Latimeria chalumnae (coelacanth): 102358330 Help Entry 102358330         CDS       T02913                                  Symbol COL16A1 Name (RefSeq) collagen type XVI alpha 1 chain   KO K24339   collagen type XVI alpha Organism lcm  Latimeria chalumnae (coelacanth) SSDB OrthologParalogGFIT Motif Pfam:  Collagen Laminin_G_3 Motif Other DBs NCBI-GeneID:  102358330 NCBI-ProteinID:  XP_005997287 Ensembl:  ENSLACG00000010087 LinkDB All DBs Position Un AA seq 1635 aa AA seqDB search MWIIWPSVLWILASVQSCKGGLLVSKREIRCPVLQVEGWKFHQGIQGRVNASGFNLVRRF SLLKTSSIKKIRNPNGPLIMRLGGVSLVKPTVQLFPHGLPNEFSFVTTILLKKKTVKTNW FIIQMVDQEGYPQLSLGINGVDKSLEFKARGLHEEYVSCIFNGEGVASLFNLQWHKIALS IQATAVSVHVDCSSIESKPIKERKSINTEGHTIIGLGADSGKSVDFDVQQIMIYCSPEIA VQEACCELPGARCSPEASKSRRNADIKHNNLIEIAPQVDGKVYTRCFCLEEETLGRKGES EAVAQTTGLQCPPCPRRSLDENDAAILSGSKGTKGDRGVAGMHGSKGEKGERGEDCIQAS PGKPGECKSGRKGDKGNQGTTGFPGMDGPQGPKGDKGDKGDPGAHGMSGIPGRDGKPGEI CVIGPKGHKGEPGLVGPEGLAGEPGPPGVPGLPGRGSPGRPGNPGGPPGLKGDEGDEGKP GPEGPIGKPGKPGVTGPKGEKGNPCEVCPSIPEGLKGMISLSGKPGPKGEPGPPGLVEPG LTGLPGLKGQKGEPATGSIKGEKGDPCEVCPSLTTGPAGLQNGVGLPGKVGPKGDPGPPG IGIPGKKGETGLQGNKGDKGNPGDRGPSGKTGKPGEPGLPGIKGFRGDQGFSGEPGVPGV QGIKGEKGDSCTVCPALPPEAKVQTTIQSQPGAPGEKGKPGKPGKSGAKGEKGETGSSGD SGAPGMAGVPGLAGETGVRGLPGVKGEKGDACEVCPAIPEKIGDVIRLAGKPGAKGDPGP PGIGEPGRPGKPGLPGVPGPVGPKGIKGDQGLPGLGLPGSQGEDGERGLPGTAGLPGVEG PPGPQGPKGVKGEAGKEGPRGLPGLPGTSLPGPPGRDGEWGRPGIPGEDGIPGENGLKGD KGDPGECSCVSVPRVDPGNTGKPGAPGAWVPGISWQTGPQGPPGPPGPPGPPGPPGRQGI PGTDGLPGSPGPPGDFSSPPLSLERNLSEIKNICGDCMQGLPGVPGISGTKGEKGEQGQP GASGAENCEKCFAAIPPAEEPRVDNKQENGCPGVPGHPGVPGLPGEKGEQGPPGSRGLQG PPGPTGPPGFPGSPGSSGLPGLQGERGVSGPPGEKGQLGPPGLPGYPGAMGPPGLPGIKG ERGSTGSPGEKGELGPPGFPGSPGSAGPAGPPGERGTAGQPGEKGDQGFQGQPGFPGPPG PPGFPGKAGPTGPPGPPAEKGSEGMRGATGPSGPPGSPGSPGIQGPPGPEGYEGKDGKPG LRGEPGPPGPPGSMGIPGFKGKTGHRGFPGLKGELGPGGPPGSAGRPGMEGDPGPPGPQG PSGPPGHVGEPGSSGQPGQPGAPGVGQKGDRGPAGEKGLPGLHGPPGNPGLPGLIGEPGS DGPVGKEGSPGKPGELGEPGKKGEPGTSGGRGLPGEKGRAGMPGGPGKSGSMGPIGPAGP RGERGSPGSPGLTGAPGTPGLPGTMADTMDYDAIKRFIRQEVIKLFDERMGYYAARVQLP VEMVSAPGRPGPPGKEGVAGRPGSPGAPGMPGQIGREGRQGLPGQKGIPGPRGEKGDRGI GLSGEQGPPGPPGPLGPPGYGKMGPPGPMGQQGIPGVPGPPGSSGQPGKQGRCNPSDCFS MMPMEQYESKSMKGP NT seq 4908 nt NT seq  +upstreamnt  +downstreamnt atgtggattatttggccctctgtactttggatacttgcttctgttcagtcctgcaaagga ggcctgcttgtttcaaaaagagagattcggtgtcctgtgttacaagtcgagggatggaaa ttccatcaaggaatacaaggacgtgtcaatgcttcaggatttaatctagttagaaggttt tctcttctaaagacttcgtccatcaagaagattcgaaacccaaatggtcctctgataatg aggttgggaggtgtatcactagtgaagccaacagtgcagctctttcctcatggattgcca aatgaattcagctttgtgacgacaatcctgttgaagaagaagaccgtgaaaacaaactgg ttcattattcagatggttgaccaggagggctacccccagctctcactgggaatcaatggg gttgacaaaagcttggagttcaaagccaggggtctgcacgaggagtatgtgtcctgtatc tttaatggggagggagtggcctccttgttcaatctccagtggcacaagattgccctcagc atacaggcaacagctgtctctgttcatgtggactgcagctccatcgaatccaaaccaata aaagaaaggaagagcatcaatactgagggccacaccataattggccttggggctgacagt ggcaaatctgtggattttgatgttcagcaaataatgatttactgcagtcctgagatagct gtacaggaagcctgctgtgaactgccaggggcccggtgctcacctgaggcatcaaagagc aggcgaaatgcagacattaaacacaacaacctcatcgagatagcccctcaagtggatgga aaagtctacaccaggtgcttctgcttggaagaggagacccttggaaggaagggtgaaagt gaagcagtagctcaaaccactgggctccaatgtcctccttgccctcgtaggtctttggat gaaaatgatgcagccattttgtctggctctaagggtacaaaaggagaccgtggagtagcg ggaatgcatggaagcaaaggagaaaagggagaaaggggtgaagactgtattcaagcatct ccaggaaagccaggagagtgtaaaagtggcaggaagggtgacaaaggaaaccagggtact acgggatttcctgggatggatgggccacaaggacctaagggagataaaggtgacaaggga gacccaggtgctcatgggatgtctggtatcccaggccgtgatggtaaacctggagagatt tgtgtcattggcccaaagggacataagggagagcctggattggttggccctgaagggctc gctggagagccgggaccccctggggttccgggactaccaggacgagggtctccaggaagg ccaggaaaccctgggggcccacctggacttaagggagacgagggtgatgaaggaaaacca gggcctgaaggtccaataggaaagccgggcaaaccaggtgtaactggtccaaaaggagag aagggaaacccatgtgaagtttgtccttccattcctgagggacttaagggtatgattagc ctcagtggaaagccaggacccaaaggggaacccggccccccagggctagtagaacctggt ctaacaggtcttcctgggcttaaaggacagaagggggaaccagcaactggtagtatcaaa ggagaaaagggggatccctgtgaggtttgcccatcacttaccacaggacctgctggactg cagaatggggtggggttaccaggaaaagtcggtcccaaaggggatcccggacccccaggg ataggaatacctgggaagaagggtgagacaggacttcaaggaaataagggagacaaggga aatcctggagacaggggaccctcgggtaaaacaggtaaaccaggagagccaggattacct ggaattaagggattcagaggagatcagggcttttcaggagaaccaggtgttcccggagtt caaggcatcaaaggtgaaaagggagattcatgtactgtatgcccagctttgccaccagaa gctaaagtgcagacgaccatccagagccagccaggtgccccaggtgaaaaagggaaacct ggcaaaccaggaaagtctggggcaaaaggagagaagggtgaaacaggaagctcaggtgat tccggagcaccaggcatggcaggtgtacctggtctggcaggagagacaggtgtcagaggt ttgcctggagtaaaaggtgaaaagggagatgcttgtgaagtgtgtcccgccattccagag aaaattggagatgtgatcagacttgcagggaagccaggagccaaaggagaccctggcccc ccggggataggagagcctggaagacccggtaaaccaggacttccaggggtaccaggacca gtggggccaaagggtataaaaggggatcaaggacttccaggactaggcttgcctggatca cagggtgaagatggtgaaagaggattacctggaacagctgggcttcctggtgtggaagga ccacctggccctcaggggccaaagggagtaaagggagaagctggaaaagaaggcccccgg gggcttccagggctaccaggaaccagcctacctggaccaccaggccgtgatggagaatgg ggtaggccggggatcccaggtgaagatggcattcctggtgaaaatggtttgaagggtgat aagggagaccctggtgaatgctcctgtgtgagtgtccctcgggtagacccaggcaacact ggcaagcctggtgctcctggtgcatgggttcctggaatctcctggcagactggtcctcag ggtccaccaggtcctcctggtccaccaggaccacctggcccaccgggtcgacagggaatc cctggaactgatgggttgccaggatctcccggtcctccgggagatttttcttctccacct ctgagcttagaaagaaacttgtctgaaatcaagaatatctgtggtgactgtatgcaaggt cttcctggagtgcctggaatctctggaacaaaaggagagaagggggaacaaggacagcct ggagcatctggtgctgaaaactgtgaaaagtgttttgctgccattccaccagcagaggaa ccaagggtagacaataagcaagaaaacggctgtcctggagtacctggccaccctggagta ccgggtctaccaggagaaaaaggagagcagggtcctcctggttctagaggcctccaagga cctccaggccctactggccctccaggttttcctggctcacctggctcttctggattacct ggacttcaaggggagcgtggcgtatctggcccaccaggagagaaaggacagctgggtcca ccagggttgcctggttacccaggagctatgggcccacctggcctacctggaatcaaaggt gaacgtggttctactgggtctcctggagagaagggggaattgggtccacctggatttcct ggatcccctggctctgcaggcccagctggacctccaggtgagagaggtacagcaggacaa cccggagaaaaaggagatcagggatttcagggtcagcctggttttcctggacctccgggt ccccctggttttccaggtaaagccggaccaacaggtcctccaggccctcctgctgagaag ggaagtgaaggaatgaggggtgctacaggaccatcaggccctcctggctcgcctggttct cctggaatacagggacctcctggacctgaaggttatgagggaaaggatggaaaaccaggt ttgaggggagagcctggaccacctggccctccaggatcaatgggcattccaggtttcaaa ggaaaaacaggacacagaggttttcctggactaaaaggcgagctaggaccaggtggaccc ccaggaagtgctggaaggccaggtatggagggtgatccaggacctccagggccacaaggt ccctccgggcctcctggtcatgtgggtgaaccagggtcctcaggtcaacctggacagcct ggagcccccggtgttggacaaaagggagaccgaggaccagctggtgagaaaggattgcca ggcttgcatggcccgccagggaacccaggcctccctggacttattggagagcctggcagt gatggaccagttggaaaagagggctcaccaggaaagccaggagaactgggggaacctggt aagaagggagagccagggacttcaggtggaaggggacttccaggagaaaaaggaagagct ggaatgccaggaggccccggaaagagtggctccatgggaccaattgggccagctggccct cggggagagagaggatcccctggttcgccaggccttacaggagcaccagggacaccaggg cttccaggaacaatggcagatacaatggattatgatgcaatcaagagatttataagacaa gaagtgataaaattatttgatgagagaatgggatactatgctgcaagagtacagttgcca gtagagatggtgtctgccccggggaggccgggtccccctggaaaggaaggagtggcagga cgtcctggatctccaggagccccaggcatgccaggacaaattgggcgagaagggcgacaa ggtctacctggacagaaaggtatacctggtcctagaggtgaaaaaggggatcgtggaatt ggtctctcaggagaacagggcccacctggtccaccaggtccccttgggcctccaggatat ggtaaaatgggccctcctgggccaatgggccaacagggtataccaggagttccaggcccc ccaggctcctctggccagccaggaaaacaaggccgctgcaatccttcagactgcttcagc atgatgcccatggagcagtacgagtcgaagagcatgaaaggaccttga

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