Lacticaseibacillus chiayiensis: KG086_05590
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Entry
KG086_05590 CDS
T07576
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lchi
Lacticaseibacillus chiayiensis
Pathway
lchi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KG086_05590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lchi03400
]
KG086_05590
Enzymes [BR:
lchi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KG086_05590
DNA repair and recombination proteins [BR:
lchi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KG086_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
UvrD_C
IMS_HHH
UvrD-helicase
HHH
AAA_16
AAA_29
HTH_IclR
T2SSE
AAA_18
RecR_HhH
DUF3653
nSTAND3
AAA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QVI35768
LinkDB
All DBs
Position
1167738..1170203
Genome browser
AA seq
821 aa
AA seq
DB search
MDRREDSVTGRVKSIFFQNPTNFFKILLIDITGTTITWTEPDIVVTGTFGDIKEDETYTF
TGHVIDHPKYGQQFQADNYHVDRPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIN
QILDDPASLEGLGITAAKRKMLVDNLKTNQGMERVIIGLNDYGFTSNMAGRIYQQYKNDA
LEVIKQNPYQLINDIAGIGFTRADQIAAKLNIAPDSQLRLGGAVMDTLQRLTDGEGDTFV
ELRTLVTQTLDLLERARNIAVKPDAVGQAIVTLAKDNALVAEGKRIFPKQLYDSEWQIAR
QLKGLAEAGAKAEEPELPDIEKTLAAVQADTGIAYDEVQKKAIVTALRSPIFLLTGGPGT
GKTTVTDGIVRTYARLHDLSLDANQYDLDDPFPIMLAAPTGRAAKRISETTQLPASTIHR
LLGLGVDTQDFAPNDLPDGLLIIDEMSMVDTYLFRTLLTALHPGMQIVLVGDKDQLPSVG
PGQVFADLLRSGALPQAALTHVHRQDADSSIIPLAHAVNAGKLPDDFTQPQVDRSFLACT
PSQVPEVVGQVVKRAAVKQFSIADIQVLAPMYRGTAGIDRLNPMLQNILNPKHSARTKTV
HFGEIEYRIGDKILQLVNDPNQNVFNGEIGQIVGITLAKEAASKSDELTIDFDGNEITYK
RSDFSKITLAYATSIHKAQGSEFPMVILPLTLQSRRMLRRNLLYTAITRAKSFLILVGEL
AAFETAVGEVAVNRHTGLVQRLQQVFDMPGSQTTEESALSPSPLPLQSTQIDTNGSDSDN
KVRSAKTALHQLTPALAASQKIDPMIGMDGITPQMFMTKEN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggacaggcgtgaagacagtgtcactggtagggtcaaaagcattttctttcagaatccc
acgaatttttttaaaattctcctgattgacattacgggcacaacgattacttggaccgaa
ccggatattgtcgtgaccggaacgtttggggacatcaaagaagacgaaacttacacgttt
accggtcatgtgatcgatcatcctaaatatggtcaacaatttcaagcggataattatcat
gtcgaccggccaacgaataaaaccggtttaatcaattatctcagttcagataagttcccg
ggcatcgggccaaaaactgccgagaagatcatagataagcttggtgtagatgcgattaat
cagattcttgatgacccggcgtcgcttgaaggacttggcatcactgccgcaaagcgaaaa
atgcttgttgacaaccttaaaacgaatcagggcatggaacgcgtcatcatcggactgaac
gattatggtttcaccagtaatatggccggtcgcatttatcagcaatacaaaaatgacgcc
cttgaggtgattaagcaaaatccatatcaacttatcaatgatattgctggcatcggtttt
acccgtgccgatcaaattgctgccaaattgaacatcgcgccggattcgcaattgcgtctc
ggaggggccgtcatggacacgctgcaacgtctgaccgatggcgaaggggacacttttgtc
gaactgcgcacgctcgttactcagacgcttgatttgttagaacgggcacgaaatattgcc
gtcaagcctgatgctgttggccaggctattgtcactttggccaaagataatgcactggtt
gctgaaggtaaacggatttttcctaaacagctctatgactcagagtggcagattgcccgc
cagctgaagggattagccgaagcaggggctaaggctgaagaacctgaactacctgacatt
gaaaaaacattagctgcggtacaggcagacaccggcattgcttatgatgaggtccaaaaa
aaagcgatcgtcacggctttacgatccccgattttccttttgacgggcggccccggcacc
ggtaaaacgaccgtgacggatggcatcgtccgcacttatgcacgattgcatgatctctcg
ttagatgccaatcagtacgacttagatgatccgtttccaattatgttggcagccccgact
ggacgcgcagctaagcggatcagtgagacgactcagttaccggccagtactattcatcgg
ttattgggactgggcgtggatacgcaggactttgctcccaacgatctgcctgatgggctg
ttgattatcgatgagatgtcgatggtcgatacgtatttatttcggacgttgctgactgcg
cttcatccaggtatgcagattgtgctagtgggagataaggatcagctgcctagcgtcggt
ccgggacaggtttttgcggatcttttacgcagcggcgcgttgccccaagcagcattgacc
catgttcatcgccaagatgccgatagttcgatcattcctttagcccatgcggtgaacgcc
ggtaaacttcctgacgatttcacgcaaccacaagtcgatcgcagttttttggcatgcaca
cccagccaagtgccagaagtcgttggtcaggttgtgaagcgggcagccgttaagcagttt
tcgatcgctgatattcaggtgttggcaccaatgtatcgcggaacggcagggattgatcgc
ctcaatccaatgttgcagaatattttgaatcctaaacacagtgcgcggaccaaaaccgtc
cattttggcgaaatcgagtatcgaatcggcgataaaatcctccaactggtcaatgatcct
aaccagaacgtgtttaatggcgaaatcggccagattgtcgggatcacgttagcaaaggaa
gcagccagcaaaagcgatgaattgacgattgactttgacggcaatgagatcacttacaag
cgtagtgattttagcaaaatcacgctagcgtatgcgacgtcgattcacaaagcgcaaggg
agcgaatttccgatggtgattttgccgttaactttgcaaagtcggcgaatgttacgacgg
aacttgctttatactgccattactcgggcaaagtcattcctgattttggtaggcgaatta
gcggcttttgaaacagcggttggtgaagtggctgtcaatcgacatacggggttggttcaa
cggttgcaacaggtatttgacatgccaggatcgcaaacaactgaagaaagcgctttgtca
ccatcacctttgccgttacaatccacacaaattgacacgaatggttccgactcggataat
aaagttaggtctgccaaaactgcgcttcatcagttaacgccagcactggcagcctcgcag
aaaattgatccgatgattgggatggatggtataaccccacaaatgtttatgacgaaggag
aattaa
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