Latimeria chalumnae (coelacanth): 102357880
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Entry
102357880 CDS
T02913
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102357880 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcm03036
]
102357880 (HDAC4)
Enzymes [BR:
lcm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102357880 (HDAC4)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102357880 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
102357880
NCBI-ProteinID:
XP_014343855
Ensembl:
ENSLACG00000007465
LinkDB
All DBs
Position
Un
AA seq
1089 aa
AA seq
DB search
MSSPSHPDGVSSCDQSVELLKPSRVNHIPGTVDVSAARPLQVAPNTAPMDLRLDHQFSVP
VAESTLRDQQLQQELLALKQKQQVQRQLLIAEFQRQHEQLSRQHEAQLHEHIKQQQELLA
MKHQQELMEHQRKMEQHRQEQELEKQQREHKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCMSSDPRFWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDPKDDFP
LRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGPGVTILKKRPLDVTDSVCNSAPGSGP
SSPNNSSNNISTENGIAGSVTNIPVEPNLVHKLVTREGSVTQLSLYTSPSLPNITLGLPA
STPSSVSDKAASGQQEAERLAIPALQQRLQLFPGSPLTPYLSSAALERDGGTNHNPLLQH
MVLLEQSAAQNPLVTDWYLSGLGTLPLHAQSLVGTERVSPSIHKLRQHRPLGRTQSAPLP
QNAQALQQLVIQQQHQQFLEKHKQQFQQQQLHLNKMIPKANEPARQHESHPEETEEELRE
HQALVEDPYGDQSTGQKERRVLNLVKGVQVKQEPIESDGEEAEQQQMEQEKRQTDQDLLF
RQQALLLEQQRIHQLRNYQASMEATGMSVTFGGHRPLSRAQSSPASATFPITVQEPPAKP
RFTTGLVYDTLMLKHQCTCGSTNSHPEHAGRVQSIWSRLQETGLRSKCECIRGRKATLEE
LQTVHSEAHTLLYGTNPLNRQKLDSSLTPMFVRLPCGGVGVDSDTIWNEVHSSSAARLAV
GSVVELVFKVASRELKNGFAVVRPPGHHAEESTPMGFCYFNSVSIAAKLLQQRLNVSKIL
IVDWDVHHGNGTQQAFYNDPSVLYMSIHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFT
GGLDPPMADAEYLAAFRTILMPIANEFAPDVVLVSAGFDAVEGHPAPLGGYKVSAKCFGY
LTNQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELEPLPQDVLQNRPNSNAVV
SMERVIEIQSKYWPCVQRYSSSVGLSLIEAQKRETEEAETVTAMASLSMGVKPADRRPED
EPMEEEPPL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctccccaagtcacccagatggagtgtccagctgtgaccagtctgtggagctgctg
aagccatcccgagtcaatcacattcctggtaccgttgatgtgagcgcagcacggcccctg
caagttgcacccaacactgcccccatggatctccggttggaccaccagttctctgtgcca
gtggccgaatccacactccgggaccagcaactacaacaggagctcctggccctgaaacag
aaacaacaagtccagcggcagctccttattgccgagtttcagagacaacatgagcaactg
tcccgccaacatgaggcccagctccatgagcacatcaagcagcaacaggagttgttagcc
atgaaacaccagcaggagctgatggaacaccagcggaagatggagcagcatcgacaggaa
caagagctggagaaacagcagagagagcacaagctacagcagctcaagaacaaggagaag
ggaaaagaaagtgccgtggccagtactgaggtaaagatgaagctacaggaatttgttctg
aataaaaagaaagcattggcccatcggaatttgaaccactgcatgtccagcgacccccgc
ttctggtacgggaaaacacaacacagttctctggaccagagctctcctccccaaagtggg
gtgtcagccagttataatcacccagtgttggggatgtatgaccccaaagatgatttccct
ctaagaaagacagcgtctgaacccaacttgaaagtgcgttccaggctaaaacagaaggtg
gcagagaggagaagcagccccttgctacggaggaaagatggtccaggggttactattctt
aaaaagcggccactggatgtaactgactcagtgtgtaacagcgcccctggctctggcccg
agctctcctaacaacagctccaataacatcagtacagaaaatggaattgctggatcagtg
accaacatcccagtagagcccaatttggttcacaagctggtgactcgggaagggtcagtg
acacagctgtctttgtatacatccccctcactgcccaatatcacacttggactgcctgcc
agcacgccatccagtgtaagtgacaaagctgcctcgggacagcaggaggcagagagactg
gccatccctgccttacagcagcgtttacagctcttccctggctcccccctgaccccctac
ctgagcagcgcagcactggagagggatggcggaactaatcacaacccgcttctacaacac
atggttctactggaacagtctgcggcacagaaccccctggttactgactggtatctttca
ggcctcgggacattgcccctccacgcacaatccctggtgggcacagagcgggtgtctccc
tccatccacaagctgcgtcagcaccggccgttggggcggacgcagtcggcgcccctccct
cagaatgcgcaggccctgcagcagttggtgatacagcagcagcatcagcagttcctggag
aaacacaaacagcagttccagcaacagcaacttcacctcaacaagatgattcctaaagca
aatgaaccagcccgtcagcacgagagccacccagaggagacggaggaggagctgcgggag
caccaggcactggtggaggatccctatggggaccaaagcactggtcagaaggaaaggagg
gtgctcaacttagtcaaaggggtgcaggtgaaacaggagcccattgagagtgatggagaa
gaggctgagcagcaacagatggaacaggagaagaggcagactgaccaggacctgctcttc
agacagcaggccctcttactggaacagcagcgtatccaccagctgaggaactaccaggca
tccatggaggcaaccggaatgtctgtcaccttcggaggccaccgcccactctcccgtgca
cagtcctctcctgcctctgctacattccctatcaccgtccaggagccgcctgctaaaccc
aggttcaccacaggtctggtctatgacacccttatgctgaagcaccagtgtacctgtggc
agcacaaacagccatccagagcatgctgggagagtccaaagcatctggtctcggctacaa
gagacaggactgcgtagcaagtgtgagtgtatccgtggaaggaaggcaactttggaggaa
cttcagaccgtccactcagaagcccatacactgctttacggcacaaatccactgaaccga
cagaaactggacagttccctcacgccgatgtttgtaagactcccctgcggcggtgtgggg
gtggacagtgacacgatttggaatgaagttcactcatcgagtgcagcccggctagctgtg
ggctcagtagtagagctggtgttcaaggtggcatcaagagaactgaagaatggttttgct
gtagtgcgccctcctggtcatcatgcagaagagagcacgcccatgggcttctgctatttc
aattcggtttcaattgcagccaaactcctccagcagagactaaatgtgagcaagatcctc
attgtggactgggatgtacatcatggcaacggcacccaacaggcattctacaatgacccc
agcgtcctctatatgtcaatacatcgttatgatgatggaaactttttcccaggaagtgga
gcgccggatgaggttggcacaggagcaggtgttggttttaacgttaacatggcgttcacc
ggagggctggatccgcccatggctgatgcagagtacctggcagcatttaggacaatattg
atgccaattgcgaatgagtttgcacctgatgtggtgttggtgtcggctgggttcgatgca
gtggaagggcaccctgcccccctcggaggttacaaagtatctgccaaatgtttcgggtac
ctgacaaaccagctgatgggactggctgggggccgcgttgtgctggctctggaggggggt
cacgacctgactgccatttgcgatgcatctgaagcatgtgtttctgctttgctgggaaat
gagctggagcctctcccccaggatgtcctgcagaatcgaccgaactctaatgccgtggtg
tccatggagcgtgtcattgagatccagagtaaatactggccttgtgtgcagcgttactct
tcctccgtgggactttctctgattgaggcacaaaaacgcgagacagaagaagccgagact
gtaacagccatggcctctctatccatgggggtcaaacctgccgacagaaggccagaggac
gagccaatggaggaggagccgcccctgtaa
DBGET
integrated database retrieval system
