Larimichthys crocea (large yellow croaker): 104926065
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Entry
104926065 CDS
T04659
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104926065 (zfr)
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104926065 (zfr)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
104926065
NCBI-ProteinID:
XP_010738144
UniProt:
A0A0F8D0M8
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Position
I:complement(20564663..20583815)
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AA seq
1072 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAATAAAYGGYQPTHAATDYGYPQRQPEV
PPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAVAAAQPQPSVADSYYQTA
PKPGYSQGVTSYTQSQQTRQVTVIKPAAPSPASSTFSIYPVTSTVQPVAAAASVVPSYSQ
SPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAVAAVAATAAWTGNTFTKKP
PFQSKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSNSSSG
SGGGVLARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMV
TQTSSSTTAAPSKTTTATLSSSSTTSSLCMAASSSPAMSSSPPYLKPVNIVSSGVAGVKN
PLANSMSAANSASAGKKVNAPKINFVGGNKLQTTAKIEDARAEAKVEASKTATPSTGTQD
PKNDVSDSLSSSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMH
LKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMR
RYEEDMYWRRMEEEQHHWDERRRLPDGGYPQGPPGLLGVRPGMPGLQPQGPVPPRRPDSS
DDRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQDKAKEEDKEKKEPSKDR
ALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKSLLARIVEHLPKQLTMVTPEKYEVK
GSIQEAAIILTSCTEPKMQVTITLTSPVIREENGQDGDVTSGMVKDPADVLDRQKCLDAL
AALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAISSASAPLS
PGDALRRVFECISSGILLPGGPGLVDPCEKKPVDTLTPMGEQQREDITSSAQFALRLLAF
RQIHKVLGMDPLPQINPRFNVRNSRKRRRDNSDGTDSFEGEGKKDKKDYDSF
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaattactttggatttacccatggcgctgccgcccagtacagt
cagcagccagctgctggggtggcatatacacatcccaccacagtggccagttacacagtc
caccaggcacctgtggcagcgcacactgttgcggcggcctatgctcccacggcagccaca
gttgctgtagctaggcctgctcctgtcgctgtggcagctgctactgctgcagcttatgga
ggataccaaccaacccatgctgccactgactatggctaccctcagcgccaacctgaagtc
cctccacccccaccaccggtcacctcacagaattaccaggactcctactcatatgtgcgc
tccacagctcctgctgtagcctatgacagtaagcagtactatcaacagcccactgctaca
gcagctgtcgctgctgcacagccacaacccagtgtggcagattcctactaccagacagcc
cccaaacccggatacagccagggggtaacgtcatacacccagagccagcagactcgacag
gtgactgtgataaagccagctgcgcccagtccagcctcatccactttctccatctaccca
gtgacctccactgtccagcctgtggccgctgctgcatctgtggttccttcttactcccaa
agcccaacctacagcacaaacgctgtcacctactctggaacctcatactctggctatgag
gcagcagtttactcagctgcctccagctactaccagcagcagcagcagcaacagaagcag
gcagtggcagctgtagcagcaacagcagcctggacggggaatactttcaccaagaagccc
ccattccagagtaagcagcttcgacccaagcagccgcccaaacccccccagatccactat
tgtgacgtctgtaagatcagctgtgctggcccacagacttacaaggaacatctagaaggc
cagaagcacaagaagaaggaagcggcactcaaagtctcccagagcaacagcagcagcgga
agtggtggaggagtgttggcccgtaatgctcagaaccagctccgctgtgaactttgcgac
gtctcctgcactggcgcagatgcctatgctgcccatatccgtggagccaagcaccagaag
gttgtgaagcttcatactaaactcggtaagcccattccctcgactgagcccagtatggtt
actcagacatcgtcctccaccacagctgctcccagcaagaccaccacagccaccctgagc
agctccagcaccaccagctctctgtgtatggctgcctcctcttcccctgccatgagctcc
agccccccctacctgaaacctgtgaacatagtcagcagtggtgtggcaggtgtcaagaac
ccattggctaacagcatgtctgctgccaactctgcctctgctgggaagaaagtcaatgcc
cccaagatcaattttgttggtggaaataaattacagaccacagcgaagatagaagacgcc
agagcggaggctaaagtagaggcttctaaaactgcaacgccttctacgggtactcaggac
cccaagaatgacgtttcagattctctgtcctcatccgctctggctgcactgcagagtgac
gttcagcctgtcggtcatgactatgtagaagaagtccgaaatgatgaaggcaaagtcatc
cgcttccattgcaagctgtgtgaatgtagtttcaatgatccaaatgcaaaggaaatgcat
ctgaaaggccggaggcatcgcctgcagtacaagaaaaaggtgaacccagatctgcaggtg
gaagtcaaacccagcattcgagccagaaagattcaggaagagaagatgaggaagcagatg
cagaaagaggagtactggagaagaagagaagaggaggagcgctggaggatggagatgagg
cgttatgaagaagatatgtactggagacgtatggaggaagaacagcaccactgggacgaa
cgtcgtcgtttaccagacggagggtatccacaagggcctcctggtctactcggagtccgg
cctggcatgccgggcctgcagcctcagggtcccgtgcccccacgtcggcctgattcttca
gatgaccgctacgtcatgaccaagcatgcagccatctacccctcagaagatgagcttcag
tctatccagaagattgtgtcgatcacagaacgtgcccttaaactggtgtcagacatcatt
acagaccaggacaaggccaaagaagaggacaaagagaaaaaagaaccttctaaagacaga
gccctgaagggagtgatgagggttggagtcttggccaaaggcttgctgcttcgcggggac
aagaatgtcaacctagtcttactctgctcagagaaacccaccaagagcctcctcgctcgc
attgtggagcacctccccaaacagctaacaatggtaacaccagaaaaatatgaagtcaaa
ggatccatccaggaagcggccatcattctgacatcctgcaccgagccaaagatgcaagtg
acaatcaccttgacttcacctgtcatcagagaggaaaatggacaggacggagatgtaact
tcgggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctg
gctgctctgcgccacgctaagtggttccaggctagagccaatggacttcagtcctgtgtg
atcatcatccgaatcctgcgagacctctgtcagcgagttcctacgtggtcgcccttccca
ggatgggccatggagctgctcgttgagaaggccatcagtagcgcctccgcccccctcagt
ccaggtgatgcactgagacgtgtctttgaatgtatttcatctgggattttactccctggt
gggccaggactggtagatccctgtgaaaagaagcctgtggatactctaacaccaatggga
gagcagcagagagaggacattacctcaagtgcccaatttgccctgaggctgctggcattc
cgtcagatccataaagttttgggtatggaccctctgccacagataaaccctcgcttcaac
gtccgcaacagccgcaagcgtcgccgtgacaacagtgatgggacagacagctttgagggc
gaaggcaaaaaggacaagaaggattatgatagtttctaa
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