Lates calcarifer (barramundi perch): 108903033
Help
Entry
108903033 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 10
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108903033
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108903033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
108903033
NCBI-ProteinID:
XP_050931701
LinkDB
All DBs
Position
LG14:7530557..7537352
Genome browser
AA seq
804 aa
AA seq
DB search
MTVTYNLCALLVFTISVCSRFVPALCSAHCGHSLQVLDNQVGEIRSSAYHSWSYRFGPTY
DCWIIKGVEGEPVVLSFSQFSARCRKEWVSIKSSTGGEPVVLCGSKLPPPMEFPGGNITV
MHHFLPHLFPVSSFLLSYARDSGECPVTSFECLGGRCLPLSWRCNGQVECLGEGPGIGTD
EQDCDAEVETPQPPKRRSTQAEETQRETYTEINHDRDSDRHKPVDKTWSSDRSAERNSES
ELWQSMKDREEEESQVDREQPQTHKEMAVTPTPIEWPCGGLLQTFYGTFSPPAIRNSALY
CVWTLDPQDSRPLRLDLQQLVLGHGDRLTIYNREQGNGDVIKTITSTSNYKSVQVESHTG
LLSMVYETLPGSEGSGFNATFHVGSYCPPWEGRCGGASGGCFTQEQRCDGKWDCPETGKD
EEGCRGCSPNQFACGMTGQRALPPSHFSGRPVCYPVTERCNYQLYCADGRRRADCTVCQP
GTFHCDSDRCVFESWRCDGQVDCKDGTDELNCTVILPRKVITAATVGSLVCGLLLVIAMG
CTCKLYSLRTREYSMFAPISRQEAELIQQQAPPSYGQLIARASSPARWRLPTENPNETSS
LSLRGILQLLRQDASSSPHRRRRPRFVRRAVRRMRRWXLIPRPPSRPTQASSSGQQQSDX
RSSGQEPAHSTPXSSSSAVEAVNQPVPQKLGLLAQSEQQQQQQEAPPPLLPLPPPPVSSP
PPPPYAPPAPPTAALHTPPVAVPPSSPSLASIFHTLGLSISLFRASPSSSSTNSMPLSAS
PSFSSSSSDDEGAAYPLSEDTFRG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcacttacaacctctgtgccctcctggttttcaccatatcagtgtgcagccgt
tttgtgcccgccctctgttcagcccactgcgggcattcacttcaagtcttagacaaccaa
gtgggagagatcaggagttctgcttaccacagctggtcctaccgcttcggcccaacctat
gactgctggatcatcaagggtgtggagggagaacctgtcgttctcagcttttcccagttt
tcagctcggtgtaggaaggaatgggtgtctataaaatcatcaactggtggtgagccggtt
gtcctctgcggctctaagctgccgccgcccatggaattcccaggggggaatattacagtg
atgcaccacttcctcccgcatctgttccctgtgtcatcgtttctgttgagctatgccaga
gactcaggtgaatgcccagtgacatcttttgaatgcctggggggtcgttgtcttcccctc
tcctggcgctgtaatggccaggtggagtgtctcggtgaaggtcctggcatcggcactgat
gaacaggactgcgatgcagaagtggaaactccacaacccccaaagcgacgcagcacacag
gcagaggagacccaaagagaaacatatacagagataaaccatgacagggactcggacaga
cataagccagtagataaaacttggagctcagacaggtcagctgagagaaatagtgagtct
gaactgtggcagtcgatgaaggacagggaggaggaggagtcccaggtggatcgagagcaa
cctcagactcataaggagatggctgtgacacccactcccatcgagtggccttgcggaggg
ctcctccaaaccttttatgggacgttctcccctccagccattcggaattctgctctgtac
tgtgtctggactctggaccctcaggactccaggccactcagactggacctgcagcagttg
gtgctgggacatggggacagactcaccatctacaacagagagcaaggcaatggggacgta
attaaaactatcaccagcacctccaattacaagtcagtccaagtggaatcccacactggc
ctgctgtcgatggtttacgagacacttcctggctcagaggggagcggttttaacgccacg
ttccacgtcgggagctactgccctccatgggagggtcggtgtgggggagcatcaggaggt
tgtttcacccaggagcaaaggtgcgacgggaaatgggactgccctgagacggggaaggat
gaggagggatgcagaggctgcagtccgaaccagtttgcctgtgggatgacgggacagagg
gcgctgccgcccagccacttctctggcaggcccgtgtgttacccagtcacagagagatgc
aactaccagctgtactgtgccgatggcaggcgacgagcggactgcaccgtgtgccagcca
gggacctttcattgtgacagcgacaggtgcgtgtttgagagctggcggtgtgacggccag
gtggactgtaaggacggcacggatgagctcaactgcaccgtcatcctgccccgcaaggtc
atcaccgcggcaacggttggcagcctggtctgtggactcctgctggtgatcgccatgggc
tgcacctgtaaactgtattcgctcaggaccagggagtacagcatgtttgctccaatcagc
cgtcaggaagcggagctgatccagcaacaggctcctccatcctacggtcagctgattgcc
agggcatcatcccccgcccggtggagacttcccacagaaaaccccaacgagacctcgtct
ctgtctctgaggggaattctccagctcctccgtcaggatgcctccagctccccgcatcgc
agacgcaggccccgatttgtccgccgggccgttcgccgcatgaggaggtggngtctcatc
cccagacctccctccaggccgactcaggcatcaagctctggtcagcagcagtcggacngc
cgctcctccggtcaggaaccagctcactccactccancaagctcctcgtcggctgtggag
gcagtcaaccagccggtgcctcagaaacttggcttgttggctcagtcagagcagcagcag
cagcagcaggaagcaccacctcctctactgccgcttccccctccgcctgtctcctctccg
cctccacctccgtatgctcccccagctcctcccacggccgcccttcacactcctcctgta
gccgtccctccgagcagcccctctctggcctccatcttccacacgctgggcctgagcatc
tccctcttcagagcctcgccttcttcctcctccaccaactccatgcccctctccgcctcc
ccgtctttctcctcgtcctcttcagacgacgagggtgctgcttatcccctctctgaagac
accttcagaggatga
DBGET
integrated database retrieval system
