Lates calcarifer (barramundi perch): 127138955
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Entry
127138955 CDS
T04895
Name
(RefSeq) E3 ubiquitin-protein ligase HECTD1-like isoform X1
Organism
lcf
Lates calcarifer (barramundi perch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
MIB_HERC2
F5_F8_type_C
DUF6735
Motif
Other DBs
NCBI-GeneID:
127138955
NCBI-ProteinID:
XP_050923319
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MCPVNKGDDKKKKDVNKEEEEGSEPKGDPEMAPIYLKRLLPVFAQTFQQTMLPSIRKASL
ALIRKMVHYSSEVLLKEVCDSETGHNLPTVLVEITATVLDQEDDDDGHLLALQIIRDLVD
KGGDVFLDQLARLGVINKVSTLAGPASDDENEDEAKPEKEEEVQEDAREIQQGKPYHWRD
WSIIRGRDCLYIWSDAAALELSNGSNGWFRFILDGKLATMYSSGSPEGGSDSSESRSEFL
EKLQRARSQVKPVTASQPILSSVGPTKLTVGNWSLTCLKDGEIAIHNSDGQQATILKEDL
PGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVKSMARELYDDHF
KAVESMPRGVVVTLRNISTQLESAWELHTNRQCIEGENTWRDLMKTALENLIVVLKDENT
ISPYEMCSSGLVQALFTVLNNSVELDLKHDCKPLMERINVFKAAFSENEDDESRPAVALI
RKLIAVLESIERLPLHLYDTPGSSYNLQILTRRLRFRLERAPGETALIDRTGRMLKMEPL
ATVESLEQYLLKMVAKQWYDFERSSFVFVRKLREGQTFTFRHQHDFDENGIIYWVGTNAK
TAYEWVNPAAYGLVVVTSSEGRNLPYGRLEDILSRDSSALNCHTNDDKNAWFAVDLGLWV
IPSAYTLRHARGYGRSALRNWVFQVSKDGQNWTTLYTHVDDCSLNEPGSTATWPLDPSKE
EKQGWRHIRIKQMGKNASGQTHYLSLSGLELYGTVTAVCEDQLGKAVKEAEANLRRQRRL
FRSQVMKYIVPGARVVRGIDWKWRDQDGNPAGEGTVTGEAHNGWIDVTWDAGGSNSYRMG
AEGKFDLKLAPGYDPESAATAPSPKPVSSTVSGPASSTVGPSVTPAASGGATTTTSSSSS
AAAVVEQPGEK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccggtgaacaaaggcgacgacaagaagaagaaagatgtgaacaaggaggaggag
gagggcagcgagcccaaaggagacccagagatggctccgatctacctgaagagactgctg
cctgtttttgcacaaacctttcagcaaaccatgctgccttctattaggaaagccagtctg
gctctgatcaggaagatggttcactacagcagtgaagtcctgctgaaggaggtgtgtgac
agtgagacgggacacaacctgcccactgtgctggtggagatcactgctactgtcctggac
caggaggacgatgatgacggtcacctcctggctctgcagatcatcagagatctggtggat
aaaggaggagacgttttcctcgaccagctggctcgactgggagtcatcaacaaggtgtcc
actctggctggaccggcgtccgatgacgagaacgaggacgaagcgaagcctgagaaggag
gaggaggtgcaggaggatgcgagggagatccagcaggggaagccgtatcactggagggac
tggtccatcatcagagggagggactgtctgtacatctggtccgacgccgccgccctcgaa
ctctctaacggctccaacggctggttcaggttcatcctggacgggaagctggccaccatg
tactccagcgggagtccagagggggggtcggacagctcagagtctcgcagtgagttcctg
gagaagctgcagcgggcgaggagtcaggtgaagcccgtcacagccagtcagcccatcctg
tccagcgtgggtcccaccaagctgaccgtggggaactggtccctgacctgcctgaaggac
ggagagatcgccatccacaactcagacggacagcaggccaccatcctgaaggaggacctg
ccgggcttcgtcttcgagtccaacaggggaaccaaacactccttcaccgccgagacgtcg
ctgggctctgagtttgtgacgggctggacggggaagagaggcaggaagctgaagtcgaag
ctggagaagacgaagcagaaggtgaagagcatggcgagggagctgtacgacgaccacttc
aaagctgtggagagcatgcccagaggagtggtggtcaccctgaggaacatctccacacag
ctggagtccgcctgggagctgcacaccaacagacagtgtattgaaggggagaacacgtgg
agggacctgatgaaaaccgctctggagaacctgattgtagttttgaaggatgaaaacacc
atctctccgtatgagatgtgcagcagtggcctggtccaggctctgttcacggtcctcaac
aatagcgtggaactggacctgaaacatgattgtaagcctttaatggagaggatcaatgtc
tttaaggcggctttcagcgagaatgaagacgatgaaagccgaccagctgttgccttaatc
cgtaaactgatagctgtcctggagtcaattgaacgtctacctctgcacctgtatgacact
ccaggatcctcctacaacctgcagatcttgacgaggaggttgcgtttccgtctcgagcga
gcgccgggtgagacggctctgatcgaccggacggggcgtatgttgaagatggagccgctc
gctactgtggagtctctggagcagtacctgctgaagatggtggcgaagcagtggtatgac
tttgagcgctcgtccttcgtctttgtgaggaagctgagggaaggacagaccttcaccttc
agacaccagcacgactttgacgagaacggcatcatctactgggtcggaaccaacgccaag
acggcgtacgagtgggtaaaccctgctgcctacggcctggtggtggtgacatcatcagag
gggcgtaacctcccctacgggcgcttggaggacatcctgagtcgggatagctccgccctg
aactgccacactaacgacgacaagaacgcctggttcgccgtcgacctcggcctctgggtc
attccctcagcgtacaccctgagacacgccaggggttacggccgctctgcgttgaggaac
tgggtgtttcaggtgtcgaaggacggtcagaactggacgactctttacactcatgtagac
gactgcagcctcaacgaaccagggtcgacggccacgtggcctctggacccgtccaaagag
gagaagcagggctggagacacatcaggatcaaacagatggggaagaacgccagcggtcag
actcactacctgtccctgtctggactggagctgtacggcaccgtcaccgccgtctgcgag
gaccagctcggtaaagctgtgaaggaggcggaggcgaacctccgccgccagcggcgcctg
tttcgctcccaggtgatgaagtacatcgttcctggggcacgggtcgtccgcggcatcgac
tggaagtggcgagaccaggacggaaacccggcgggagagggcacggtcaccggagaggct
cacaacggctggattgatgtaacctgggatgctggcggctctaactcttaccgtatgggc
gctgaagggaagtttgacctcaagcttgctccagggtacgaccctgagtcggctgccaca
gcgccgtcacccaaacctgtctcatccactgtttcaggccccgcctcctccacggtggga
ccgtccgtgacgccggcggccagcggcggcgccaccaccaccacctcctcgtcgtcctcg
gcagcagcagtcgtggagcagcctggtgaaaaataa
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