Leuconostoc citreum: LCK_01366
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Entry
LCK_01366 CDS
T00663
Name
(GenBank) Predicted hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lci
Leuconostoc citreum
Pathway
lci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCK_01366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lci03019
]
LCK_01366
Messenger RNA biogenesis [BR:
lci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCK_01366
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
ACA83190
UniProt:
B1N088
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Position
1433052..1434734
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AA seq
560 aa
AA seq
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MTYSVDIKPNEVAVYALGGLGEIGKNTYGIEYQDEIIVVDAGIKFPEDELLGIDYVIPDY
TYLVDNIDRVKALVITHGHEDHIGAIAYFLQAVNVPVYAGPLAMALIKNKLEEKQMLNRV
ELHEITDGTVLEFDQLNVEFFRTTHSIPDVFGVAVHTPVGTIVETGDFKFDLTPTTKQPP
NLWSMARLGEKGVLLMMSDSTNAERPEWTKSEAWVAKSVNRIFDKLEHGRIIFATFASNM
NRVRMATDAAIAHGRKIAVFGRSMESAVTNGRALGYLNIPDNMLVEQSEIKHIPDDELLI
LSTGSQGEPMAALARIAEGTHKQIRLKPKDNVIFSSSPIPGNTASVNAVINKLEEGGANV
IYGKVNNIHTSGHGGQEEQKLMLALMKPKYFMPVHGEYRMLKVHASLAHELDIPKDHTFI
LENGDVLALDGENARVAGHFPGDDTYIDGSGIGDIGSVVLHDRQKLSQDGLVVVTATIDL
KKKEILSGPDILSRGFVYMRESGELINEGRRIIFGTMRRIMNNSNASEADIRQAVIDDLS
RFLYKETARKPMILPMLIMI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacatattctgtagatatcaaacctaacgaagtcgcagtttatgcgctaggtggttta
ggcgagattggtaagaatacttatggtattgaatatcaagatgaaattatcgtcgttgac
gcgggtattaagttccccgaagacgaattacttggtattgactatgttattcccgactat
acttatttagtcgacaatatcgatcgcgtcaaagcacttgtcattactcacggacacgaa
gaccatattggtgctatcgcctactttttgcaagctgttaatgtgccagtttatgccggc
ccattagccatggctttaatcaagaacaaacttgaagaaaagcaaatgttaaaccgtgtt
gaactacacgaaattacggatggcactgttctagaatttgatcaactgaatgttgaattt
ttccgaacaacccattccattcctgatgtgtttggtgttgctgtacacacccctgttggc
actatcgtcgaaactggtgatttcaaatttgacctgacgccaacaacaaagcagccacct
aacctttggtcaatggcgcgtcttggtgaaaaaggcgtgttactaatgatgagtgactcg
accaacgcagagcgaccagagtggacgaaatctgaagcttgggttgcaaaatctgttaat
cgcatatttgacaagttggaacatggtcgcattatatttgcaacttttgcttctaatatg
aaccgtgttcgcatggcaactgatgcagcaattgctcatgggcgtaaaatagctgttttc
ggccgttcaatggaatctgccgtcacaaacggtcgtgcccttggttacttgaacatccct
gataacatgttggttgaacaatcagaaatcaaacatatacctgatgatgaattattaata
ctatctactggatcacagggcgaaccaatggccgctctagcacgtattgctgaaggtaca
cacaagcaaattcgtttgaagccaaaagataatgttattttctcatcttccccaatacca
ggaaataccgcttcggtcaatgctgtcatcaataagcttgaagaaggcggtgccaatgtt
atatatggtaaagtcaataacattcatacttctggtcatggcggtcaagaagaacagaaa
ttgatgttagcattaatgaagccaaagtactttatgccagttcacggtgaataccgtatg
ctaaaagtccatgcttctttggcacatgagttagatattccaaaagaccatactttcatc
ctagaaaatggtgatgtcttggctttggatggcgaaaacgctcgtgttgcaggtcatttt
cctggtgacgatacttatattgacggctcaggtattggtgatatcggttctgttgtacta
catgatcgtcaaaagttatcccaagacggcttagtggtggtcacagcgacaattgattta
aaaaagaaagaaattctatctggaccggatattttgtcacgtggctttgtttatatgcgt
gaatcgggcgaactcattaatgaaggtcgccgcattatttttggtacaatgcgtcgtatc
atgaataattcaaatgccagtgaagcagatattcgacaagctgtcattgatgacttatct
agattcctttataaagaaactgcacgcaagccaatgattctgccaatgttaattatgatt
taa
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