Larimichthys crocea (large yellow croaker): 104921050
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Entry
104921050 CDS
T04659
Symbol
rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104921050 (rapgef6)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104921050
NCBI-ProteinID:
XP_019128090
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All DBs
Position
XXII:4597861..4736340
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AA seq
1726 aa
AA seq
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MSVLRWHRLSALWKNWMFNQEPAEEQDQISEAPGHEAEPRKKEGNALKDHNSDFQNLTEK
LDHTTEKSKFENQNLEFTNLNSVPKTQKSELFKRSSSELCSQVSNSEDQSSSCDTTPEGC
GRKSRRSCYSEEGIDCVLQVDNGSEGDDSFLQREGSQRRSRRRFRRVNPRGERELITDGQ
EPTGHNTDYVNNQLPADLNKMHLTDHAHQQVMHMAPSQSGCSIASDSGSSSLSDIYQATE
SELGDVDLSGLPEAAVDSEEEEEEDEDLERASDTLLGRDLVRECLEKDPADRNDDDIEQL
LEFMHQLPAFANMTMSVRRDLCSVMVFEVVEQAGTVILHNKQELDLWYVILNGAVEISHP
EGRVETLCMGNSFGISPSLDKQYMNGEVRTKGDDCQFVCIAQEDYWRILNHVEKNTHKVE
EEGEIVMVKEHRELDRSGTRKGHIVIKGTPERLIMHLVEEPSVVDPTYIEDFLLTYRTFL
SNPMEVGKKLLEWFQVDSLRDTVTRIVLLWVNNHFNDFEGDPAMTHFLEDFEKHLEVTKM
KGHLRLLNIACAAKAKWRQITLQKASRESPLYFSVQGGSERGFGIFVESVEVGSKAAEAG
LKRGDQIMEINGQNFENISVTKAVDILRNNTHLSLTVKTNIFVFKELLSRIVHEKKNGGP
HIPKIQEKKGNRFSIPDLPGDMEFPTDHKSTRKMKANTVSGGRNKIRKMLEKTRFSILPP
KPFSDGGMGQSQDDSIVGTKQCRHSVAIMPIPGNLSSSSPDLLQPATSVLDFSNPAALGL
YYIPDQVIRVFKADQQSCYIIISKDTTAKDVVAHTVNEFGLIAAPETYSLCEVSVSPEGV
IKQRRLPDQLSKLADRIQLNGRYYLKNNMETETLCSDEDAQDLLRESQISLLQLSTMEVA
AQLSMRDFELFRNIESTEYVDDLFKLESSRGSGNLKQFEEVINQETFWVATEILKEPNAL
KRMKTIKHFIKIALHCRECKNFNSMFAIISGLNLAPVARLRSSWEKLPSKYEKLFGDLQD
VFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDLTFLHEGNDSSVDGLVNFEKLRMIAK
EIRHVVRLTSANMDPALMFRQRKKRWKSLGSLSQGSTNSNMLDVQGGAHKKRVRRSSLLN
AKKLYEDAQMARKVKQYLSNLTVETDEEKHQIMSLQCEPSYSTLSKNLSERRSTKSDMSP
VSLRSALPSGKPQNRVSQVLQVQVPLNPLRKKSTAKDIGTPNANSPQVVKKPPVNSSEEW
STKRPSDDTVSTISSLHSSPTVSPQGSPRKVGGVAKSQNSSQMNLSGSSSSLTSDASTKA
GPRSYGIGYTLLPAGKADNLSDSSHSEISSRSSICSVDSVPAPGPDDRCNSSNRTCTTTT
TAASATTTTTTTPIAVAESTPAMHAHLNADYSQPSTSSSLSLARGYVARASTFTSSTSTE
ELTPDHTSVDSVADSGRGSWTSCSSNSHDSFQSLPTSSCRPWDHGIHGHPLSLPHTHLGA
FKHTQLTGPIAEVEAAAHTWANEDAAKHHSRNSSSDLSNQSRQSWASSSSLSDTYEGNYG
TIKRRNTSEHPSSPTNEEGGQSTDPVYKTVTSSTEKGLIVYCVTSPAKDERYRAPPPTPP
GYQGLALGDLVLTDGVVGVPGGLLPRPPHLKPPDYSVALQRSKLLQSPGAASNLAEARRL
AANHHLHHPEARTAGSTQGHSRPPSICLPPQELADSEDGTSPRMVK
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgctccgctggcaccggctctctgcgctctggaagaactggatgttcaaccag
gagccagcagaagagcaggaccagatctcagaagctccagggcatgaagcagagccacgg
aaaaaggaagggaacgcattaaaggatcacaactcagactttcagaacttgacagaaaag
ttggatcatacaacagagaaatcgaaatttgagaaccagaacttggaatttacaaatctg
aactctgttcctaagacccaaaagtctgaactatttaaacgcagcagctctgagctgtgc
tcacaggtctcaaacagtgaggatcagtcttccagctgtgacaccacacctgaaggttgt
gggcgcaaatcccgtagaagctgttattctgaggagggtattgactgtgtattgcaggtg
gataacggcagcgagggggacgacagttttctgcagagagagggatcacagcggaggtcc
agacgacgcttcaggagggtcaaccccagaggagagcgggaactgatcacagacggccaa
gaacccaccggccacaacacggattatgtcaacaaccagcttcctgctgacctcaataag
atgcacctaacagaccacgcccaccagcaggtgatgcacatggctcccagccaatcagga
tgcagcatcgccagcgactctggaagtagcagcttatcagatatttaccaggccacagag
agtgagctgggagatgtggacctgtctggacttccagaggctgcagtggacagcgaggaa
gaggaggaggaagatgaggacctggagagagcttcagacactcttctgggtcgggactta
gtcagggagtgtctggaaaaagacccagccgatcgcaatgatgacgacattgagcaacta
ctggagttcatgcaccagttgcctgcctttgccaacatgaccatgtccgtgcgcagagac
ttgtgcagcgtcatggtgtttgaggtggtggagcaggccggcacagtcatactgcacaac
aaacaggagctggacctctggtatgttatcctcaacggagccgtggagatcagccatccg
gagggaagagtggagactctttgcatgggcaacagttttggcatctcaccctcattggac
aaacagtatatgaacggagaagtccgcaccaagggcgacgactgccagttcgtctgcatt
gcccaggaggactactggcgcatcctcaaccatgtggagaagaacacgcacaaggtggag
gaggagggggagattgttatggtgaaggagcaccgtgaacttgaccgcagtggcaccagg
aagggacacatcgtgatcaagggaaccccggagcgtctgatcatgcacctggtggaagaa
ccatcggtggtggaccccacatacatcgaagacttcctgctgacctacaggaccttcctg
tcaaatcctatggaggtcggcaagaagctgctggagtggttccaggtggacagcctccgg
gacactgtaaccagaattgtgctgctgtgggtcaacaaccactttaatgattttgaaggc
gatccagccatgacacacttcctggaggactttgagaaacatctagaagtgacaaaaatg
aagggccatttgcggctgctgaatatagcatgtgcagccaaggctaagtggagacagatc
actctgcagaaggcatccagggagtcgcctctctacttcagcgtgcagggaggcagcgag
agaggattcggcatctttgtcgagtcggtggaagtagggagcaaagctgcagaggccggg
ctcaaacggggagatcagatcatggagatcaatggtcagaactttgagaacatctccgtc
accaaagctgttgacatccttagaaataacacacacctctctctcaccgtcaaaaccaac
atatttgtcttcaaagagctcctcagcaggattgtgcacgagaagaagaacggcggccct
cacattcccaagattcaggagaaaaaaggcaatcgcttctctatccctgaccttcctgga
gatatggagttccccacagaccacaagagcaccaggaaaatgaaggccaacactgtttca
ggaggacgaaacaagattaggaagatgctggagaagacgcgcttcagtatactaccgccc
aaaccattcagtgatggtggcatgggtcagtctcaggatgacagcattgtgggtaccaag
cagtgtcgccacagtgtagccatcatgcccatccccggcaacctgtcatccagcagcccc
gacctgctgcagccagccaccagtgtccttgacttctcaaaccctgcagccctgggacta
tactacatcccagaccaggtgatccgggtgttcaaagccgaccagcagagctgctacatc
atcatcagtaaggacactactgccaaggatgtggtcgcccacaccgtcaatgagtttggc
ctcattgcagcacctgagacctactccctgtgtgaggtatcggttagcccggagggagtc
ataaaacagcgccgccttcccgaccagctttccaaactggctgatcggattcagcttaac
ggcaggtactacctgaagaacaatatggagactgagacgttgtgttcagacgaggatgcc
caggatctcctcagagagagtcagatctctctgctgcagctcagcaccatggaagtcgct
gcccagctctccatgagggactttgagctcttcaggaacattgagtccacagagtatgtg
gatgacttgtttaaactagagtcctcgaggggaagtggtaatctgaaacaatttgaggag
gtgataaaccaagagaccttttgggtagccacagagatcctgaaggaacccaatgctctg
aagaggatgaagaccatcaaacacttcatcaagatcgccctgcactgcagagagtgcaag
aactttaactccatgtttgctattatcagcggcctgaacttggcaccggtggctcggctg
cggagctcgtgggagaaattgcccagtaagtacgagaagctgtttggagacctgcaggac
gtcttcgacccctccaggaatatggccaagtaccgcaacatcctgagcagccagagcatg
caaccacccatcatcccactgttcccagtggtcaagaaggatctcaccttcttacatgaa
ggcaatgactccagtgtagacggtcttgtgaactttgagaagctgaggatgatcgccaag
gagatccgacacgtggtgcgattgacttcagctaacatggaccctgccctcatgttcaga
cagaggaagaagaggtggaagagtttagggtctttgagtcagggtagcaccaactccaac
atgctggatgtgcagggcggcgcccataagaagcgagtacgtcgcagctcgcttctcaac
gccaagaagctgtatgaagacgctcagatggccagaaaggtgaagcagtacctgtccaac
ctgactgtggagacggacgaggagaaacaccaaattatgtccctgcagtgtgagccgtcc
tacagcaccttgtcgaagaacttgagtgagagacgatccaccaagtcggacatgtctcca
gtgtctctgcggtcggctctgccctcggggaaaccacaaaacagagtgtcacaagtcctt
caggtccaggtcccactgaaccctctacgaaagaagagcactgccaaggacataggcaca
cctaacgccaactctccccaggtggtgaaaaaacctccagtgaactcctcagaagagtgg
agcaccaagagaccatctgatgacaccgtctccaccatctcctcactgcactccagcccc
acagtgtcgccacagggctccccgcgtaaagttggaggtgtggccaagtcccagaactcc
agccagatgaacttgtcgggatcttcgtcgtcactgacaagcgacgccagcacaaaggcc
ggcccccgcagctacggcataggttacaccctccttccagctggtaaagcagacaacctg
tcggactcgagtcacagcgagatctcctcccgctccagtatctgttcagttgactccgtg
ccggctcccgggcctgacgacaggtgtaatagcagcaacaggacctgtactactactact
actgctgctagtgctactacaactactaccacaacacccattgcggttgctgagagcaca
ccagcaatgcatgcacacctaaatgctgattacagccagccgagcacaagtagttccttg
tcattggctcgaggatacgtagcacgagcctctaccttcacctcctccacctccacagag
gagctgaccccagatcacacctctgtggactctgtggccgacagcggccgcggcagctgg
acgtcctgctcctccaactcccacgactccttccagagcctgcccacctcctcctgccgg
ccctgggaccacggcatccacgggcatccactgtccctcccacacacacacctgggcgcc
ttcaagcacacacagctaaccgggccgatagcagaggtcgaggctgccgctcacacgtgg
gcgaatgaggatgccgccaagcaccactccagaaactccagctcagatctgtccaatcag
tcgcggcagagctgggcgtcttccagctcgctgtcggacacctacgaggggaattatggg
acgataaagaggcgaaacacctcggagcacccctcctcgccaaccaacgaggaaggaggg
caaagcacagaccctgtctacaaaacggtgacgtcaagcacagagaagggcctgatagtg
tactgtgtcacctcccccgccaaggatgagcgttaccgagctccccctcccacccctcca
ggctaccagggtctggctctgggggatctcgtcctcacagacggagtagtaggtgtgcca
ggaggtctccttcccaggcctcctcacctcaaacctccagactacagcgtggccctgcag
aggagcaaactcctgcagagccctggagccgctagcaatctggctgaggcacggaggctg
gctgctaaccatcacctccaccacccagaggcccggacggctggctccacgcagggccac
tccagaccgcccagcatctgcctcccaccacaagagctcgctgacagtgaggatggtacg
tcccccaggatggtgaaatga
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integrated database retrieval system
