Latimeria chalumnae (coelacanth): 102366509
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Entry
102366509 CDS
T02913
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102366509 (TRPA1)
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102366509 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102366509
NCBI-ProteinID:
XP_014342061
Ensembl:
ENSLACG00000013023
LinkDB
All DBs
Position
Un
AA seq
1130 aa
AA seq
DB search
MKEQDHCSGKMSKGCSLKELKPNQNSSESFYTSVSKEDETKENVGEDIFQLISDGNITAV
QNIIMKNSDCLSKLDKLNATPLHYAAGDGNLEIMQMIMDDAEYEVLNVMDCNGNTPLHWA
TEKNQIESVKMLLDRGANPNILNSAVESPLHLAIKLSHNEMVEVLLSYHNTDVNLGGELE
NTPLILACWIDNHGAVRILFDHGALLCKPNRFKIYAIHVAAFAGSKTSMELLLTKGEELG
YTREKQINFIDKSLNSPLHLAIHGGNIETIKCCIDNGANLELQENNKSMALHLACSQGAI
ETVKLILLSYSGKKDLVNIPDGIMQTPLHRAAVFDHYEVVDYLLSKGANIDSVDCELRSA
LLLATSCGAWKTVNLLVSKGVNTKLKDKSGCNFLHLVALQPRGLKNLNEEVLQVQHCSNC
IKELLNDVDNDGCTPLHYACKQGVSDSVNNMIGLKVCVLSKTKNKRSALHFAAAYGRFHT
CRNLLQNMSDTRLLNEGDEKGMTPLHMAAENGHAKVVQLLLKKGALTLCDFKEYTSLHYA
ALGGYTQTMQVLLDTHLKLMDETEEEGNTALHLAAREGHTSAVCLLLAKGAKITLNKSNA
SFLHEAVHHGRKDVTHAIIFSERWHEAIMSFDFTSDNGCSLLDMIAYLPEAYRWVLDRSM
NESSEDKRSPNFFIEYDFRYLQVPLYMKEMTKENKALHFEPLICMNNMVRFKRMELLTHP
VCREYLRMKWIAYGIKAHVINLAVYLLGLLPLTALIVYPREKNNSTETFSPKYAQRNGQV
PHFVTVCMFIVLFMSLFGVCKELVQLFQQRWKYLMDCSNLLDWSIIVFNILFVVPMLFGN
FNGCHWEFGSIAVFLSWVNLLLYFQRFEQCGIYVVMFWEILKTLFRIVLLFFFLILAFGL
TFYALMNSQVSYSSPVFSTIRVFTMMLGEINYQDSFLIPLMENKMAYPGLTFIMLIVFVL
LMPILLMNLLIGLAVGDIAEVQRNASLKRIAMQIQLHTSLENKLPLWFLKRVDQLTLKVY
PNRSRFCGLGVMYSFFFFLNVVQSTSLTSDVSVLELELKKQKYRLKDMSALLHKQHELIK
LIIQKMEIVSETEDQDDQDLSQYSKAKRHNFAQKTSKWDTVLKVIQTKGI
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacaagatcattgcagtggaaaaatgtcaaaaggatgctcattgaaggaactc
aagcccaatcagaacagtagtgaaagcttttatacaagtgtcagcaaggaagatgaaaca
aaagagaatgttggtgaagacattttccagttgatctctgatggaaacataactgctgtt
cagaacatcatcatgaaaaattctgattgtcttagcaagctagataaactcaatgcaaca
cctttgcattatgctgctggagacggtaaccttgaaatcatgcagatgattatggatgat
gctgaatatgaagtgttaaatgtgatggattgtaatggaaatacacctctacactgggca
acagagaaaaatcagatagaaagtgttaaaatgctacttgacagaggagctaacccaaac
atcttaaactcagctgtggagtctcctttacatttggctataaaactgagtcacaatgaa
atggttgaggtactactatcttatcacaacacagatgtaaatttgggaggagaacttgaa
aacacacctctcattttagcatgctggatagataatcatggagcagtaagaatcctgttt
gatcatggagccttgttatgtaagccaaataggttcaagatatatgctatccacgtagct
gcctttgcaggtagtaagacttcaatggaacttcttctaacaaaaggtgaagagctaggt
tacacacgtgaaaaacaaataaattttattgacaaaagcctaaatagcccacttcacttg
gcaatccatggtgggaacattgaaacaatcaaatgttgcattgataatggagcaaatcta
gaactgcaagagaataataaatctatggctcttcatcttgcatgttctcaaggggcaatt
gaaacagttaaactgatacttttatcttattctggcaaaaaagatttagtaaacattcca
gatggaattatgcagacaccactgcacagggctgcagtatttgatcactatgaagttgtg
gactatttactgtcaaagggagccaatattgatagtgttgactgtgaattacgttctgct
cttttgttagcgacatcttgtggagcatggaaaacagtgaatttactggtgtcaaaagga
gtaaatacaaaattaaaagacaagtcaggctgcaacttccttcacttagtagcattgcag
ccaagaggattgaagaatttgaatgaagaagttttgcaggtacagcattgtagcaactgt
atcaaagaattgctgaatgatgtggacaatgatggctgtacccctcttcattatgcgtgc
aagcaaggagtatctgattctgttaacaacatgattggcttgaaagtgtgtgtactttca
aagacaaaaaacaagagatctgctctacattttgctgctgcttatggacgtttccatact
tgccgcaatctccttcagaatatgagtgacacaagacttttaaatgaaggagatgagaaa
ggaatgactcctcttcatatggcagctgagaatggccatgcaaaagtagtccagcttctt
ctcaaaaagggggcacttactctttgtgatttcaaagaatatacaagcctgcattatgct
gccttgggtggatacactcaaacaatgcaggtacttttggacactcatctgaaactgatg
gatgagactgaggaagaggggaacacagctcttcatttagctgcaagagaaggacatacc
agtgctgtctgtctcctacttgctaagggagctaagataacgctcaataaaagtaacgct
tcttttctccatgaagctgtacatcatggaagaaaggatgtaacccatgctatcattttc
agcgaaaggtggcatgaagccataatgtcttttgatttcacatctgacaatggctgttcc
ctgcttgatatgatcgcttaccttccagaagcatacagatgggtattggacagaagtatg
aatgagtcgagtgaagacaaaagaagcccaaacttttttattgaatacgatttcaggtat
ctccaagtcccattatatatgaaagagatgacaaaagaaaacaaagcattacactttgaa
ccacttatttgcatgaataacatggtaaggtttaagcgtatggaacttctgactcatcct
gtgtgtagggaatatttacggatgaaatggattgcctatggaattaaggcacacgttatt
aacttagctgtctatttgcttggtctcctgcctctgactgctttgattgtgtatccaagg
gaaaaaaacaattcaacagagacattttctcctaaatatgcccagagaaatggtcaggta
ccacactttgttactgtttgtatgtttatagttcttttcatgagcttatttggagtttgt
aaagagttggtacaacttttccaacagcgatggaaatatttaatggactgttctaatcta
ctagactggtctataattgtgttcaatattctctttgtggtccctatgctttttggtaat
ttcaatggctgccattgggaatttggatctattgcagtgttcttatcatgggtcaacctc
ttgctctacttccaaagatttgaacaatgtggaatctatgtggtaatgttctgggaaatt
ctgaaaacactatttagaatcgtcctcctattcttctttctgattttggcttttggactg
actttttacgctctcatgaattcacaggtctcatatagcagtcccgtcttttctacaatc
agagtctttaccatgatgttaggagaaattaactaccaagacagttttcttattccactg
atggaaaacaagatggcttacccgggtttaactttcataatgctcattgtatttgtttta
ctgatgccaatacttctcatgaacctacttattggtttggcagttggagacatagcagaa
gtacaaaggaatgcctctttaaaaaggattgctatgcagattcaacttcatacgagcctg
gaaaataaactaccactttggttcctgaagcgggttgaccagcttactctgaaagtatat
cccaatagatcaaggttttgtggacttggggtaatgtactctttttttttttttttaaat
gttgtccaatcaacctctctcactagtgatgtatctgtactggaactggaacttaagaag
cagaaatatcgactcaaagacatgtcagcactcctacataaacagcatgagcttattaaa
ctcatcattcaaaaaatggagattgtgtcagagacagaagatcaagatgatcaggatctt
tctcagtacagcaaggcaaagaggcataattttgctcagaagactagcaagtgggatact
gttctgaaagtaatacagacgaagggcatctaa
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