Leptothrix cholodnii: Lcho_4180
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Entry
Lcho_4180 CDS
T00681
Name
(GenBank) putative RNA methylase
KO
K25137
23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.173
]
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lch03009
]
Lcho_4180
Enzymes [BR:
lch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
Lcho_4180
Ribosome biogenesis [BR:
lch03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Lcho_4180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
THUMP
MTS
Methyltransf_25
Methyltransf_11
Methyltransf_3
Motif
Other DBs
NCBI-ProteinID:
ACB36431
UniProt:
B1XYJ5
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All DBs
Position
4688500..4689822
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AA seq
440 aa
AA seq
DB search
MDCRAVNPTPLYLPCAAGVEPLLADEVRAILRAAGAEKAAESVQPGRAGVSLIGSPASAM
RLHLECRLAQRVLWQVAEGPYHDEHDLYDLARSVAWGDWITPRQSLRVDTTAVRSPLHSL
HFASLRIKDAVCDAMRDSHGERPDVDPRHPDLPLVLHLSDTHATLSIDLSGEALFKRGWR
EVQGEAPLKETLAAAMLAAAGWQGREADGPLLDPCCGAGTIAIEAAQIACGIAPGLQRTF
AFERLAPFRAEAQAWQQMKAEARARVHAPAVRIYAGDVSFRMTDFATRNAERAGVLHAID
FRTGDALQRPAPTESGVLMLNPPYGERIDAKGSGAARARDEAGDRLGPRADAGAREGFEG
GGTSGAFFSALAAHWKRNYSGWTAWVLSPDAKLPQAMRLKESRRVPMWNGPIECRLFRFD
LVAGSMRGPRNDAAGADLSR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggactgccgcgccgtgaatccgaccccgctctacctgccctgcgccgccggcgtcgaa
cccctgctggccgacgaggtgcgcgccatcctgcgcgccgccggtgccgagaaggccgcc
gaatcggtgcaaccgggccgcgccggtgtcagcctgatcggcagcccggccagcgcgatg
cgcctgcacctcgaatgccggctggcccagcgcgtgctgtggcaggtcgccgaaggcccg
taccacgacgaacacgacctctacgacctggcacgcagcgtggcctggggcgactggatc
acgccgcgccagagcctgcgcgtggacaccaccgccgtgcgctcgccgctgcacagcctg
cacttcgcctcgctgcgcatcaaggacgccgtctgcgacgccatgcgcgacagccacggc
gagcgccccgacgtcgacccgcgccaccccgacctgccgctggtgctgcacctgagcgac
acgcacgccacgctcagcatcgacctgagcggcgaggcgctgttcaagcgcggctggcgc
gaggtgcagggcgaggcaccgctgaaggaaaccctggccgccgcgatgctggccgccgcc
ggctggcagggccgcgaggcggacggcccgctgctcgacccctgctgcggcgccggcacc
atcgcgatcgaggccgcgcagatcgcctgcggcatcgcgcccggcctgcagcgcaccttc
gccttcgagcggctggcgccgttccgcgccgaggcacaggcctggcagcagatgaaggcc
gaggcccgcgcccgggtgcacgcgcccgcagtgcggatctatgctggcgacgtctcgttc
cgcatgaccgacttcgccacccgcaacgccgaacgcgccggcgtgctgcacgcgatcgac
ttcaggaccggcgacgcgctgcagcgcccggcgccgaccgaatccggcgtgctgatgctc
aacccgccctacggcgagcgcatcgacgccaagggcagcggcgccgcgcgggcccgcgac
gaagcgggcgaccggctcggcccgcgtgccgatgccggcgcgcgcgagggcttcgagggc
ggcggcacctcgggcgccttcttctcggcgctggccgcgcactggaagcgcaactacagc
ggctggaccgcctgggtactgagccccgacgccaagctgccgcaagccatgcgcctgaag
gaaagccgccgcgtgccgatgtggaacggcccgatcgaatgccggctgttccgcttcgac
ctggtcgccggctcgatgcgcggcccgcgcaacgacgcggccggtgccgacctgtcccgg
tga
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