Leptothrix cholodnii: Lcho_2884
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Entry
Lcho_2884 CDS
T00681
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00020
Citrate cycle (TCA cycle)
lch00785
Lipoic acid metabolism
lch01100
Metabolic pathways
lch01110
Biosynthesis of secondary metabolites
lch01120
Microbial metabolism in diverse environments
lch01200
Carbon metabolism
lch01210
2-Oxocarboxylic acid metabolism
Module
lch_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lch_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Lcho_2884
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Lcho_2884
Enzymes [BR:
lch01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Lcho_2884
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ACB35149
UniProt:
B1XYA4
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All DBs
Position
complement(3174696..3177548)
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AA seq
950 aa
AA seq
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MMQQYRTNSYLFGGNAPYVEEMYEAYLDNPGSVPDNWRAYFDALQHVPATDGTDSRDVAH
APVIESFAQRAKSNAFAVKASSTDLAVARKQVHVQSLIAAYRNVGARWADLDPLKRQERP
KIPELEPAFYDLTESDMDITFSATNTYFGKADMSLRQILQALRETYCSTLGAEFMHITDQ
TQKRWWQERLESIRAKPTFNVEQKKHILDRLTAAEGLERFLHTKYVGQKRFSLEGGESFI
AAMDELVQRAGEKGVQEIVIGMAHRGRLNVLVNTLGKMPKDLFAEFDHTAPEDLPAGDVK
YHQGFSSDISTPGGPVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDTIGAQVLPVLVHG
DSAFGGQGVNQETLALSETRGYSTGGTVHLIINNQIGFTTSDPRDLRSTLYCTDIVKMID
APVLHVNGDDPEAVVLATQLALEFRMAFRKDVVIDVICFRKLGHNEQDTPALTQPLMYKK
ISAHPGTRRLYADKLAAQGLGETIGDDMSKAYRAAMDEGRHTVDPVISNFKSKYAVDWVP
FLGKKWTDAADTAIPLTEWKRLAERLTTIPASVSPHPLVKKVFDDRAAMGRGEINVDWGM
GEHMAFASLVAAGYPVRLSGEDCGRGTFTHRHAVIHDQKREKWDEGTYIPLQHVGDNQAG
FTVIDSILSEEAVLGFEYGYAAAEPNTLTIWEAQFGDFANGAQVVIDQFIASGEVKWGRV
NGLTLMLPHGYEGQGPEHSSARLERFMQLAADTNMQIVQPTTASQIFHVLRRQMVRQFRK
PLVIMTPKSLLRNKDATSTLVEFTKGEFRTVIGELNTGIDAAKVKRVIACSGKVYYDLVK
KRDEKKSNDVAIIRVEQLYPFPHKAFANELKKYPNANDIVWCQDEPQNQGAWFFVQHYIH
ENMQDGQKLGYAGRPASASPAVGYAHLHQEQQKALLDQAFGKLKGFVLTK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcaatacaggacgaactcgtacctgttcgggggcaacgccccttacgtggaa
gagatgtacgaggcttacctcgacaacccaggctccgttccggacaactggcgcgcctac
ttcgacgcactccagcacgttcccgccaccgacggcaccgacagccgtgacgtggctcac
gcccccgtcatcgaatcgttcgcccagcgcgccaagtcgaatgccttcgccgtcaaggcc
agctcgaccgatctcgccgtcgcgcgcaagcaggttcacgtccagtcgctgatcgcggcc
taccgcaacgtcggtgcccgctgggccgatctcgacccgctcaagcgccaggagcgtccg
aagatccccgaactcgagccggcgttctacgacctgaccgagtccgacatggacatcacg
ttcagcgcgacgaacacctatttcggcaaggcggacatgtcgctgcgccagatcctgcag
gctctgcgcgagacctactgcagcacgctcggcgccgagttcatgcacatcaccgaccag
acgcagaagcgctggtggcaagagcggctcgagagcatccgtgccaagccgaccttcaat
gtcgagcagaagaagcacatcctcgaccgcctgaccgcggccgaaggcctggagcgcttc
ctccacaccaagtacgtcggccagaagcgcttctcgctcgaaggtggcgaaagcttcatc
gccgcgatggacgagctggtgcagcgtgccggcgagaagggcgtgcaggagatcgtcatc
ggcatggcccaccgcggccgcctgaacgtgctcgtcaacaccctgggcaagatgcccaag
gacctgttcgccgaattcgaccacaccgcgcccgaagacctgccggccggcgacgtcaag
taccaccagggcttcagctccgacatctcgaccccgggcggcccggtccacctgtcgctg
gccttcaacccctcgcacctggaaatcgtcaacccggtcgtcgaaggctcggtgcgtgcg
cgccaggaccgtcgcggcgataccatcggcgcccaggtgctgccggtgctggtgcacggc
gactcggccttcggtggccagggcgtcaaccaggaaaccctggcgctgtccgagacgcgt
ggttattccaccggcggcacggtgcacctgatcatcaacaaccagatcggcttcaccacc
agcgacccgcgcgacctgcgctcgacgctgtactgcaccgacatcgtcaagatgatcgat
gccccggtgctgcacgtgaacggtgacgatccggaagccgtcgtgctggccacccagctg
gcgctcgagttccgcatggccttccgcaaggacgtggtcatcgacgtcatctgcttccgc
aagctcggccacaacgagcaggacacgccggcgctgacccagccgctgatgtacaagaag
atcagtgcccaccccggcacccgtcgcctgtacgccgacaagctggccgcccagggtctg
ggcgagaccatcggcgacgacatgtccaaggcctatcgcgccgcgatggacgaaggccgt
cacacggtcgatccggtcatcagcaacttcaagagcaagtacgcggtcgactgggttccg
ttcctgggcaagaagtggaccgacgcggccgacaccgcgattccgctgaccgagtggaag
cgtctggccgagcgcctgaccaccattcccgccagcgtcagcccgcacccgctggtcaag
aaggtcttcgacgaccgcgccgcgatgggccgtggcgagatcaacgtcgactggggcatg
ggcgagcacatggcgtttgcctcgctggtggctgccgggtatccggtgcgcctgtcgggc
gaggactgcggccgtggcaccttcacgcaccgccatgccgtgatccatgatcagaagcgc
gagaagtgggacgaaggcacctacatcccgctgcagcacgtcggcgacaaccaggccggt
ttcaccgtcatcgactcgatcctgtcggaagaggcggtgctgggcttcgaatacggctac
gccgccgccgaacccaacacgctgacgatctgggaagcgcagttcggcgacttcgccaac
ggcgcgcaggtcgtgatcgaccagttcatcgcctcgggcgaagtcaagtggggccgcgtc
aacggcctgacgctgatgctgccgcacggctacgaaggccagggccccgagcacagctcg
gcacgcctggagcgcttcatgcagctggccgccgacaccaacatgcagatcgtgcagccg
accacggccagccagatcttccatgtgctgcgtcgccagatggtgcgccagttccgcaag
ccgctggtcatcatgacgccgaagtcgctgctgcgtaacaaggacgccacctcgacgctg
gtcgagttcaccaagggcgagttccgcaccgtcatcggcgagctcaataccggcatcgac
gcagccaaggtcaagcgcgtgatcgcctgttcgggcaaggtctattacgacctggtcaag
aagcgcgacgagaagaagagcaacgacgtggcgatcatccgcgtcgagcagctctatccc
ttcccgcacaaggccttcgccaacgagctcaagaagtacccgaacgcgaacgacatcgtg
tggtgccaggacgagccgcagaaccagggtgcctggttcttcgtgcagcactacatccac
gagaacatgcaggacggccagaagctcggctacgccggtcgccccgcatcggcttcgccg
gccgtgggttacgcccacctgcaccaggaacagcagaaggctctgctcgaccaggcattc
ggcaagctcaagggcttcgtcctgaccaagtga
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