Larimichthys crocea (large yellow croaker): 104929196
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Entry
104929196 CDS
T04659
Symbol
aire
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104929196 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104929196 (aire)
04121 Ubiquitin system [BR:
lco04121
]
104929196 (aire)
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
104929196 (aire)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104929196 (aire)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSR
PHD
Motif
Other DBs
NCBI-GeneID:
104929196
NCBI-ProteinID:
XP_027147549
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Position
II:13919789..13926106
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AA seq
504 aa
AA seq
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MSRVEALKDTNLRSLLRELRTDIAMAVDDPFPLVYGLADKNIITDQLLKDTLEKEDREGI
HKALYSLLSWILEQSRSTVQAFWSNLSKDYNLDSYPKLQTLLTNLHSSIQRSRRDAAGSR
GEKKSSGGHKTPHMKKRSHEDREPNSHNQQPQYHAKTRGKVKLYRVKSEAPAPQPTSGNG
VQAVSSSVHRPVTLSSSSSASTTEPAVSHEAREVIHIKQVFGSDDKTVGAARKCIKVGGE
FYSCGQSEEINGAAETTFHHKRETNTAMVQYNDDECAVCKDGGELICCDGCPQAFHLTCL
DPPLTSIPSGPWQCEWCRGNRVKTETAQLPLQPLIAQPQQTNVSSSNSITDVSFFSPLSS
STLTGVTASMNGSSGRNQCSGGELVSSREVCGVCHLAGGDLTRCLQCLGHFHAHCHFSKG
RSICSSCLRPWGSSAEKEAESRGLQLAPVVQNTLSHDQSSSIPEHVLHKDELDSILGDGS
IDGILQWAFHNITRPLPDSQGCYQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagtcgaagctttaaaggacacaaaccttcgctccctgctgagggagttgcgg
acagatattgctatggctgtagatgacccattccctctcgtctacggtctggcagacaaa
aacatcatcacagaccaactactgaaggatactttggagaaggaggacagagaagggatc
cacaaggccctgtattctctcctgtcctggatcctggagcagagcagatccactgtccag
gctttctggagcaacttgtccaaagactacaacctggacagctaccccaagctgcagaca
ctgctcactaacctacactcaagtatacaaagatcaagacgggatgctgcaggttctaga
ggtgaaaagaaatcctctggaggccataaaacacctcacatgaagaagaggagccatgaa
gacagagagccaaactcacacaatcagcagccgcagtatcatgccaagacaaggggtaaa
gtgaagctttacagagtgaagagtgaagctccagctccacagccaacatctggaaatggt
gttcaggcggtgtcctcctcagtccacagaccagtcaccctgtcttcctcctcttctgcc
tccacaactgagccggcagtcagccatgaagccagagaggtgatccacatcaagcaggtg
tttggctcagatgataagacagtgggagctgccagaaagtgcataaaagttggaggggag
ttttactcctgtggtcaatcagaggagataaacggagctgctgagactacatttcaccac
aagagggagacaaacacagccatggttcagtataatgatgacgagtgtgcagtttgtaaa
gatggaggggagctgatctgttgtgatggctgccctcaagcttttcatctgacctgcctg
gaccctccactcacatccatccccagtggtccctggcagtgtgagtggtgccgtggcaac
agagtgaaaacagagacagcccaactacctttacaaccgctcattgcacagccacagcaa
acaaatgtgagctccagtaactccatcacagacgtctccttcttctccccgctgtcatcc
tcgactctcaccggcgtcacagcttcaatgaatgggtccagtggcagaaaccagtgctca
ggtggagagctggtcagttcgagggaagtgtgtggtgtttgtcacctagcaggaggagat
ctgacccgctgcctccagtgtttggggcatttccacgcacattgccacttctccaaaggg
agatcaatctgctcgtcctgcttgaggccctggggcagctcagcagagaaggaggctgaa
tccagaggcttacagctcgccccagtggttcaaaatacactcagtcatgatcaaagctcc
tccatccctgagcatgtcctacataaagatgagctggactccatcctgggagacggctcc
attgacggcatcttgcagtgggctttccataacatcactcggcctcttccagactctcaa
ggatgctatcagtga
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