Latimeria chalumnae (coelacanth): 102350439
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Entry
102350439 CDS
T02913
Symbol
SCUBE1
Name
(RefSeq) signal peptide, CUB domain and EGF like domain containing 1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
102350439 (SCUBE1)
Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102350439 (SCUBE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_3
EGF_CA
EGF
CUB
hEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
102350439
NCBI-ProteinID:
XP_014342705
LinkDB
All DBs
Position
Un
AA seq
1017 aa
AA seq
DB search
MGSVCFSWHFCLFFALLYTCRSTGSSGVPDVDECEDDTDDCHIDAFCQNTPNSYKCICKP
GYKGEGKQCEDIDECDNDYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECLDN
NGGCQQICVNTMGSYECQCKEGFFLSDNQHTCIHRSNEGMSCMNKDHGCAHICRETPKGG
VACECRPGFELAKNQRDCTLTCNYGNGGCQHTCDDTETGPECGCHQKYALHSDGKTCIEK
DEAAIESSEYNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTLQ
PDGKTCKDIDECLSNNGGCDHFCRNTVGSFECSCQKGYKLLTDERTCQDIDECSFERTCD
HTCINYPGSFECLCNKGYTLYGMTHCGDIDECSINNGSCHYGCLNTMGSYECFCPPGKRL
HWNKKDCVDVLRCQPNTKPLPKAQLICSKAGGYETCSLSCPSKTLFVAGSENSYTLSCGV
PMQQAKSQQKQNITVPSCADSLPAPIKQKARFKLKDAKCHLRPRSKEKLKDTYKPTITGG
PFPCTDNCQVTFVNLKCDPSKKKRRGRKSPPKEVSYITAEFEVEMMPGDISDSCNIDCAR
NKMEQKLQVAVKTLRKSINKQQFYVHFSGTEYEVAQKPAKAPESQEVCNTGQVLHNGKCV
SCNVGTYYSGEQDQCIPCSPGTYQDTKGQLSCEPCPNNDGQGSLGARNVSECAGQCYPGQ
FSHDGFRPCKPCPFGTYQPEAGRMLCFPCGGGLMTKYESAVSFHDCETKVHCSPGHYYNS
TTHRCIRCPLGTYQPEFGQNYCITCPGNTTTDFDGSTNVTHCKNQQCGGELGDYTGYIES
PNYPGDYPANVECTWNINPPPKRRILIVVPEIFLPIEDECGDVLVMRKSASPTSITTYET
CQTYERPIAFTSRSRKLWIQFKSNEGNSRKGFQVPYVTYDEDYQQLIEDIVRDGRLYASE
NHQEILKDKKLIKALFDVLAHPQNYFKYTAQESKEMFPRSFIKLLRSKVSRFLRPYK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgggctctgtttgtttttcatggcacttttgtttgtttttcgctctcttatatacttgc
aggtctacgggaagcagcggggtaccagatgttgatgaatgtgaagatgacacagacgac
tgccacattgatgcattttgccaaaatacacccaactcctacaaatgcatctgcaaacca
ggctataaaggagaagggaaacaatgtgaagacattgatgagtgtgataatgactacaat
ggtggttgcgttcatgaatgcatcaacattccaggcaactataggtgtacttgctatgat
ggattcatgctggcacatgatggacataactgtcttgatgttgatgaatgccttgataac
aatggtgggtgtcagcagatctgtgttaatactatgggtagctatgaatgtcagtgcaag
gaaggtttctttctaagtgacaatcagcacacctgtatccaccgttccaatgaaggcatg
agctgtatgaacaaagaccatggatgcgcacacatctgccgagagacccccaaaggtgga
gtagcttgcgaatgtaggcctgggtttgagcttgcaaaaaaccagagggactgcacatta
acctgcaactatgggaatggaggctgccaacacacctgtgatgacactgagacgggtcct
gaatgtggttgtcatcagaaatatgcgctacattcagatggcaaaacttgtatagagaag
gatgaggctgcaattgagagttctgagtacaatgccacgtcagtagctgatgtggacaag
cgggtgaaacggcggctactcatggaaacgtgtgctgtaaataatggaggctgtgaccga
acatgcaaagatacagcaacaggggtacgttgcagctgcccagttgggtttaccctgcag
cctgatggaaaaacatgcaaagacattgatgaatgcttgtcaaacaatgggggctgcgac
catttctgtaggaatacagttggcagctttgagtgtagctgtcagaagggctataaattg
ctaacagatgaacggacctgccaagatatagatgaatgttcctttgaaagaacctgtgac
catacctgcatcaactacccaggaagctttgaatgtctatgtaacaaaggctatacgctg
tatggaatgacacattgtggggacattgatgagtgcagcattaacaatggtagctgtcat
tatggatgcctcaacacaatgggaagctatgaatgtttctgtccacctggaaagaggcta
cattggaacaaaaaggattgtgttgatgtgctaagatgtcaaccaaatacaaaaccttta
ccgaaggcacagcttatctgtagtaaggctggaggttatgagacctgttctttgtcatgt
ccatcaaaaacactgtttgtagcaggttctgaaaatagctatactttaagctgtggagtt
ccaatgcagcaggccaaatcccaacaaaaacaaaatatcactgtacccagctgtgcagat
tctttacctgcaccaataaagcaaaaagctcggtttaaactcaaagatgcaaagtgtcac
ctacggccgcgcagcaaagaaaagcttaaagacacatataaaccaaccattacaggaggt
ccattcccttgtacagacaactgccaggtgacattcgtgaatctcaaatgtgacccatcc
aagaaaaaaagacgtgggcggaagtctccaccaaaagaggtatcatatattacagcagag
tttgaagtggaaatgatgccgggggacatttcagattcctgtaatattgactgtgcacgc
aacaaaatggaacagaagctgcaagtagcagttaaaacattaagaaagtctataaacaag
cagcagttttacgttcacttttctggaacagagtatgaagttgctcagaaaccagcaaag
gctcccgagagccaagaggtgtgtaacacaggacaagtgctacacaatggaaagtgtgtg
agttgtaatgtgggcacctattacagtggagaacaggatcaatgtattccttgctcccct
gggacatatcaagatacaaaaggacagctttcttgtgaaccttgcccaaataatgatgga
cagggatccttaggagctcggaatgtatcagaatgtgcaggtcagtgttatccaggacaa
ttttcccatgatggattcaggccttgtaagccttgtccttttggtacctaccagcctgaa
gcagggcgaatgctgtgttttccatgtggaggtgggctgatgaccaaatatgaaagtgct
gtttcatttcatgattgtgaaaccaaagttcattgttcccctggtcattattataactct
accacacatagatgtatcagatgcccactggggacataccagccagagtttggtcaaaat
tactgcataacctgtcctggaaatacaactacagattttgatggatccacaaatgtcacc
cattgtaaaaaccaacagtgtggaggagaacttggagattacactggttatattgaatca
cccaactatcctggtgattaccctgctaatgttgagtgtacttggaatataaacccgcca
ccaaagagaagaattcttattgtagtgcctgagatctttcttcccattgaagatgagtgt
ggggatgttttagtcatgagaaaaagtgcttcacctacctcaattacaacatacgaaact
tgccagacctatgaaagacccatagcctttacatctaggtcccggaaattatggatacaa
tttaaatctaatgaaggaaacagtcgcaaaggattccaagtgccttatgtcacttacgat
gaggattatcagcagttaatagaagacattgtacgtgacggaaggctgtatgcttcagaa
aatcatcaagaaattttaaaagacaagaaactaattaaagcactctttgatgtattagca
caccctcagaactatttcaagtatactgcacaagaatcaaaggagatgtttccaaggtca
tttataaaactgcttcggtccaaagtttccaggtttctacgaccatacaaatag
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