Leptothrix cholodnii: Lcho_0549
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Entry
Lcho_0549 CDS
T00681
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lch02044
]
Lcho_0549
02035 Bacterial motility proteins [BR:
lch02035
]
Lcho_0549
Secretion system [BR:
lch02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Lcho_0549
Bacterial motility proteins [BR:
lch02035
]
Pilus system
Pilus assembly proteins
Lcho_0549
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
PBP_like
SPX
Motif
Other DBs
NCBI-ProteinID:
ACB32824
UniProt:
B1XYU0
LinkDB
All DBs
Position
complement(594158..595384)
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AA seq
408 aa
AA seq
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MATAAAVAAKKIKDFVFEWEGRDRNGKAVRGEMRAGGEAMVSASLRRQGIMVVKVKKRRI
SGGKSIKGKDIAVFTRQLATMLKAGVPLLQAFDIVARGSSNPRLTRMLTDIRGDVETGTS
LSAAFRRHPLQFDALYCNLVEAGESAGILETLLDRLANYQEKTIELQNKIRSALIYPVAV
LVVAFIVVAVIMIFVIPSFKDIFKSFGADLPLPTLIVIAMSEFFVQYWFAIFGGIGLAVY
MTIQSWRRSERMQMALDRFMLKVPIFGQLVHKAAVARWARTLSTMFAAGVPLVEALDSVG
GAAGNAVFAQATEQIQRDVSTGAALTSSMQATNIFPNMVLQMSSIGEESGSLDQMLSKVA
DFYEQEVDEAVKGLSTLMEPIIIVVLGTIIGGIVVSMYLPIFKLGQVV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcagctgcggtagcggcgaagaagatcaaggacttcgtctttgagtgggag
ggccgtgaccgcaacggcaaggccgtgcgcggcgagatgcgcgccggcggcgaggccatg
gtcagcgccagcctgcgccgccagggcatcatggtcgtcaaggtcaagaagcgccgcatc
tcgggcggcaagtcgatcaagggcaaggacatcgcggtcttcacgcgccagctggccacc
atgctcaaagccggcgtgccgctgctgcaggccttcgacatcgtcgcccgcggcagctcg
aacccgcgcctgacgcgcatgctgaccgacatccgcggcgacgtcgagaccggtaccagc
ctgtcggcggccttccgccgccacccgctgcagttcgacgcgctgtactgcaacctggtc
gaggccggcgaatccgccggcatcctggagaccctgctcgatcgcctggccaactaccag
gaaaagaccatcgagctgcagaacaagatccgctcggcgctgatctatccggtggcggtg
ctggtggtggcgttcatcgtggtcgcggtgatcatgatcttcgtgatcccgtcgttcaag
gacatcttcaagtccttcggcgccgacctgccgctgcccacgctgatcgtgatcgctatg
tcggaattcttcgtccagtactggttcgcgatcttcggcggcatcgggctggcggtctac
atgacgatccagagctggcgccgctccgaacgcatgcagatggcgctcgaccgcttcatg
ctcaaggtgccgatcttcggccagctggtgcacaaggccgcggtggcgcgctgggcgcgc
acgctgtcgaccatgttcgccgccggcgtgccgctggtcgaggcgctcgattcggtcggc
ggcgcggccggcaacgcggtgttcgcgcaggccaccgagcagatccagcgcgacgtgtcc
accggcgcggcgctgacgtcctcgatgcaggcgaccaacatcttcccgaacatggtgctg
cagatgagctcgatcggcgaggaatcgggctcgctcgaccagatgctcagcaaggtagcc
gacttctacgaacaggaggtcgacgaggccgtcaagggcctgtcgacgctgatggagccg
atcatcatcgtcgtgctcggcaccatcatcggcggcatcgtggtctcgatgtacctgccg
atcttcaagctgggccaggtggtctga
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