Latimeria chalumnae (coelacanth): 106701763
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Entry
106701763 CDS
T02913
Symbol
RBM12
Name
(RefSeq) RNA binding motif protein 12
KO
K24526
RNA-binding protein 12
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
106701763 (RBM12)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106701763 (RBM12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_8
Motif
Other DBs
NCBI-GeneID:
106701763
NCBI-ProteinID:
XP_005986783
LinkDB
All DBs
Position
Un
AA seq
1049 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVSLLLSSKTEMQNMIELSRRRFETANLDMSPANSNRPGPTSSSSAVSGRGNM
PTTAPSFSSPTPSVVSTASSVHDSNKTMPTFSTASVGNAPPNLGPSFGSPSFSSTLPTTI
SPMNSVPPPPIPPMPTMPALPPMPSIPPMPVPPPVSTLPPVPPVPPILPVPSVPPMTNIP
PVSGIPPISAPPLGPMPGGLNGSGSIMSMTSNLTHMFMSPMNPVNPVASISSQSCIKPPL
VNSDDLYVRLHGMPFSSTETDVREFFYGLQVEAVQMMSDHLGRSNGNAFVKFFTPQDTYE
ALKRHRMMMGQRYIEVSSATERQWMSPGASIGTKPSMAASIQSQVQFRSRSKSPSEKSRS
RSRSPLKVDFCVYLKGLPYEAENKHVIEFFKKLDIVEDSIYIAYGPNGRATGEGFVEFKT
EIDYKAALCRHKHYLGNRFIQVHPISKNGMLEKIDLIRKRLQNSALSDHKSSSANTDGEK
SAARVCAHIWNIPYNVTKNAVLQFFEGINLEEDSVKVLVDSNGQGLGQAVVKFKSEADAV
KAERLHRKKLNGRDAFLHLVTVDEMKEMEKNPPSQGRRGLKTQFQSHTLPPIVPTGSGEE
NSFISGGSGDVNNGPPFNPTSNFSVPGNSFGVSVPPPGVGGGFGDGRPGRPPAGGVSLSG
QGVEPPGFGSSNSSLSRPPTFGGASGNLSGPLSFANGPASLSTPPGFASGPPGFGSGHGH
ASGPLGFGSGPGQGSGPPGYESGPPGFGSGPGHESGPPGFGSGPRHESGPPGFGSGPRHE
SGPPGFGSGPRHESGPPGFGSGPRQEGGPPSFGSGPGHAGGQAGLGSGPGHVGGPLGLGS
GPSSLGSGPPSLGSSSGHTSGPLGLGTGPGQSGPPGPGSGPGHRSGPPGFGPGPGNLSGP
PGFGTGPGKPGPTVIKVQNMPFAVSVDEVVDFFYGYKVIPGSVCLKYNEIGMPTGEAMVA
FESRDEAMAAVVDLNDRPIGSRKVKLVLG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcttgcagggcctcccgattgtggcggggaccatggacatccgg
cacttcttctctggattgacaattcctgatgggggcgtgcatattgtagggggtgaactt
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgtaca
gggggtaccattaaagggtccaaagtgtcgcttttgctgagtagcaagactgaaatgcag
aatatgatagaacttagccgtagacgctttgaaactgcaaatttagatatgtcaccagct
aactcgaacagaccagggccaacatcctcaagttctgcagtgagtgggagaggtaatatg
cccactacagcgcccagttttagcagccccacacctagtgtagtgtctacagcttcctca
gtacatgacagtaacaaaacaatgcctacattttctactgccagtgtggggaatgctccg
ccaaacttagggccgagctttggaagccctagctttagctcaactttacctaccacaatt
tccccaatgaattctgtaccacctccaccaattcctcctatgcccacaatgccagcactg
ccacccatgccttcaattccaccaatgccagttccacctcccgtttctaccttaccccct
gttcctccagttccaccaatcctgcctgtcccttctgtgccaccaatgacaaacatccca
ccagtttcaggaatacctcctatcagtgcaccacctttaggccccatgcctggaggattg
aatggctctggatctataatgagcatgaccagtaatctgacgcacatgtttatgagccca
atgaatcctgtaaacccagtagcttcaataagttctcaaagctgtataaaacctccactt
gtcaactccgatgatttgtatgtccgtcttcatggaatgcctttttcttcaacagagaca
gatgtaagggagtttttctatgggcttcaagtagaagctgtccagatgatgagtgatcat
ttagggcgcagtaatggaaatgcatttgtcaaattttttacccctcaagatacatatgaa
gctttaaaacgtcaccgcatgatgatgggccagcgttacattgaggtgagttctgcaaca
gagaggcagtggatgtctcccggagctagtattggtacaaaaccaagcatggctgcctct
atacaaagtcaagtacagtttcgttcaagatcaaaatctccaagtgaaaagagcaggtca
agatcacgatctcctcttaaagtagacttttgtgtttacttgaaagggctcccatatgaa
gctgaaaataaacatgttatagaattctttaaaaagttggacattgtagaagatagcatc
tatatagcatatggaccaaatggaagagcaactggagaaggatttgtagagtttaagact
gaaattgactataaggcagctctttgtcgtcacaagcattacctaggcaatcgcttcatt
caagttcacccaatcagtaaaaatggtatgttagaaaagatagacttgattcgcaagcga
ctgcaaaactctgcattaagtgaccataaatcgagttctgcaaacactgatggggaaaaa
agcgcagcacgagtgtgtgcacatatatggaatatcccttataatgtcacaaaaaatgca
gttcttcaattttttgaaggaattaacttggaagaagatagtgttaaagttttggttgac
agtaatggccaaggtctggggcaagctgtagtaaagttcaagtctgaagcagatgcagtt
aaagcagagcggcttcaccgtaaaaagctaaatggaagagatgcattcttgcatcttgtc
actgtagatgaaatgaaggaaatggagaaaaatcccccatcccaaggaagaagaggtctt
aaaactcaattccagagccatacgttaccacccatagttccaacaggtagtggggaagaa
aactcattcataagtggtggttcaggagatgtaaataatggtcctccatttaaccctacc
agtaattttagtgtaccaggtaactcctttggggtctcagtaccaccaccaggagtggga
ggtggctttggagatggccgacccgggaggcctcctgctggaggtgtcagcttgtctggt
caaggagtagaacccccaggttttggaagtagcaacagtagtttaagcaggcctcctact
tttggaggtgcttcaggaaacttatcaggtcccttgagttttgcaaatggtcctgcatct
ttgagtacacccccaggctttgcaagtggcccaccaggctttggtagtggccatggacat
gcaagtggtcccctaggttttggtagtggccctggacagggaagtggccctccaggctat
gaaagtggccctccaggttttggcagtggccccggacatgaaagtggccctccaggtttt
ggcagtggccccagacatgaaagtggccctccaggttttggcagtggccccagacatgaa
agtggccctccaggttttggcagtggccccagacatgaaagtggccctccaggttttggc
agtggccccagacaagaaggtggtcccccaagctttggaagtggccctggacatgcaggt
ggccaagcgggtctgggaagcggtccaggacatgtaggtggccctctgggtctgggaagt
ggtccttcaagtttgggaagtggcccccccagtttgggaagcagctctggacatacaagc
ggccccctaggtctgggaactggccctggacagagtggtcccccaggtccaggaagtggc
cctggacataggagtggccccccaggatttggccctggaccgggtaacttaagtgggcct
ccaggttttggaactggtcctggaaaaccagggccaactgtaattaaggtacagaatatg
ccttttgcagtgtctgttgatgaagttgtagattttttttatggttataaagtgatccca
ggttcagtctgtttgaagtataatgaaataggcatgcccactggtgaagcaatggttgct
tttgagtctcgagacgaagccatggcagctgttgtggatctgaatgacagacctataggc
tcaagaaaagtgaaacttgtactaggatag
DBGET
integrated database retrieval system