagattgacgtagatgactgtgagagcaacccatgtgtgaatgatggc
atctgtcgggatatggtcaatggcttcacatgcacctgccagccagggtttactggcacc
atgtgtcagatcgacatagatgagtgcgccagcacaccctgccagaatggagcaaaatgc
tacgaccggcccaatgggttcgagtgccgctgtgctgaaggttatgagggaacactctgc
gagagtaatatcaacaactgtcagccagacccatgccaccatggtacatgcatagatggc
attgccagctacacctgtaactgtgatgctggctacacaggctatcgctgtgagaaccag
ctcaatgagtgccacagcaacccttgtcagaatgggggcaagtgtgtggacctggtcaat
aagtacatctgccagtgccaacatggaacctcagggccaaactgtgagataaactttgat
gattgtgccagtaacccttgtgactatggcatctgcaaagatggcatcaaccgctatgac
tgtgtttgcaaacctggcttcactggtccaaagtgtaatgtggaaatagatgagtgtgca
tctagcccctgtaggaatggggggacatgtgtggatgaagagaatggatttcactgccag
tgtcctgagggctttaagcccccttactgttactctcaggtggacgagtgtggcagcagc
ccatgtgttcacggttcatgcagggatgacatcaatggttaccgctgtgactgtgagcct
ggatgggtgggaaagaactgtgacctggacaggaatgactgtttgccaagtccttgccag
aatgctggcacatgcatcgaccagctcaatggtttcacttgcaagtgtcgtcaaggcttc
agaggtaacctatgccaggtgaacatcaacgaatgtgcttccagtccctgccttaacaag
ggcacttgtgtggatggtgtggcaagtttcacctgcctgtgtgagcttccttacagtgga
cccacttgtgctgaggtcctcaccccttgctcccctaacccctgtgccaataatgctgtc
tgcacccacacaccagactacatgggatatcaatgtaactgccagccaggatggcaaggt
cagctgtgcaatgtagatgtgaatgaatgcatctcaaacccttgcaagaaccgtggaact
tgcactaacacacttggaggctttgtgtgctcctgcagagctggatacactgggcttacc
tgtgaaacagacatcaatgactgttctcctaatccatgcctaagtggaggttcctgcaca
gatggtatgaactccttccactgcagctgcctgccaggcttcactgggccacgctgtgcc
ttagagatcaatgaatgccagagctccccctgcaaaaatggaggcacatgcacagactat
gttaactcctacacctgcacctgtaggcctggctttactggcattcactgcgaaaccaac
attcctgattgtactgaaagctcttgcttcaacggagggacgtgcacagataaaatcaat
ggctattcctgtaactgccgctcaggcttcactggctcccactgccaatatgaggtcaat
gagtgtgactcccaaccgtgcctcaatggaggcatctgtcaggatgccctagagtccttc
cgttgctcctgccccaaaggctacactggcaaccgctgccaggcaccagtcgactggtgt
agacgctcatctccctgccaaaatggaggacgctgtcgccaaaaggatgcttccttcgtc
tgcgaatgtactaatggctggtctggacgttactgtgacatccctcgggtctcttgtgaa
acagctgctcgccagagagggatccagacagatgacctgtgccaccatggtggtcactgt
gtcaacactgggaatgcacactattgtaaatgtcctgctgactacacaggaagctattgc
gaaagccaagtggaccactgcgaagacaaaccctgccgcaatggcgccacctgcaggggt
tatgtgggagggtaccaatgtgattgtatgccaggatatactgggcagaactgcgagata
gagatcaatgagtgccagtctcatccttgccaaaacggaggcacttgcatagatctggtg
ggacattacatctgctcctgcccccctggcacactgggtgttctctgtgagatcaatgaa
gatgactgtgctccacctttgaggctgcgcggtgctcctccaaagtgcctcaacaatggc
acctgtgtggatagagtgggtggataccgctgcaactgtccccctggattcacaggagaa
agatgtgagggagacataaacgagtgtctctccaatccctgcagtccctccaacagtctt
gactgcatccagttgcccaatgactaccagtgtatttgcaagcccggcttcacaggtcgg
aggtgtcagaacaggttcagtgtttgtgagtctcagccttgtcagaacggaggagcatgt
tctatatccagcagctctgcactgggatacacctgcacatgtcagcttggttacactggg
cccaattgtgaaagaagcatgtcctgtcgggagctcttctgctacaatggaggtagctgt
gcacttaccacaaggggggcacgttgcacctgcctgccaggttatggcgggccccagtgt
cagcatcgtagtaatgaaggctgctcctcacagccatgtcggaatggagggctgtgcacc
gaagagaccagcttcccgttctttcactgccagtgtcccaccggctgggcaggtaaacgg
tgcgagcagagcaggcccgatcctacaccctcatgccctctggcagactgtcatggcaaa
gccaatgatggtgtttgcgacaaagagtgcaacacattcgcttgtcgctgggacggcggc
gactgctctctagcaatgaacccctgggctcgctgtgcagatcctcgctgctggcgtgcg
ttcaataacagccagtgcgatgaatcctgcaacaacccggattgtctgtatgacaacttt
gactgcaaaagcaaggagaaagtttgcaatcccatatatgaaacctactgtatcgaccac
tatgctgatggacgttgtgaccagggctgcaactcagaggagtgtggctgggatggctta
gactgtgcagggaaggttccagaagaccttgccgatggtgtcttggttttagtagtccta
ttgcctccagaggagcttctccgcaccaggacagcctttctgcagaagttaagcgccatc
ttacacactacgctgcgcttccggctggatgacaaaggagaggccatgatccgcccctac
acccgcaaagaggcgcgcctcaaaagggagctgccgcctcagcaggaggtcatcgggtcc
atagtgtacctggaaatagacaaccgtctgtgcactcaggactctgaggactgcttccct
acagctgacactgctgcagagtacctgggagccctgtcagccagagaaatgctccgcttc
ccttatccactcaaagaagcccgtggtgaaaaattggtaccacctcctgaccccatacct
gaatggggcaagctgatgctggtggggatagcttctcttttcgttttagtcatccttgtg
ataggcatgttgattgctcgtagaaagagagaacacagtaccctttggttccctgagggc
ttcttcctcaaaaaggaacccagcagcaacaagaaccgcagggaacctgttggccaggat
gctctgggaatgaaacacatgccaaaaactgtggaggaatctctccttggagatcatagt
gaccagtggatggactcagactgcccagaggcaaaaaggctcaaggttgaggagccaagc
atgctctcagacagtgaagatgcagtggacagtagacagtggacgcagcatcaccttgct
gccgcagacattcgtgtgcctcccaccatggccctcaccccacctcaaggagagtttgaa
agcgactgtatggacgttaatgtccgaggcccagatggttttacacctctgatgctggca
tcattctgtggaggcggcttagagcctgaggtagcagaggaggacgagaatgaggagtgt
tcagccaacatcatctccgacctgatataccagggtgcatcccttgctgcccaaacagac
cggactggtgagacagcgctccacctggcagcccggtacgcccgtgctgatgctgctaag
aggctgctggatgccggtgcagatgccaatgctcaggataacacgggacgtaccccacta
catgctgcagtggctgcagatgcacagggtgtcttccagattctgatccgaaaccgagct
acagatcttgactcccgtatgtatgatggctccactgcactcatcctggctgcacggctg
gcagtagagggcatggtagaggaactcattacttgtcatgctgatgtcaatgcagtagat
gaactgggtaaatctgccttacactgggctgctgccgttaataacgtggatgccactgtt
gccctgctaaagaatggcgcaaacaaggatatgcaagatctcaaggaggagacccctctg
ttccttgcagcccgtgaaggtagctgtgaggctgtgaaggtgctgctggctcactttgca
aacagagagatcacagaccatatggacaggttgccaagggacattgctcaggagcgtatg
caccacgacattgttcagcttcttgatgagtacaatacagtaagaagtccccagggccac
ggaggggctggacaccacctcactgggggacacactctgtcacctctcatgtgccctccc
agtgccttcctgcctagcctgaagaacaccccacagggcaagaagaatcgtcggcctggg
gccaagggttccagcctgggaggccaacatgcttccagtctgaaggattcagtcaaggcc
cgcaataagaagctgaccttggacatgcagagtgccttactggagagctcagttaccctg
tccccagtggactcactggactcaccccatgggggagctagcaatgctggctatatcacc
aaccccacttcgcctgtggccatgcagtcaccagggctcttccactcctccatgtctgtt
ccaaacaccccaatggtacatagtagcatgttggagggtggtggccctttcgctgtgtct
ctagcacagctcagtgacctgggagctggagggatgtccttgcagggacgtgtttccatg
gcttctgatgtcaaccacggctatgtgctgagttcaggccagatggggctcaacatgggc
atggtcagtcccgtcagtgtgccctttgactggcacaaccggatgcccccttcctcccag
tgtggtcagcaggtggtgaatcttgtgcagagtagccaggcaggcatgcacccccagagc
ccagccatgcagcagcagagcatgctgatgcaccaacagcagatcttccgtaatcagatg
ctgcagcccacacctgttacctccacacccactatcagcccagtcaagctgccttccatt
gctgagcagcagcagcagcagcagcaacagcagcagcagcagcagctcatcaaccacacc
atcaccaaccagcagaacatggcccgcatgggcacctccaccccaccgacaccccagacc
tcacaacctccaccatcttttttccagcagcagcagcagcagcagcagcagatgcctcag
cagccctctcagccccagcctcctgctcagcccccacagtcagccacgccagcagtccag
cccactcaggctctgccctcccagcctagtagcagcactgcaggaacggaggattaccca
acccctccctcccagcacagcagctactcatccacactagatgccacacccaagcattac
ccccgtttgccccctgagcacccctatctgaccccctccccagagtctcccgagccctgg
tccagcccctctcctcactgtgtctctgattggtcagattccacacccagcccagcagtt
gctggccctgcccagacccaaattactcaaatcccagaggccaatggcaagatgcaggtg
tttgcatga
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integrated database retrieval system
