Larimichthys crocea (large yellow croaker): 104924082
Help
Entry
104924082 CDS
T04659
Symbol
casp8ap2
Name
(RefSeq) CASP8-associated protein 2 isoform X1
KO
K25593
CASP8-associated protein 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104924082 (casp8ap2)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
104924082 (casp8ap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
YabA
Motif
Other DBs
NCBI-GeneID:
104924082
NCBI-ProteinID:
XP_027140044
LinkDB
All DBs
Position
XI:complement(3074470..3087985)
Genome browser
AA seq
1956 aa
AA seq
DB search
MDNVDMNDASGLLVHDANEDSLDIYDGLDVCSSSTAEKSPPNASQLKESMDLYEEIVTEE
QQSRESTYLELESRFQAAQNQIKELRRRLEQMEMQNTGLNTENHRLKKNISALLRTARQE
VTRKDAEIQRLNQWSQKGHHHQSYNNNRWDHNSSSRTSMGSSKSRPPPPPPSSARPPPPP
PSSARPPPPPPSSALPPPPPSSALPPLPPPPPFGLPPPLPPLLASPPRGDHPPREPPQPS
RKESNSSSCQVSGSSVETRASKVSSHSNLKSSSRGDCDVPDKQAEHSVSKSSSCSSTRHS
ESDKHKSKHREEKCQKVSESTDRRHRTGSDPEKSRLHKADRDMGRRHDSKSCKSRSYLNA
EHHRSERTKSPPPEILYSSASSDDKKGRNREQRQDKGKTSTPDSEHSAAHSSKDGYSRDH
RRNKTSDGHIRRSDSKDRKKSSSNKHAEGYRDSSKEREGDRLSKDYQRKEDRQREDENNR
KHKWSSLSETSREREKQRLKESDQPKVDVCSKERKEKTQEALKKSSEEPNVTEKSSVEEN
SPNRKLCFMETLNLTLSPIKKPALPMDASQDDLKLADKRVESSPDNESSQPNVEDMCVID
EVNSSEQEAGLEDVAEQSPDTSKTPQSEKTQVRCEDVKDVQEDKNEVKSEAPAADEQLED
HSVQTTSAHSRPLDTAENQPTVQITQGSPERSSLKATDADKTKLVSDSQEDECGPLQATD
VASDTPESKSGQHTGNTLQKVNPGNDTDLSAAVTKPVVLDSSIELKCAVLKTAEQKSPDS
VKEVTAASPPRAGDVSDKTRPQNKQTSPTILPQDCQQGSCPPASSSIHEKDARPLEDGPK
DADTVSSTISLESLPQEGLSLSEAIYVLTQTSEDADDSSSITAEPSSSTGCIAVSKVSST
TEESMLPEKYSDLTVTPKKNVFPGKSHENNFEPSSSVPLLYDEDSMMRTLSNLKRIPDAI
SPLRSPIRITKRSHLHVHGKPGHVKSLQKEFTSPVDANSKKLDVNKENKYPGSPANNDSQ
NLVDKVSDLPSSLSDTELEEGEILSESDETAADSPVPATKRAKLARPVRNKPSSKTLLNK
TSKEKPVETTGVSTRSPKSRFKTVCPAATKASFSTIDEVMETFKLVRTEIRKKYMKLHKT
FPKKSFYGVMDNFQESFLEFVDGAHFGQICSQEVELKSKLKKLIVSVFSKVLNNGIVKRI
FEQQAVDLKQKLWDFVDVQVDYLLKDVCTVLKSLCKPTKAPAEDSKPSGNETISRKPSAK
KPQCQQKTAQSAPTNLIRLKPRAVAPYKTGLGSRGKDIRITHTDKDRNVDPHPTNVPNPQ
TVDDFLPPKTVNSTPEKTSVSSLVVSQNGSLLDRTDFELLTEQQASSLTFNLVRDTQMGE
IFKCLLQGSDLLESSGITGDNTTWSLGTPRKDGERLISITTPTKFDSPSKLLSPTKFETP
SKLIATWSSISPRKMSSPRSKDQILNPALFDESCLLEVPSENRAMLQSSLASQRTYSILA
DDLAVSLTIPSPLKSDSHLSFLQPSSMHIMSTPDSVISAHISEDALMDGEDATEQDIHLA
LDTDNSSCGSSSSVDSDPLATPFVFKPDLPMQALVMERSNDHFIVKIRQAATGVDTTLTA
DDSLSRTLTEEDQQHGEDSETVQESQAKAVPSDRSQNRTPSNAVPSENHLSNHEESSGIC
QAATGSDLTQQESLTLTKDPPSRKEVKSSQRNTSKNSRKLSKSPKSLPEITSDNHLHSSA
QSVDQSVRRENMTDTADKCIGQTCHTEEDITTQQSPSKALLSKSDNSPHQPAESAETNQS
SQVLESHVSASARGDMEVSGGLTFTNSTPEKASSSSNKRKKHQEKSKAKRSRMEEEDSAE
EMFFNCKKDDSDSRSSPSSLSPSSLYAKNVIRKKGEVVMSWSRDEDRTILIELKMKGASR
ETFSALAEKLNKPSGQIAHRFYQLMKLFKKQEKMDT
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgttgacatgaatgatgcctctggcctcttggtacatgatgccaatgaagat
tctttggatatctacgacggtctggatgtctgttcgagcagcactgcagagaagtctcct
ccgaatgcttctcagctgaaagagtcgatggacctttatgaagaaatcgtcacagaggaa
cagcagagcagagagtcaacgtaccttgagttggagtccagattccaagcagctcagaac
caaattaaagagctccgcaggagactggagcagatggagatgcagaacactgggctgaac
acggagaaccaccgtctgaaaaagaacatctctgcactcttacgaacagctagacaggaa
gtgacacgaaaagatgctgagattcagagactgaaccagtggtcacagaaaggtcatcat
catcaatcttacaacaataataggtgggatcataattcatccagccggacctccatgggc
agctccaagagtaggcctcctcctccaccaccctccagtgctcggcctcctcctccacca
ccctccagtgctcggcctcctcctccaccaccatccagtgctctgcctcctccaccacca
tccagtgctctgcctcctcttcctcctcctccaccatttggtcttcctccccctcttcct
cctctactagcttcacctcccaggggggatcatcctccacgggaacctcctcaaccttcc
aggaaggagagcaatagttcctcctgtcaggtcagcggatcttcggttgagacgagagct
tcaaaagtgtcatctcacagtaatttaaaaagttcctcgagaggagattgtgatgtacct
gacaaacaggcagagcactctgtcagcaaatccagcagctgttcatcaacacgacacagt
gagtcagacaaacacaagtccaagcacagagaggaaaaatgtcagaaagtatctgaatca
acagatcggagacatagaactggttcagatcctgagaaaagcaggttgcacaaagcagac
cgagacatggggcggagacatgactccaagtcatgtaagagcaggagctacctaaatgct
gagcaccacagatcagagaggaccaaaagccctcctccagagattttatacagttcagcc
tcctctgatgacaagaaagggagaaatcgagaacagagacaagacaaaggcaaaacatcc
acaccagactctgaacacagcgcagctcacagctctaaagacggttacagccgagatcat
agaagaaacaagactagtgatggacacatcagaagatcagactcaaaggaccgcaaaaag
tcctcttcaaacaaacatgctgaaggatacagggactcctccaaagagagggaaggggac
agactgtcaaaggactatcaaagaaaggaggacagacaacgtgaagatgagaacaacaga
aagcataagtggagcagtttgtcagagacgagcagagaacgtgagaaacagagattaaaa
gaatcagaccaacctaaagttgatgtctgtagtaaggaaagaaaagaaaagacacaagag
gccttaaaaaagtcatctgaagaaccaaatgtcacagagaaaagctctgtggaggaaaac
agtccaaacaggaagctgtgcttcatggaaacgttaaatctaaccctttcacccattaag
aagccagcattgcccatggatgcgagccaggatgaccttaaactagcagacaagcgggtt
gaaagcagtccagacaatgagagttcacaacccaacgtcgaggacatgtgtgtgattgat
gaagtaaacagcagtgaacaagaagcagggttggaagatgttgcagagcaatcaccagat
acatccaaaactccacaatcagagaagacgcaggtgaggtgtgaagatgtgaaagatgtc
caagaagacaaaaatgaagtgaaaagtgaagctcctgcagctgatgagcaacttgaagac
cactcagtccagactacctcagctcatagccgacccctagatactgcagagaatcagccc
actgtgcagataacacaaggatcaccagagagaagttctttaaaagcaacagatgcagac
aaaaccaaactggtttcagacagccaagaagatgaatgtggacctctccaggctacagat
gttgccagtgacacccctgaaagcaaatctgggcaacacacaggcaacactttacagaaa
gtaaaccctggaaatgatactgacctgtctgctgctgtgaccaaacctgttgtgcttgat
tcaagcatagaactgaaatgtgcagtgctgaaaactgcagaacagaaaagcccggattca
gtcaaagaagttacagctgcttcaccgccaagggctggagatgtatccgacaagacaaga
ccccaaaacaagcaaacgtcacccactatcctacctcaggactgtcagcaaggatcgtgt
ccccctgcttccagttccattcacgagaaagatgctcgtcctttggaagatggtcctaaa
gatgcagacactgtgtccagtacaataagcctggaatcacttccacaagaggggctgagc
ctttcagaggctatttacgttttaactcagacgagcgaagatgcagacgacagcagcagc
atcacggccgagccgagttcctccaccggctgcattgctgtgtccaaagtcagcagtaca
acagaggagagcatgctgccagagaagtacagcgacctcactgtaacaccgaagaagaac
gtctttcctggaaagagtcatgagaataactttgagccttccagctctgtgccattactc
tatgatgaggactccatgatgcgcacgcttagcaatttgaagaggatccctgatgccatc
agccctctgagaagcccaatccggatcaccaagagaagtcatctccatgttcatggcaag
ccaggtcatgtcaagagccttcagaaagaattcaccagccctgttgatgccaactcgaag
aagttagatgtgaacaaagaaaacaaatatccgggttctccagcaaacaacgattcgcaa
aacttggtggacaaagtatccgacctgccttcaagcctctctgacactgaactggaagag
ggggagattttaagtgaaagtgatgagacagctgcagattctcctgttcctgcaaccaag
agggccaagttggcacgaccagtcagaaataaaccaagttctaagaccttgttgaacaag
acctctaaagaaaagcctgttgaaacgactggtgtgtcaacacgaagtccaaagagtcgt
tttaaaacagtttgtcctgcagcaaccaaagcctctttttccactatagatgaagtaatg
gagaccttcaagctggttcgtaccgagatccgaaaaaagtacatgaagcttcataaaacc
tttcccaagaagagcttctatggtgtgatggacaatttccaggagtcttttttagaattt
gtggatggtgctcattttggtcaaatttgcagtcaggaagtggagctgaagtccaagctg
aagaaactgattgtatctgtgtttagcaaagtattaaataatggtattgtgaaacgcatc
tttgaacagcaagcagttgatctgaagcaaaagttgtgggactttgtagatgtccaagtt
gactacttgctcaaggatgtttgcacagtactgaagagcctttgcaagccaacaaaagct
ccagccgaggacagtaagcccagtggaaatgagacaatatctagaaagccttctgcaaag
aagccacaatgtcaacaaaagactgcacaatctgctccgaccaacctaattcgactcaaa
cctcgtgctgtggcaccttacaaaacaggcctcggaagcagaggcaaagatatccgaatt
acacacacggacaaagacaggaatgttgaccctcatccaacaaatgtcccaaatccacaa
actgtggacgacttccttcctcctaaaactgttaattcaactccagagaaaactagcgta
tcgtctttggtggtctctcaaaatggctctttgcttgacagaactgactttgaactgctc
acagagcagcaagcctccagtttaaccttcaacctggtgagagacactcaaatgggagaa
atcttcaagtgtctcctgcaaggttctgacttactggagtccagtggcatcactggagac
aacacaacctggtcccttggtacaccaaggaaggatggcgagagactcatcagcatcacc
accccaactaaatttgactctccatctaaactgctttccccaacaaaattcgaaaccccc
tccaaacttatcgcaacatggtctagcatttcacctcgcaagatgtcgtctccgcgatcc
aaagatcagatcctgaatccagctttatttgatgaaagttgcttgttagaagtgccgtca
gagaacagagcgatgttgcagtccagcttggcttcacagaggacatattccattctagct
gatgatctggcagtctctctcaccattccatcgcctctcaagtcagacagccatctcagt
ttccttcagccatcaagcatgcacatcatgtctactccagacagtgtcatcagcgctcac
ataagtgaggacgctctgatggatggggaagatgctaccgaacaggacattcacctggcc
cttgacactgacaactcgagctgtggctccagcagcagcgtggactcggatccacttgcc
acgccgtttgtgttcaaacctgatctgcccatgcaagcgctagtgatggagaggtccaac
gaccacttcatcgtaaagattcgtcaggcagccacaggcgtagataccacgctcacagct
gacgacagtttaagtcgaacactaacagaagaagaccagcagcatggagaagacagtgag
acagttcaagaaagtcaagcaaaagctgttccgtctgacagatcacagaatcgtactcct
tcaaatgctgtaccctcagagaaccatctgtctaaccatgaggaaagctctgggatctgt
caggctgccactgggtcagatctcacgcaacaagaaagcttaacactaacaaaagatcca
cccagcagaaaagaagtgaaatcatctcaacgaaatacctcgaaaaattcacggaagctg
tcaaagtctccgaaaagtctacctgaaattacttcagataatcatttgcacagcagtgct
caaagcgtggatcaatcagtcagaagagaaaacatgacagacactgctgacaagtgcata
ggtcaaacatgccacacagaagaagacatcacaactcaacaaagtccatcaaaagctctt
ttgtccaagtcagataacagtccacaccaacctgccgaaagtgccgaaacaaatcaaagc
agccaagtgttggagtcacatgtgtcagcttcagcaagaggtgacatggaggtgtcagga
ggcctcaccttcacaaacagcaccccggagaaagctagtagtagcagtaataaacgcaag
aagcatcaagagaaatcaaaagccaagaggtccagaatggaggaagaggacagcgcggag
gaaatgttctttaactgcaagaaagacgacagtgattccagatcctccccatcatctctg
tcccccagcagcctctatgccaagaatgtcatccggaagaagggcgaggtggtgatgtca
tggagtagagatgaagatcgaactattctgatcgagctgaagatgaaaggagcttcacgt
gagactttctctgccttggcagagaaactcaataaaccatcagggcagatcgctcacaga
ttctatcagctcatgaagcttttcaagaagcaggagaagatggacacttga
DBGET
integrated database retrieval system
