Latimeria chalumnae (coelacanth): 102364505 Help Entry 102364505         CDS       T02913                                  Symbol SYNPO Name (RefSeq) synaptopodin   KO K21112   synaptopodin Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm04530   Tight junction Brite KEGG Orthology (KO) [BR:lcm00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     102364505 (SYNPO) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Calsarcin Motif Other DBs NCBI-GeneID:  102364505 NCBI-ProteinID:  XP_005988350 LinkDB All DBs Position Un AA seq 1129 aa AA seqDB search MLRLLSEASGVQSRTNGPFDVNGHSFSARLPLAAGCLVGCTDKAQMQEGAGTHSCGFAEE MKNDELAGRTEERATGGVCLFPQKQQAESLQEESAERLFETQRKTLDGDAEKGEDPTRGS ESSNARTEAMSVQVGLVERVGMGTAPSEMLRSANETKADNPQEWKVVRVKPVVVSSIGQP KKPNLSRSVSLSEKELREAKARSQRIAAQLTTPPSSNSRGVQLFNRRKQRVSEFTLESYG KSRQESVEGGSQGPLRSNSATCEKGVIERPPLETKNVTSTSPSQDRSAPYLERKPSANDV MEENRDNTNDAEEVTKPLLPAIENVRAEDTAAVEINTGLCTVPVTDETEQDPISVDLNNG STGRPTNELHESRTEFSEHVVPVSNGVNAIQIKKSNESPVSAPKQVTIINRTARPFGSPV PAETNFPKESSSTVVFAPPLIQATRQFGSPSPVDVDLPKGNNPTVNIASPLIQTARQLGS PSPVEASLPRENSSTVDLAPTLIQARPFGSPSSIEAHLPKEGDSTVDFLPPLIQTASISS PPRLTRVLSPPTLMTYSSSIEFRPTYEQESKYNERKSAPKEKTGILDEAIERRAAKKSMF TFREKPKVSPNPELLSLVQSSDEKKKHKEQREATGDDEHLALGAEASNFLHESTSKHRTP PSDSDNVPEWSSCLKTPERRVMLQPKPPQTLTEVKGKGAELFAKRQSRMEKYVVESPAVT GGPLRPPSPTMSLPPSWKYSNNQTRLRCMPSPAHPPFTSSRTFKARPSMYLNNGTSPVEN GSSRKESEIAKHQPYQLNSSLFILSPSKDPVQSLPRAAPPPKPRVFDSTPFAKQNSCPFN HPPPSPLFDCPTPFRASRQLSSPLSPASPNSTGMQDFRPSPGVPVEAPHSPQVLSPPIFR VSSPRTKMEFQAPRPSFSARDAGIEAQVRRESLPINHTWTPNSVRRMSSLEACPASTRAP ALREGRVSPAMSPSPTSPASPPWVQRSQSPLAKNPNNKRMVTLLAKNIINAAKRKSSLST SPGASCQGSPVSPPSNACLSSGSQRVSVSPFNRIITTQSPTVLSPPHTPLQMTRSPVKLY STRSLTDSDISIDSEDSGTKSPGTISYNICPRGWTGSLRSKRGSVTSEA NT seq 3390 nt NT seq  +upstreamnt  +downstreamnt atgttgagattgttatcagaagcctcgggagttcagtccaggactaatggaccctttgat gtgaatggacattcctttagtgcaagactcccactggcggctggttgcttggtgggctgc acagacaaggcccagatgcaggagggggccgggactcattcctgtggttttgctgaagag atgaaaaacgatgaacttgccgggcgaacagaggagcgagctacgggaggcgtctgcctc ttccctcaaaagcaacaagccgagagcttgcaggaagagagcgcggagagactgttcgag acacagcggaagactctggatggagacgcggagaagggtgaagatcccaccagaggctcc gagagttctaatgcccgcacagaggccatgtcagtccaagtagggttggttgaaagagtg ggaatgggcacggctccttccgagatgcttcgctctgccaacgagaccaaggctgacaat ccgcaggagtggaaggtcgttcgggtcaagcctgttgtggtctccagcataggacagccc aagaagcctaatctgtctagaagcgtaagcctttcagaaaaggagctcagagaggcaaaa gccaggagtcagagaattgctgcccagttgaccaccccaccaagcagcaattcccgaggg gttcagctcttcaacagacgcaagcagagggtcagcgagtttactttggaaagctatggg aagagcagacaggagtctgtagaggggggcagccaagggcctttacgaagcaacagcgca acatgtgaaaaaggagtcatcgaaaggcctcccttagaaacaaagaacgtgacgagcact tctccttctcaagaccgcagcgcaccttatctggaaaggaagccttcagcaaacgacgtc atggaggaaaacagagataacacaaacgatgctgaggaggtaacaaaacctctgctcccg gcaattgagaacgtccgtgcagaagatacagcggcagtggaaattaatactgggttatgc actgtaccggttactgatgaaaccgagcaggatccaataagtgtagatttaaacaatggc tcgacaggacgaccaaccaatgagttgcatgaatctaggacagaattttctgaacatgtt gtgcctgttagtaacggtgtcaatgcgatccaaatcaagaaatccaatgaaagtccagta tctgcgcccaaacaagtaacaataataaacagaacagcaagaccgttcggctctccagtt ccagcagagacaaactttccaaaggagagtagttctactgttgtctttgctccacccctt atccaagcaacaaggcagtttggctctccatctccagttgatgtggaccttccaaaggga aataaccctactgtgaacattgcttcaccccttattcagacagcgagacagcttggatct ccatctcccgtggaagcgagccttcccagggagaacagttctactgtggaccttgctcca acccttatccaagcgagaccatttgggtctccatcttcaattgaggcacaccttccaaag gaaggcgattctactgtggactttcttccaccccttatccaaacagcatccatttcaagc cctccacgacttacaagagtcctgtctcctcctactttgatgacatattcatccagcata gagtttaggcctacctatgaacaggagtctaaatacaatgagagaaagtcagcgcccaaa gaaaagacaggtatattggatgaagctatagaacgaagggcagcaaagaagtctatgttc acctttcgtgagaagcctaaggtgtctccaaacccagaacttctgtctctggttcagagc tctgatgaaaagaagaagcataaagagcaaagggaggcgacaggtgacgacgagcacctt gccctgggagccgaagcctcaaacttcttacacgagagcacgtcgaaacataggactccg ccctcagattcagataatgttccggagtggtcttcgtgtttgaagactccagaaagaaga gtcatgcttcagccgaaacccccccagaccctgacggaagtgaaagggaaaggggctgag ctgtttgctaaaaggcagtctcggatggaaaagtacgtggtggagtccccagcagttaca ggcgggccgttgaggccaccatcccccaccatgtccttgcctccatcttggaaatactca aataaccagacccgcttgagatgcatgccaagcccagcccatcccccctttacttcttct agaacattcaaagctcgtccttcgatgtacttgaataacggcaccagccccgtagaaaac ggaagctccaggaaggaatcagaaatcgcaaaacatcagccttatcagctcaattcttca ttatttatcctctccccatccaaggatccagtgcagtctttacccagagcagcaccacca cctaagcccagggtgtttgattctactccattcgcaaagcagaactcgtgcccatttaac cacccacctccatctccgctctttgactgcccgactccatttagggccagtagacagctg tccagtccgttgtcaccagcctccccaaacagcaccgggatgcaagacttcagaccaagc cctggggtgcccgtcgaagctcctcacagccctcaagttttgtcccctcccatattcaga gtctcttcgcctagaactaaaatggagttccaggctccgaggccctctttttcagccagg gatgcagggattgaagcccaggttagaagggaatctctccccatcaaccatacttggacg cccaactctgtaagacgtatgagcagcttggaggcgtgtcctgcatctacgagagcgcct gctctgagggaaggcagagtgagccctgccatgagcccatccccaacatctccagcttct ccaccctgggtacagaggtcccagtccccattagcaaagaaccccaacaacaagcgtatg gtgaccctcttggccaaaaatatcatcaatgctgctaaaaggaagagctctctatccacg tctcctggagccagttgccaaggttcacccgtatcacccccaagtaatgcatgtttgtcc agcgggtcacaacgtgtcagtgtctctcctttcaacagaatcataacaacccaatctccg acagtgctgagcccaccacacacaccactgcaaatgaccaggtctccagttaaactgtac tccaccagatccctgacggattccgacatctcaatcgattctgaggactcgggcaccaag tctccggggacgatcagctataatatctgtcccagaggatggactgggagcctgaggtcc aagagaggaagtgtcacatcagaagcttaa

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