Leptothrix cholodnii: Lcho_2087
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Entry
Lcho_2087 CDS
T00681
Name
(GenBank) poly(R)-hydroxyalkanoic acid synthase, class I
KO
K03821
poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:
2.3.1.304
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00650
Butanoate metabolism
lch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Lcho_2087
Enzymes [BR:
lch01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.304 poly[(R)-3-hydroxyalkanoate] polymerase
Lcho_2087
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PhaC_N
Abhydrolase_1
DUF3141
Motif
Other DBs
NCBI-ProteinID:
ACB34354
UniProt:
B1Y255
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Position
complement(2276302..2278062)
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AA seq
586 aa
AA seq
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MSAFLGQMPGLAGLAGGTNLEESLRQTLAMGGLADLGRAGQQLGSLGSSLGDSLKGFTKL
QIPPAELSRIQAEYVQQAAQLWNSALTGAASPAPGDRRFASAEWSSSPMSGFTAALYLLN
ARTLMQMAESVDGDAKTRARVRFAVQQWIDAAAPSNYLALNPDAQKKALETKGESIALGM
QHLIADMRQGHVSQTDESLFEVGRNVATTEGAVVFENELFQLLEYKPLTEQVHERPMLFV
PPCINKYYILDLQPDNSVIRYTVAQGHRVFVLSWRNPDESLAAKTWDDYTEDAVIKAIRV
VQEIGGTDTIDMLGFCVGGTLLTCALAVLAARGEQPAASVTLLTSFLDFSATGILDLFID
EASVRLREITLGADAPKGPGLLKGKELAATFSFLRPNDLVWNYVVGNYLKGETPPPFDLL
YWNSDSTNLPGPMYCWYLRNTYLEDKLKVPGALTVCGEKVDLGKIKAPFYLYASREDHIV
PWDSSYLNTRILNGKLRFVMGASGHIAGVINPPTKKKRSHWINDKLPETAQAWLDGATEH
AGSWWPDWSEWLKGHAGKLKAAPKTYGNRKYKPIEPAPGRYVKQKV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattcctcgggcagatgcctgggttggccggccttgcgggcggcacaaacctc
gaagagagtctcaggcagaccttggcgatggggggcctggctgatctgggccgtgcaggc
cagcagctgggttcgttgggcagcagcctgggcgattcgctcaagggcttcacgaagctg
cagatcccgccggccgaactgtcgcgcatccaggccgaatacgtgcagcaggccgcgcaa
ctctggaacagcgcgctcaccggagccgcctcgccggccccgggcgatcggcgtttcgcg
tcggccgaatggtcgtcgagcccgatgtcgggcttcaccgcggcgctctacctgctcaat
gcgcgcacgctgatgcagatggccgaatcggtcgacggcgatgccaagacccgcgcccgc
gtgcgcttcgcggtccagcagtggatcgatgcggcggcgccgtccaactacctggcgctc
aacccggacgcgcagaagaaggcgctcgagaccaagggcgagagcatcgcgctgggcatg
cagcacctgatcgccgacatgcgccagggccatgtctcgcagaccgacgagagcctgttc
gaggtcggccgcaacgtcgccaccaccgaaggcgcggtggtgttcgagaacgagctcttc
cagctgctcgaatacaagccgctgaccgagcaggtccacgagcggccgatgctgttcgtg
ccgccgtgcatcaacaagtactacatcctcgacctgcagcccgacaactcggtgatccgc
tacaccgtggcgcaaggtcaccgcgtgttcgtgctgagctggcgcaaccccgacgagagc
ctggcggccaagacctgggacgactacaccgaagacgccgtcatcaaggcgatccgcgtg
gtgcaggaaatcggcggcacggacaccatcgacatgctgggcttctgcgtcggcggcacg
ctgctgacctgcgcgctggcggtgctggccgcacgcggcgagcagccggcagccagcgtc
acgctgctgacgagcttcctcgacttcagcgccaccggcatcctcgacctgttcatcgac
gaggcctcggtgcggctgcgcgagatcaccctgggcgccgacgcgcccaagggccccggg
ctgctcaagggcaaggaactcgccgcgaccttcagcttcctgcgcccgaacgacctggtc
tggaactacgtcgtcggcaactacctgaagggcgagacgccgccgccgttcgacctgctg
tactggaactccgacagcaccaacctgccgggtccgatgtactgctggtacctgcgcaac
acctacctcgaggacaagctcaaggtgccgggtgcgctcacggtctgcggcgagaaggtc
gacctcggcaagatcaaggcgccgttctacctgtacgcatcgcgcgaagaccacatcgtg
ccgtgggactcgtcgtacctgaacacccggatcctgaacggcaagctgcgcttcgtcatg
ggcgcctcgggccacattgccggcgtcatcaatccgccgaccaagaagaagcgcagccac
tggatcaacgacaagctgcccgagaccgcgcaagcctggcttgacggcgccaccgagcat
gccggcagctggtggccggattggtccgaatggctgaagggacacgccggcaagctcaag
gccgcgcccaagacctacggcaaccgcaagtacaagccgatcgagccggcacccggtcgt
tacgtcaagcagaaagtctga
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