Latimeria chalumnae (coelacanth): 102353937
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Entry
102353937 CDS
T02913
Symbol
EXOSC5
Name
(RefSeq) exosome component 5
KO
K12590
exosome complex component RRP46
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102353937 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102353937 (EXOSC5)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102353937 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102353937
NCBI-ProteinID:
XP_014349115
LinkDB
All DBs
Position
Un
AA seq
217 aa
AA seq
DB search
METGGAGCALRPFGCEQNLLSRPDGSATFVQGDTTVLAGVYGPAEVKFSKEIYDKATVEV
ILKPKVGMAAISEKIKEQMIRKTCEAVILTALHPRTSVTVILQIVHDAGALLSCCLNAAC
MALMDAGLPMKSLFCGVSCGIDLDKNILLDPVAKQEKECRSLLTFAIDSTENKVLMSSTS
GTYSIEELQHCIATCQKAAEKIFQFYRDSVRRKYSKS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggcggagcgggctgcgcgctcaggccgttcgggtgcgagcagaacctgctc
tcccgacccgacggctccgccaccttcgtgcaaggagatacaacggtcttggctggagta
tatggaccggcagaagtgaagttcagtaaagagatctacgacaaagcaacggtggaggtg
atcttgaaaccaaaagtaggaatggcagctataagcgagaagattaaggagcagatgatc
agaaagacgtgtgaagctgtgattctgacggccctgcacccccggacctctgtcactgtg
attctgcagattgtccacgacgccggtgctctgctgtcctgttgtttaaacgctgcttgc
atggccctgatggatgctggtctcccgatgaagtccttgttctgcggggtttcgtgtggc
attgatctcgacaagaacatactgctcgatcccgtagccaaacaggaaaaggaatgtcgg
tcccttctgacctttgcgatagacagcactgagaacaaggtgctgatgtcctcaacgagt
ggtacctacagcatagaagagctgcagcactgtatagctacctgtcagaaagcagcggag
aagatttttcagttttatagagacagcgtcagaaggaaatactcgaaatcatga
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integrated database retrieval system