Larimichthys crocea (large yellow croaker): 104928752
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Entry
104928752 CDS
T04659
Symbol
sdk1
Name
(RefSeq) protein sidekick-1 isoform X1
KO
K16353
protein sidekick
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104928752 (sdk1)
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
Sidekick 1/2
104928752 (sdk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
Pur_ac_phosph_N
ig
V-set
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
104928752
NCBI-ProteinID:
XP_027138731
LinkDB
All DBs
Position
X:complement(25754730..25973177)
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AA seq
2187 aa
AA seq
DB search
MVKRGICCSEGERVEGRAPAGNRQKMMGTGVTWSGSRCPLLFLLLLLGSSCHMLHGQEVA
PYLRGGGTRQQVVLEGNRLVLTCLAGGSWPLQYFWTLNNTNITDWTPQYRLSIPSLKRTD
AGLYQCMVRNRMGAVIHRRTEVQVAFLGSFSAEEQRKTVTQGRAAIISQPPLASFPRPLV
TWYKDGHKIIPNNRIAITLDNQLVVLATTAADAGRYHVEAVNEMTGENVTSPAVYLSTSV
GKKNRGSTDPESEVVAPTIVIGPKDTTVVTGSEATLECIANARPVDSLIVSWKRDGRRLA
SGHRLIIPAPTSSDTGLYVCEALLSNSTAKPVEARAHLTVMEPPSLTAQPKRKIFADLDR
NVDIPCLATGVPQPRIEWFKDAVPLSKLANPRYKVTAATGLTVRRVQPGDGGIFQCLARN
AAGETQAHTQLLVSSAAPAFTFPPSDQTVTDGNTALFTCQTTGAPKSAIAWSKGSQVLAS
GSVQVPRFTLLQSGGLEIQPISFQDSGEYTCIASNSEGTINATATLTVWSRTVISVPPTD
RRVIKGTTAILHCNATHDPRVNISFKWDRGGVLVLPTSGGRVSVRQGSLTIGQTWSGDIG
DYTCTVTSQAGNDSRSARLEVIELPHSPRSLTARLNDSDSRSVLLSWLRPFDGNSPLLYY
LLELSENNSPWKVYLSEVDPAVTAVSVGGLTPARTYQFRLCAVNQVGRGQYSAETQRLML
REEAPSAPPKNIVASGRTNQSIMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGDYQEKNIS
SPETNYCLLKDLIIWTQYQIQVAAYTGAGLGVYSSPVTEYTLQGVPTAPPQEVEVVAINS
TTIRFTWNPPPQQFINGINQGYKLLVWPEQSPEDATVVTITPDYPGARHTGLVSGLKKFT
WYFGSTLCFTTPGDGPRSIPTLLQTHEDTPGPVHHLSFTEILDTSLRVSWTEPEDKNGII
TGYVLWWEVSGVESSREERSLSNTTLQYQLTGLTSTTLYTLQVAALTAAGRGVVTSSTIS
TGVPPELPGAPSNLVISNISPRTATLRFRPGPDGKTAISRWIVEGQVVKEDRKEEVWSVV
YQKDNQPDADTLEIPNLSPFTQYRFRMQQVNIVGSSPMSAPSRVIQTLQAAPDTHPSNLT
LLSATQTSLCFSWKPLPESEYNSSPETVGYRLRVWRTDGQGEDRTENVEGAGGTTEVTLE
GLNPWTQYQIQIQAYNSIGPGPWSNTVAVRTAESVPSGSPVNVTAEAVSSSRILLTWSAL
SLAQKNGAILGYKVLYSEKDSEGPPSVQVAKGEGSLSLVLGALQKYTVYVLQVLAYTQIG
DGPPSNPILLRTKEDVPGPPVRMVFPEVRLSSVRVVWQPPTNPNGIILGYQISYRLDSRD
PQRWTTVEVGSNARQFTVTGLSPEQTYVFQLTARTAVGWGKEQEALVVTTERRERPQPPR
KLSVPQDGVESRCVRLHWVTGGSGSSPLRYFTLQVKELPSGDWNAHTADIPHNVTTWIAD
RLKPFTSYKFRMLATNDVGDSVLSKETEAVTTLQDVPDDPPVILAVKPTTTTSVLVQWKR
PSDDSINGMLTGYRLYYRELPVNTSTFTEAEVQATRNNTTSAFITTKSTFKTVSSASLTE
FELTQLKKFKRYQIVMTSYNIIGESPPSTPVEVSVGEAAPSVAPQSIRVSAVSPSILEVT
WDTPPLETQNGLIQGYKIHYWERDKQNQSEKVKVIFVPDTRVQLTNLTSYTPYLVALTAF
NTAGDGPPSDPRGARTLQSAPSQPSYLSFSEVTGGSVNVSWGAPLTPNGQLEGYRVIYQP
TAPVQGVSKVVTVDVRGSWQRWLKVRDLTKGATYAFSLQALTVSYGPPIQANITAQPVQG
SPGSPMEMSITKTSSALTIHWTEGDTGAAPVTGYVIEARPSDEGVWDSFIRHLPPSSRSV
SVPLERLRSGISYEFRVIAVNRYGYGQPSTPSTALAALSERPFYEEWWFLLVMALVGLIL
ILVLVFTLLLHGHSNKYKACGTGKHVSTAEESVTLDNGGFTALELNSRTLNTKNSFLKKN
GTRSPPRPSPGGLHYSDEDICNNYNGAVLTESTTLTEKPTEVSESELTDSDYEDEQPKHS
FVNHYMSDPTYYNSWKRQPKGLKGIGTPFGYEECATADTEPYYQTVVTQHSTGGAYTPTG
QPAHTHVNPNTNPPGSRTPVTGFSSFV
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacgagggatttgctgctctgaaggggaacgtgtggagggacgcgcaccagca
gggaaccgccagaagatgatggggaccggggtgacctggagtgggagccggtgtccgctt
ctttttctgctgctgctcctcggcagcagctgccacatgttgcacggacaagaggtggct
ccctacctgcgagggggtgggacgcggcagcaggtggtgttggagggaaacagactggtg
ctgacctgcctggctggaggcagctggcctctgcagtacttctggactctcaacaacacc
aacattaccgactggacaccacagtacaggttatctatcccgtctctgaagaggactgat
gctggcttgtatcagtgtatggtgaggaacaggatgggagccgtcatacacaggagaaca
gaggtgcaggtggcctttttggggagcttctccgccgaggagcagagaaagacggtgaca
cagggccgagcagccatcatcagccagcctcccctcgcttctttcccccgacctcttgtc
acgtggtacaaagacggacacaagataatacccaacaaccgaatagcaatcactttggac
aatcagctggtcgtcttggcaaccactgcagcggacgcaggacggtaccatgtggaggcg
gtgaacgagatgacaggagagaatgtgacgagtcccgccgtctacctgagtacctcagtt
ggcaagaagaaccgcgggtcaacagatcctgaatcagaagttgtggctccaacgattgtg
attggacccaaagacacaacagtggtgacaggcagcgaggctacactagagtgcattgct
aatgccagaccggtggacagcctcatagtgtcatggaaacgtgatgggcgtcggctggcc
agtgggcatcggctcattattcctgcccctacctcttctgacacagggttatatgtttgt
gaagcattgcttagcaacagcactgccaaacctgtggaggcaagggcacacctcactgta
atggagcctccttcgctgactgctcaacctaagagaaagatctttgctgatctcgacagg
aatgtagatattccctgcctggctacaggcgtgccccagcccaggatagagtggtttaag
gatgcggtgcctctttccaaactggccaaccctcgttacaaggtcaccgcagcaaccggg
ctgacggtgcgaagggtgcaaccaggagatggaggaatattccagtgcctggctcgcaac
gctgccggggaaacccaggcacacacacaactccttgtgtcaagtgcggcccccgcattt
acattccctccctctgaccaaacagtaactgatggcaacacagccttgtttacctgccag
acgaccggcgctccaaagtccgccatcgcctggagtaaaggatcacaggtcttagctagt
ggctccgtccaggttcccaggttcacgcttttgcagtcaggtggtttggagattcagcca
atcagcttccaggattcaggagaatacacctgcatcgcctccaactcggagggaaccatc
aacgccaccgccacacttaccgtctggagtcgtacggtaatttcagtgcctccaacagat
cggcgtgttatcaaaggaaccactgccatcctgcactgtaatgctacacatgaccccaga
gtcaatatcagcttcaagtgggatcgaggtggtgtgctggtccttcccaccagtggaggt
cgagtctctgtgcgtcagggttccctcactattggccagacatggtcaggtgacattggg
gattacacctgcaccgtgacatcacaggctggcaacgattctcgctctgcacgcctcgaa
gtcattgagctgccgcactctcctcgctctctgactgctcgtctcaatgactccgactcc
cgctccgtcctcctgtcctggctacgcccctttgacgggaactccccacttctctactac
ctgctggagctctctgagaacaactcaccatggaaggtctacctatcagaggtcgatcct
gcggtgaccgcagtatcggtgggcggactcacacctgccaggacctatcagttcagactc
tgtgctgtcaatcaagtgggcaggggtcagtacagcgctgagacacagagattgatgctg
agggaggaagcacccagcgcacctccaaagaacattgtagccagtgggcggacaaaccag
tccatcatggtccagtggcagcctccaccagaaccccagctcaacggagtcctccgggga
tacgtactcaggtaccgtctggctgggttgccaggggattaccaggagaagaacatcagc
agcccagagaccaactactgtctgctcaaagatctgatcatctggacacaataccagatc
caggtggctgcctacactggagccggcctgggcgtctacagcagccctgtcacagagtac
actctacagggagttcccacagcacctccgcaagaagtggaagttgtagccatcaactca
actaccatccgcttcacctggaaccctccgcctcagcagtttattaatggcatcaaccag
ggatataagctgctggtctggccagagcagtctccagaggatgctaccgtggtaaccatc
actccagactaccccggagcacgccacacaggattagtaagcggactcaagaaattcacc
tggtactttggctccaccctctgcttcacaacacctggagacggcccccgtagcataccc
accctactgcagacacacgaggacacacctggacctgttcatcatctgagcttcactgaa
atcttggacacatcactcagagtcagctggacagagcctgaagacaagaacggcatcatc
actggttatgtgttgtggtgggaagtgtccggcgtggagtcgagtcgtgaggaacgttca
ctgtccaacaccaccctgcagtaccagctgactggcctcacctccaccaccctgtacaca
ctacaggtggcagcgctcactgccgcaggacggggcgtagtcacatcctccaccatctcc
accggagtcccaccagaacttcccggtgcaccatctaacctagtcatctccaacatcagc
cctcggacagcaacacttcggttccgccctggtcctgatggcaagaccgccatatcacga
tggattgtagaaggccaggtagtgaaggaggatagaaaggaagaggtgtggagtgttgtc
taccagaaagataaccagccagatgcagacacactggagatccccaacctcagtccgttc
acccagtacaggttcaggatgcagcaagtgaacattgtcggctccagtcccatgagcgcc
ccctccagggtgattcaaaccttacaggccgcccctgacacacacccctctaacctcacc
ctgctgtctgccacacagaccagcctgtgcttcagctggaagcctcttccagagtctgag
tacaatagcagtccagagactgtgggataccggctgcgtgtgtggaggacagacggccag
ggggaggacaggactgagaatgtggagggagcagggggaaccactgaagtcacactagag
ggcctgaatccctggacccagtaccagattcagatacaggcctacaactctataggacct
ggaccatggagcaacactgtcgcagtacgcaccgcagaatctgttccatctggatctccg
gtgaatgtgaccgctgaggctgtgagctcctctaggatcctgctcacatggtctgcacta
tctctggcacagaagaacggagccatacttggatacaaggtgttgtacagcgagaaggac
tcagaaggtcccccaagtgttcaggtggcaaaaggagaggggagtttgtcgttggtcctt
ggggctctccagaaatacacagtgtatgtgctgcaggtgctggcatacacacagattggt
gacggcccccccagcaaccctatactgctcagaaccaaagaagatgtccccggcccccct
gtcaggatggtgtttccagaagttcgattgtcatcagttagggtggtttggcagccaccc
acaaaccccaacggcatcatattaggctaccagatctcctaccgtttggacagcagggac
cctcagcgctggaccacagtggaggtcggctccaacgctagacagttcaccgtcacagga
ctttcccctgagcagacctacgtgttccaactcactgctcgcaccgccgtgggctggggc
aaagaacaagaagccctggttgttaccactgaacgcagagagcgcccccagccgcccagg
aagttgtctgtacctcaggacggagttgaatctcgctgtgtccgcctccattgggtgacg
ggtggctcaggctcctcccccttaagatacttcactctgcaggtcaaagagctgcccagc
ggggactggaacgcgcacactgctgacatcccgcacaacgtgaccacctggatcgctgac
aggctgaagccctttacatcatacaagtttcggatgctggccaccaatgatgtaggagac
agtgtcctcagcaaagagactgaggctgttacaactctgcaggatgtgcctgacgaccct
ccagtgatccttgcagtgaaaccaacaaccactacctcagtcctggtgcagtggaagcgt
cccagtgacgacagcattaacgggatgttgactggataccggctgtattatagagagctc
ccagtaaacacctccactttcactgaagcagaagtccaggcaaccagaaacaacaccaca
agtgccttcattacaaccaagagcacctttaagacagtcagcagtgcctctctaacggag
tttgagttgacacaactaaagaagttcaaacgctaccagattgttatgacaagctacaat
atcatcggagagagcccaccttccactccagttgaggtgtctgttggagaggcggctcca
tcggtggcccctcagtccatcagagtatcagctgtgtctccctccatccttgaagtgacc
tgggacacaccccccctcgagactcaaaatggactcatccaaggatacaagatccactac
tgggagagggataaacagaaccagagtgagaaggtcaaagtgatttttgtcccggacacg
cgtgtgcaactcacaaacctgaccagctacacaccttacctggtcgccctgactgccttc
aacacagctggagacggcccacccagtgacccccgaggggcccgcaccttgcagtctgct
cccagccagcccagttatctgtccttctcagaggtgacaggaggaagtgtcaatgtctcc
tggggagctccactcactcctaatggacagctagaaggctacagagtcatctaccagcct
actgctcctgtacaaggagtgagtaaagtggtgacagtggacgtgagaggcagctggcag
cgatggctgaaggttcgagaccttaccaaaggagcaacgtacgcattcagtcttcaggct
ctcaccgtcagctacggaccgccaatacaagcaaacatcactgctcagcctgtgcaaggc
tcccctgggtcacccatggagatgtccatcaccaagacatcctctgcgctcactatccac
tggacagagggagataccggtgctgcacctgtgactggatacgttatcgaggctcgtccg
tcagatgagggagtgtgggattccttcatcagacatctccctcccagcagcaggtctgtt
tcagtgccgctggagcgcctgaggtcggggatcagctacgagttcagagttattgctgtt
aatcgctatggttacggacagccgagtacaccctccactgctctagctgcgctgtcagag
cgtccattctatgaggagtggtggttcctgctggtcatggctctggtgggactcatcctc
attctggtcctggtcttcactctactgctgcatggacacagcaacaaatacaaagcctgc
ggcacagggaagcacgtgtccacagcggaggagtcggtaacactggacaacggaggtttc
acagctctggagctcaacagcagaacgctcaacaccaagaactcctttctgaagaagaac
gggacgaggtctcctcccaggcccagtccaggtggtctgcactactctgacgaagatatc
tgtaacaactacaacggagccgtgctcactgagagcaccacgctcacagagaaacccacg
gaggtctctgaatctgagttaacagacagcgactacgaggacgagcagccaaagcactcc
ttcgtcaaccactacatgagcgatcctacttactacaactcctggaagcggcagcccaaa
ggccttaaagggatcggcactcctttcggctacgaggagtgtgccactgcagacacggag
ccctactaccagaccgtggtcacccagcacagcacagggggggcgtacacacccacgggg
cagcctgcgcacacgcacgtcaaccccaacaccaacccgccggggtcacgcaccccagtg
acgggattctcctcattcgtttga
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