Leptothrix cholodnii: Lcho_2217
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Entry
Lcho_2217 CDS
T00681
Name
(GenBank) protein of unknown function DUF344
KO
K22468
polyphosphate kinase [EC:
2.7.4.34
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00190
Oxidative phosphorylation
lch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Lcho_2217
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Lcho_2217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lch03019
]
Lcho_2217
Enzymes [BR:
lch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.34 GDP-polyphosphate phosphotransferase
Lcho_2217
Messenger RNA biogenesis [BR:
lch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Lcho_2217
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPK2
Resolvase
MeaB
Motif
Other DBs
NCBI-ProteinID:
ACB34483
UniProt:
B1Y3F5
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All DBs
Position
2420314..2421489
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AA seq
391 aa
AA seq
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MAKDQAGVAPPQPESPAPVRRKRSTPRPTTAGDTLASPGSLTAERDRVARRTSTTLTVQE
AVVTDLLNRAPGKRQVNESLRQLQTLMAGASPDEVQALRAALLSGPDALRAGTDPDIELS
ARWREGAYPYRNLLSRKSYEKQKYRLQVELLKLQAWVKETGARVVILFEGRDAAGKGGAI
KRFMEHLNPRGARVVALEKPSEVERGQWYFQRYIQHLPTRGEIVMFDRSWYNRAGVERVM
GFCSDAEYDEFLRQAPEFERQLVRSGVHLFKFWFSVSRAEQRRRFKERELHPLKQWKLSP
IDMASLDKWDDYTRAKEGMFVHCDTSDAPWTVIKSDCKKRARLNAMRYVLHRLPYTRREL
GTIGSVDPLIVGRPSLVPSAGEDQLAMGGVG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggatcaagccggcgtcgcgccaccccaacccgaaagccctgcgccggttcga
cgcaagcgcagcacgccgcggccgaccactgccggcgacaccctcgccagcccgggatcg
ctcacggccgaacgcgaccgcgtggcgcggcgcaccagcaccaccctgacggtgcaggag
gcggtggtgaccgacctgctgaaccgagcgcccggcaagcgtcaggtcaacgagtcgctg
cgccagttgcagacgctgatggccggcgcatcgcccgacgaggtgcaggcgctgcgcgcc
gcgctgctgtcggggcccgacgccttgcgtgccggcaccgacccggacatcgagctcagc
gcccgctggcgcgagggcgcctatccgtaccgcaacctgctgtcgcgcaagtcctacgag
aagcagaaataccgcctgcaggtcgagctgctgaagctgcaggcctgggtcaaggagacc
ggcgcgcgggtggtgatcctgttcgagggccgcgacgcggccggcaagggcggcgcgatc
aagcgcttcatggagcatctgaatccacgcggcgcgcgcgtggtggcgctcgaaaaaccc
agcgaggtcgagcgcggccagtggtacttccagcgctacatccagcacctgcccacgcgc
ggcgagatcgtgatgttcgatcgcagctggtacaaccgcgccggcgtcgagcgggtgatg
ggtttctgctccgatgccgagtacgacgagtttttgcgccaggcgccggagttcgagcgc
cagctggtgcgctcgggcgtgcacctgttcaagttctggttctcggtcagccgcgccgag
cagcgccgccgcttcaaggagcgcgagctgcacccgctcaagcagtggaagctcagcccg
atcgacatggcctcgctcgacaagtgggacgactacacccgtgccaaggagggcatgttc
gtgcactgcgacacctcggacgcgccgtggacggtgatcaagtcggactgcaagaagcgc
gcacgcctgaacgccatgcgctacgtgctgcaccggctgccgtacacccggcgtgaactc
ggcaccatcggctcggtcgacccgctgatcgtcggtcggccgtcgctggtgcccagcgcg
ggcgaggatcagctggcgatgggtggagtgggctga
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