Larimichthys crocea (large yellow croaker): 104919599
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Entry
104919599 CDS
T04659
Symbol
trps1
Name
(RefSeq) zinc finger transcription factor Trps1
KO
K22040
atypical GATA-binding protein TRPS1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104919599 (trps1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
104919599 (trps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
104919599
NCBI-ProteinID:
XP_019110358
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All DBs
Position
XIII:895155..1011903
Genome browser
AA seq
1563 aa
AA seq
DB search
MNSREMVRKKNPPIRSVGGEEEEEEEGRRPAGEEEEEGEEEGRVGAEAERINRPSEPESS
DRIRGDEEQEEEEGESECVSSSVSPSSVGDRYSNEERGGRRGGGGGGGGGGRAKRGGAAL
TDRPESQSEAEDGEKGLEEGERSERDRAEADHLTAPLISAPHHLLPRQEGGEESTTDTPP
LSSSPSPKLQDFKCNVCGYGYYGNDPADLVKHFRKYHLGLHNRTRQDAALDTHILALHNM
APQHTPLDIQTGQGQRNQAKELGKTRPEVHNQQHRTVMMNGTYDVQVTLGGTLIGIGRKT
SDCQGNTKYFRCKFCNFTYMGSNSLELEQHFLSLHPNKVKTPPSTPLLANNNLSTHDNQT
KERSQILDRVERVAVRAEDDSLVGYSIPVRACSDTSSWTGEPGRDAMQAYYWCKFCSWSC
EWSGGSAKLLEHYEQRHRMSTGGTMSPNNSNPGGMDRERERGGRREGGDHMASKSRKDPS
SNPSSTSQGDPNSSDSEAVVTSYNCQLCDFRYSMAHSADVIVVAPLLLHYQHNHSIHRCC
IQHCMYCPQGLCQPHKHLGEVSHPFACRKPTCPKCCTKFPQSTKQQDAVTSKPATATSPS
VTPPNSRGDPAVTCHPSNPAHPVVTQGVTHLCDQCAFATTDIDVLLQHYESCHTLINLKG
ASPHVKAEDEVGGDKGGGGAGGGGGGGGEREYSCTKCHFITEVEEEIFRHYRRVHACCRC
RRCDFTAPDSSALLDHFNSAHCHESSPSLNSLTTTSLPTSLTPSLTLSANGCSAPSTLAI
KEESKGDLRLLYSLAPPEGRLAEGGREEAGGVVKSEGGEEKEREREKGWVLGETRGLGER
GSEQAHGLLWVPKERMGPERGVERGTGVGSPSLFSSPLSLSFVSANHEASQQKRGVASPS
MVYLGDTKSFLGDNKSFLGDAKLYGGGRPGGATGGGGEKQIQMPPQQYTGGGGGGGGGGG
GGSGGGGGGGQETKGAAKEESQSLLRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACG
LYQKLHSTPRPLNIIKQNNGEQIIRRRTRKRLNPDSLSSETPAPKQQRITSEERMNGEES
DRSSIKNQQPSPRSRSPRSTQAFLANQTLEIHRRMPPLLLPSHPPSSMVAEGNGGIVEGG
IISKVEGGKGGGGSERGSPIEKYMRPSKPSSYSPPGSPIEKYQYPLFSLPLPLTLSPDLT
PESDWLRFWTKYKMAAASGVPGSISNLSSPGSLGNNAHYLGAMVTPVQHHQQSYTVPYCS
SPYSPLPPPPAPPHYPPPPLHSQTSSSSSLENDAPLDLAIRQRDTSAANAHMSTNGAERR
RQESPLAERLRENWKGEKEEEERIDGGNQREEIGKEEKDHLIKGRSSVPTNRTMVEVATQ
DDLTNRCVHCGIYFLDEVMYALHMSCHGDQGPYQCSFCLHVCVDRYDFTTHIQRGLHRYT
DKTSQNRSHAQDGIIQNAAAMLERECHNVTPEGKDEGDHSEVTDESSDVIGDSLDNQAKE
IAGNDANDNETEVEKEVGGESHDATIQELGDEMVSDSGDDITKNAEVTTVAESKNLDENT
ESN
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagagagatggtgaggaagaagaatccccctatcaggagtgtgggaggtgag
gaggaggaggaagaagaggggaggaggccagcaggagaagaggaagaggagggagaggag
gaggggagagtaggagcagaggccgaacgaataaatcgaccctctgaaccagaatcctcc
gaccggatcagaggagatgaggagcaggaagaggaggagggagaaagcgagtgtgtatct
tcatccgtctccccttcgtccgttggtgaccgctacagcaacgaggagagaggggggaga
agaggaggaggaggaggaggaggaggaggagggagggccaaacgaggaggagcggcgttg
actgacagaccggagagccagtcggaggctgaggatggggagaaggggctagaggaagga
gagaggagtgaaagagacagagcggaggcagatcatctcactgctcctctcatctccgct
ccccaccacctcctccccagacaggaagggggggaggagtcgacaactgacacccctccg
ctgtcctccagtccgtctcctaaactgcaggacttcaagtgcaacgtgtgcggttatggt
tactacggcaacgacccggctgacctggtgaagcactttaggaagtatcacctgggcctg
cacaaccgtacacggcaggatgctgccctcgacacacacatcctggccctccacaacatg
gctccccaacacacacctctagacatacaaacaggacaggggcagaggaaccaagccaaa
gagttgggaaagacaagaccagaagtacacaatcagcagcacaggacagttatgatgaac
ggcacatatgacgtacaggtgacgctgggtggcacgctaattgggattggccgcaagacc
tccgattgccaggggaatactaagtactttcgctgcaaattctgcaacttcacatacatg
ggcagtaattcattagaacttgaacagcacttcctgtccttgcatccaaataaagtcaaa
actccaccaagcacgcccctgctggccaacaataacctgtcaacacacgacaaccagacg
aaggaaaggagtcagatcttagacagggtggagcgggtcgcagtgagagcggaagatgat
tccctggtgggctactccatcccagtcagggcatgttcagatacgtcgagctggacaggg
gagccgggtcgagatgccatgcaggcgtattattggtgtaaattctgtagctggagctgt
gagtggtcagggggctcagcgaagcttttagagcactatgaacaaagacaccgaatgagc
acgggaggtactatgagccccaacaactctaaccctggagggatggacagagagagggag
agaggaggtagaagagaaggaggagaccacatggcatccaaaagccgcaaagatccatca
tccaacccgtccagcaccagccaaggagacccaaacagcagtgattcagaagcggtcgtg
accagttataactgtcagttgtgtgatttccggtactcgatggcccacagtgcagacgtg
atcgtggtagcgcctttactgctgcactaccagcacaaccactccatccaccggtgctgc
attcagcactgcatgtactgtccgcaggggctctgtcagccgcataaacacctgggggag
gtgtctcaccctttcgcttgtcggaagcccacctgccctaaatgctgtaccaagtttcct
cagtccaccaaacagcaggacgccgtcacttcaaagcctgccaccgccacctcacccagt
gtgacccctccgaattctagaggtgaccccgctgtgacatgtcacccctctaaccccgcc
catcctgttgtcacacaaggcgtcacccacttgtgtgaccagtgtgcgttcgccaccacc
gacatcgatgtgttgctccaacactacgaaagctgccacaccctgatcaaccttaagggg
gcatcaccacatgtcaaggcagaggatgaggttgggggagacaagggcggaggaggagca
ggaggaggaggaggaggaggaggagaaagggagtactcttgtacgaagtgtcacttcatc
acggaagtggaagaagagatttttagacactacaggcgtgtccacgcgtgttgccgttgt
cgacgctgcgacttcacggctcccgattcgtcagccctcctcgaccattttaactcggcc
cactgtcatgaatcctctccctcattaaactcattgacaacgacctccttacccacctca
ctgacgccttcgttaacactctcagccaatggctgctcagctccttctaccttagccatt
aaagaagaaagcaaaggggatcttcgcctcctctactcccttgcaccgcctgagggacgg
ttggcagagggaggcagagaagaggccggaggggtggtaaaaagcgaaggaggtgaggag
aaagaaagagagcgggagaaaggctgggttcttggggagacaagaggactaggggaaaga
ggaagtgagcaggcccacggtttactctgggtgcccaaggagcgaatgggacccgaaaga
ggggtagaaagagggacaggagttgggagcccatctcttttctcctcccctctctctttg
tcatttgtttcagccaatcatgaggcctcgcagcagaaaagaggcgtggcctcacctagc
atggtttacctgggagacaccaagtcctttttgggagataacaagtcgtttttgggagat
gccaagctgtacggaggagggaggccgggaggagccactggaggtggaggagagaaacag
atccagatgccccctcagcagtacacaggaggaggtggaggaggaggaggaggaggagga
ggaggaagtggaggtggaggaggaggaggacaggagacgaaaggagcagctaaagaggag
tcccagtctctgctacggcggcgcagaggcagcggggttttctgtgcaaattgtctgacc
accaagacgtcgctgtggaggaagaacgctaacggaggctacgtctgcaacgcatgtggt
ttataccaaaaactacattcgacgcccagacctctaaacatcataaagcagaacaacgga
gaacaaatcatccgacgacgaacccgaaaacgcctcaacccagattcgctgtcatctgag
actccagcccccaagcaacaacgcatcaccagcgaggagcgtatgaacggagaggagtcc
gacagaagctccatcaaaaaccagcagccttcccctcgctcccgctcgccccgatccact
caagccttcctagccaatcaaacattggagatccaccgacgcatgcctcctctgctcctc
ccttcgcatcccccctcctcaatggtagccgagggcaacgggggcatcgttgagggaggg
ataatatcaaaagtagagggaggtaaaggaggggggggatctgaaagaggtagtccgatt
gaaaagtatatgcgtccatcaaagccgtctagttattcgcctcctggttcacccattgaa
aagtatcagtatccccttttctccttacccctaccattaaccctctcacccgatttgacc
cctgagtcggattggctcagattctggaccaagtataagatggcagcagcctctggggtt
cctggtagcatcagtaatctaagcagccctggtagcctcggaaacaacgcccattatctt
ggtgcaatggtgactccagtacagcatcatcagcaaagctacacggtgccttactgctcc
tctccctactctcctcttccgcctcctccagcacctcctcactatcctcctcctcctctt
cattcccagacctcctcgtcgtcatcattagaaaacgatgctcctttggatcttgcaata
agacagagagatacgagtgctgcaaatgcgcacatgtcgacaaatggtgcagagaggaga
agacaagagtcgccgctggctgagaggttgagggagaactggaaaggagaaaaggaggag
gaggagaggatagatggggggaaccagagggaggagataggaaaggaagaaaaggatcat
ttgataaaaggtcggtcaagtgtcccaacaaaccgcaccatggtggaagtggccacgcag
gatgacctgaccaaccgctgcgtccactgtgggatctacttcctcgacgaggtcatgtat
gccctgcatatgagttgccacggcgaccagggaccataccaatgcagtttttgcctccac
gtgtgtgtggatcgctacgatttcaccacgcacatacagaggggcttacacaggtacaca
gacaaaacgtcgcaaaacaggagtcacgcgcaagacggcataattcagaacgctgcagcg
atgttggagcgcgagtgtcacaatgtgacgccagagggaaaagatgagggtgatcacagt
gaggtcacagatgaaagcagtgatgtcataggagatagtcttgacaaccaagcaaaagaa
attgcaggcaatgatgccaatgacaatgaaacagaagtcgaaaaggaggtaggaggagag
agtcatgacgcaacaatccaggaattgggagacgagatggtgtcagatagcggtgatgac
atcacaaaaaacgcagaggtcacaactgttgctgaatctaaaaacttagacgagaacaca
gagagtaattaa
DBGET
integrated database retrieval system
