Latimeria chalumnae (coelacanth): 102345507
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Entry
102345507 CDS
T02913
Symbol
COL10A1
Name
(RefSeq) collagen type X alpha 1 chain
KO
K19479
collagen type X alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102345507
NCBI-ProteinID:
XP_006002994
LinkDB
All DBs
Position
Un
AA seq
617 aa
AA seq
DB search
MPIHGNPGPPGQAGPRGPPGPPGSPGKSGYGVQGPPGPSGPPGPQGYSASGKPGHPGSPG
KSGERGVPGIKGEPGHPGSQGPRGPLGPPGIPGPAGLVGIGKPGPEGRPGAAGARGEPGE
KGPPGSPGPQGPKGDAVFGAPGSPGQKGHPGLQGPPGPSGPARIGKTGRNGFPGAPGEKG
DPGLPGRPGQQGIKGHPGLPGSPGEMGIGKPGADGVSGLPGPPGLKGLQGPPGMPGSPGM
PGVGKSGVPGMKGNKGVDGHPGFPGPKGEPGLAGTPGLPGEPGKSGTPGPPGFNGLPGEI
GLPGPKGDPGQPGHKGIPGIKGEPGAPGSNGKSGYPGPSGPVGPKGPPGQPGPKGATGYS
GPPGLPGPTGHIGHKGMPGHNGEPGPIGPVGAPGPRGSIGPTGMPGRPGTKGEPGLPGLP
GSAGMSTKGLIGPLGPPGTPGPRGIDGQPGAPGPPGPPGPPGQMFPQRKMPDGFLKAGQP
VGLRQTECSAFSVYLSSNYPQASVPIKFDKTVYNGQQHYDPTTGTFTCRIPGLYYFAYHV
HAKGSDLWIALYKNGTPMTYTYDEYKRGFLDHSSGSVVLDLRENDQVWLQLPSTESSGFY
SSELIHSSFSGFLMCPT
NT seq
1856 nt
NT seq
+upstream
nt +downstream
nt
tgatgccaattcatggaaatccaggacccccagggcaagctgggccaagaggtcccccag
gtcctccaggttctccaggaaagtcaggatatggagtgcaaggaccaccaggaccttcag
gaccaccaggaccacaaggatattctgcttctggaaagccaggtcacccaggttcaccag
gaaaatcaggagaaaggggagtgcctgggattaaaggagagccagggcatcctgggtctc
aagggccaagagggccacttgggcctcccgggattcctggcccagctggacttgttggta
ttggtaaaccaggcccagaaggaaggcctggtgcagcaggagcaagaggcgagcctggag
aaaagggaccaccagggtctcctggccctcaaggtccaaagggagatgctgtatttggag
ctccaggaagtccaggtcagaaaggtcacccagggcttcaggggccaccaggaccatctg
gacctgctagaataggaaaaactggtaggaatggatttccaggagcaccaggtgaaaaag
gggatccaggtctccctggtaggccagggcagcaaggaattaaaggtcatccaggattac
ctggttcacctggagagatgggaataggaaagccaggtgcagatggtgtatcaggattac
caggccctcctggtttgaaaggtctacaagggcctccaggcatgcctgggtcacctggga
tgcctggtgtcggaaaatcgggtgtgccaggaatgaagggaaataaaggtgttgatggcc
atccaggttttcctggtccaaaaggggagccaggtctagctggtactccaggactacctg
gagagccaggaaaatctggaacacctggacctcctggctttaatggacttccaggtgaaa
ttggtttaccaggaccaaaaggtgatcctggacaacctgggcacaaaggcattccaggaa
ttaaaggtgagccaggagcgcccggttcaaatggaaaatcaggatatcccgggccatccg
gtccagtaggtcccaaaggcccacctggacagccaggtccaaaaggtgccactggatatt
cagggccacctggcctacctggtccaacaggtcacataggacataaagggatgccagggc
ataatggtgaaccaggtccaataggacctgttggagcaccaggtccaaggggttccattg
gacccacaggaatgccaggtcgaccaggcacaaaaggagaaccaggattgccagggcttc
caggttcagcaggaatgtcaactaaaggattaataggaccattggggccacctggtactc
ctggcccaaggggtatagatggtcagccaggagccccaggacctccaggtccaccaggcc
caccagggcaaatgtttccacaaagaaagatgccagatggtttcttgaaagcaggacagc
cagtaggcctgagacaaacggaatgttctgccttttctgtctatctttcaagtaattatc
cacaagcatcagtcccaataaaatttgacaaaacagtatataacggacaacaacactatg
acccaacaactggaacctttacatgtcggatacctggactttactactttgcctatcatg
tgcatgcaaagggatcagatctttggattgcactctataaaaatggcacgcctatgacat
atacatacgatgagtacaagagaggattccttgatcattcatcaggtagtgttgtgctgg
atctcagagaaaatgatcaagtatggctacagcttccaagcactgagtcttctggtttct
attcatctgaattaattcactcctccttttctggattcctaatgtgtccaacatga
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