Larimichthys crocea (large yellow croaker): 104920976
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Entry
104920976 CDS
T04659
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03010
Ribosome
lco04120
Ubiquitin mediated proteolysis
lco04137
Mitophagy - animal
lco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
104920976
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104920976
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104920976
04137 Mitophagy - animal
104920976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lco03011
]
104920976
04121 Ubiquitin system [BR:
lco04121
]
104920976
Ribosome [BR:
lco03011
]
Ribosomal proteins
Eukaryotes
Large subunit
104920976
Archaea
104920976
Ubiquitin system [BR:
lco04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
104920976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Dsc3_N
GntR
Motif
Other DBs
NCBI-GeneID:
104920976
NCBI-ProteinID:
XP_010731693
LinkDB
All DBs
Position
XII:17134145..17138086
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQRYNCDKMVCRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgtgaaaacgctgacgggtaaaaccatcaccctcgaggtggagcccagt
gacactatagacaatgtcaaagccaaaatccaagacaaagaaggtatcccccctgatcag
cagcgtctcatctttgctggaaaacagctcgaggatggccgcaccttgtcagactataac
atccagaaggagtccactctccacctcgtcctgcgtctgagaggtggcatcattgaaccc
tccctgagacagctggctcagaggtacaactgtgacaagatggtctgtcgcaagtgctac
gctcgtttacatccacgtgccgtcaactgccgcaagaagaagtgtggacacaccagtaac
ctcaggcccaagaagaagctgaagtag
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