Larimichthys crocea (large yellow croaker): 104930237
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Entry
104930237 CDS
T04659
Symbol
setd1a
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00310
Lysine degradation
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104930237 (setd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104930237 (setd1a)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
104930237 (setd1a)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104930237 (setd1a)
HMT complexes
COMPASS/SET1 complex
104930237 (setd1a)
COMPASS/SET1 complex (yeast)
104930237 (setd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
104930237
NCBI-ProteinID:
XP_019130665
LinkDB
All DBs
Position
XII:complement(5367232..5385303)
Genome browser
AA seq
2207 aa
AA seq
DB search
MDPDGGAETQRAVSLQWKSYKLVQDPTIRRVTQKIYRYDGVHFSVPDSGFPPVGELRDPR
PRRLWSRYTELSLPVPKFKLDEFYVGPIPLKEVTFARLNDNIKEPFLAEMCAKFGEVEEM
EILFHPKTRKHLGLARVLFTSTRGAKDTVKQLHNTSVMGNIIHAQLDIKGQQRQKYYDLI
VNGSYTPQTVPLGGKALTDRVQPQAPTQPQPQPQPDTSSEIRRRLSSELAVLAAGVQALT
SGNITPCSADTGYSEQRLDTPPSSMAGSSASSQGGGGTPYSSRSGTPFSQESGYTGGRHT
GGYNTGTGSGYPPQDMLPSSSSSSAVSSTVGGYKVSRYSEDAQEPSVYHRGRPMYPPTAS
YRPNEPPCYPPYSSVGGPGPHMAHHSSMPPPPLATQYDQPPMADRDRDRDRDSGGRYGAA
GIGSRRSSYHHQQDTNSSSKYHSHHSHHHSERRDERGYRRDSLGSRSGDHSHQRHRNHHH
SHNHHGSGSRRRSSHDRDRDRDRDRDRDRDRDRDSDYSNSSDPRYNSNSYRSSSNSMSPP
PSSYSAYSSKEPAPAPPQGLDASTRLGGTGLAERGSLPSVGTDKDYQAGHHSALPPPPPP
PPPLPPASVIAAAVAETLGTLDFNQDSPAREEQWTKPKRRPSTPPAPPKTPPPSSPPHPS
IASSSTSPSSTSLPHHLPSSSSSPPPPQRDSSSPEPDSTNESLPFVYHSSSLDSRIEMLL
KEQKAKFSFLASDEEDEEDRKEEKQRGIRGDGGERRGVSGDLSGEHISGNQVGDNGEKDH
RRKGERDRDGHRGRKRGKGGEGRKSPTIITATTPSSSTYASHILPPEEPQPQVSLTGTGT
LQEESSQAGSADTRSRIGAHTPPYNGQSQSSPHSSGEDMEISDEEEEETTITTVTTHQPS
VTSGSSPSSSQAAMPSQTTDPSSSPPPISDTAQHFGTSMHPPIPSYPPHLPPPPPPGYSL
QPPPPPGIPPLAHMELHPEYPPPMPHHMYDYATSMELMNQYSGGAPMSFQMQTHMLSRLH
QLRMSSTNGTPGPGEAATADYTSYHLHSMAPPHTHHPYMDQEGSGAGSHYDQDHRYMPQH
MPYPYADPHSSQIPPPPHHGIPPPHTAWPPHVIPPHYASYMPPPGYGTMLPGDGTEYRAP
GEEMPMLAENPHEATVQMVLGTLIQEMKNIMQRDLNRKMVENVAFATFDEWWERKETKAK
PFQTMVRGVSALRDDEKKEEKVNRPREPLTSLVDWAKSGGMEGFSLRGALRLPSFKVKRK
GPQELEEGDMKRQRPSTPPDEDDEAAEGRMPEADRHGAERDNKRRKKKPRSRKPWELGSE
GEETSDGSSSEKEDEEESEKGSDDDALSADSDDESLSSSSEGSSSSGSSSSSSSEDEDEE
EVEGLDSMDESTMDSTTEKEDDGANNAAAVSKAEVKTGEAKDSKADTTAAPTKRPPSPPY
PRPSSPIVLVPPLKKRRKTVSFSTAENDSKTQPPTAPLSPSLSQVAGESPLLSPGRPTDS
PITATPSPSPRPTQGIQLLPFASKPGEGNALIVPPSGRTQDSDETKKGPPVSPQTTPVKS
PGKRGAGKDSPKSPAPPVMVCRTVQNLPLDHASMCRMAFEEAPPPPPVNKRSRGRPRTTS
LSAPSCHSLREEDDEEESEQRLRLREQLGASSLLQLAAASTTDLSVLADVALKMDPDAGD
SEETETSDEAEEQKMEEDLFSPESLALVMSPDGVIVLMEHNYCKPPVLTVPSSSKRTSSK
QDSSVLLPADLNTISGVLEAPEEVIGEALPSRGDTGEYLPTMGVLCESEDVGQALPPSSK
KIVAGKGFEFENDKSKKRRRKDKENIEIHHTKKQKEQPGKKQRKRKLEDSDFEEDVDVEE
LESGELSSSDTEDEMVEEVRKSERLFLQEAGITSSQRWPKPIPAPEPLALKFENRSEFEQ
MTILYDIWNSGLDGEDLMLLKKTYEKLLQDDHSSDWLNDTHWVSHTVTNLPNPRRKKKNT
SGQLREHVTGCARSEGYYAISRKEKDVYLDLDLPEQVIREVENVDTSGANRVLSERRSEQ
RRLLTVIGTTAVMDSDLLKLNQLKYRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQ
NIRQMVADNREKRYAQQGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITI
ESQKKIVIYSKQAIAVNEEITYDYKFPLEENKIPCLCGTENCRGTLN
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atggatccagacggtggggcagaaacacaaagagctgtcagtttgcagtggaagagctac
aaactcgtccaggatccaactattcggcgggtcacacagaaaatctacagatatgacgga
gtgcatttcagtgtgccggactctggatttcctcccgtgggtgaactgcgggaccctagg
ccccggagactgtggtccaggtatacagagctgtccctgcccgtgccgaagtttaagctt
gatgagttctatgtgggtcccatacccctcaaggaggtgacctttgccaggctcaatgac
aacatcaaggagcctttcttggcagagatgtgtgccaagttcggtgaggtggaggaaatg
gaaatcctgtttcaccccaagaccaggaagcacttgggccttgccagggtgttgtttact
agcaccagaggagccaaggacacagtcaagcagctgcacaatacttctgtcatgggtaac
atcattcatgctcagctggatataaaaggccagcagaggcagaagtattatgacctgatc
gtaaatgggtcctacactcctcagacggtgcccctgggaggcaaggctttgacagacagg
gtccagcctcaggccccaacacagccacagccacagccacagcctgacacgtcatcagaa
atcaggcggaggctctccagtgagcttgcggttttggcagcaggggtacaggccctcaca
tcaggaaacatcaccccttgttctgcggataccggttacagcgaacagcgtctggacaca
cccccctcttcaatggcaggctcctctgcctcatcccagggaggtggaggaacaccttac
agctccagatctgggactcctttctcgcaagagtctggctacaccggtggcaggcatact
ggcggctacaacactggcactggcagcggctaccctccccaggacatgctaccttcctct
tcctcgtcctctgcggtctcttctactgttggaggatacaaagtgtctcgctactctgag
gatgcacaggaaccttcagtgtatcatcgaggtcgccctatgtatcccccaactgcatca
taccgtcccaatgagccaccatgctaccctccatactccagtgttggggggcctgggcca
cacatggcacatcactcctcaatgcctcctccgcctcttgccacccaatatgatcagcct
ccaatggcagacagggaccgagaccgtgatagagactcagggggccgctatggggccgcg
gggattggctccagaaggtcatcttaccaccaccagcaagacacaaactcttcatcaaag
taccattcccatcactcccatcaccactcagaacgcagggatgaaagggggtaccggcga
gacagcctgggctcccgttcaggtgaccacagccaccagagacaccgtaaccaccaccat
tctcacaaccaccatggcagcggtagccgcagaaggagcagccatgaccgggacagggac
cgagatcgagacagagaccgcgatagagacagggacagagacagtgactactccaacagc
tctgacccaagatacaattccaactcttaccgctcttcctctaacagcatgtctcctccc
ccctcgtcttactctgcatactcctccaaagagcctgccccagcccctcctcagggattg
gacgcttccacccgtctagggggcacaggcctggcagagaggggctccctgccttcggta
ggcactgacaaagactaccaggctggtcaccacagtgctctacctccacctcccccaccg
cctcctccactcccacctgcctcagtcattgcagcggctgtagccgagacacttggaaca
ctggacttcaaccaggatagtccggcccgtgaagagcagtggacaaaacccaaacgccgt
cccagcaccccacctgcacctccaaagacacccccaccttcctctccaccccatccctcc
atcgcatcctcttctacatccccgtcctctacctccctcccacaccatcttccctcctcc
tccagctccccgccaccccctcagcgcgactcttcctctccagagccagattccaccaat
gagagtttaccgttcgtctaccacagcagcagccttgactctcgtattgagatgctccta
aaggaacaaaaggcaaaattttctttccttgcctccgatgaggaagacgaggaagacagg
aaagaggagaagcagaggggcatacgtggggatggaggagagcgaagaggtgtgtcaggt
gatctatcaggggagcacataagtggtaatcaggtgggagacaatggggagaaggaccac
aggagaaaaggggaaagagacagagatggccacagaggaaggaaacggggaaagggtgga
gaaggtaggaagagtcctacaataattacagcaaccacaccatcctcctccacctacgct
tcccacatcctgcccccggaggaaccccagccccaggtcagcctcactgggactggaact
ttgcaggaggagtcttcacaagctggatctgctgacacacgtagcaggataggagcacac
acaccaccgtacaatggacagagtcagtcctcccctcattcctcaggggaagacatggag
atctcagacgaggaggaggaggagactaccataacaacggtgaccacccaccagccctca
gtcacctcaggttcttcaccctcttcatcccaggctgccatgccctcacaaacaacggac
ccttcatcttcacccccacccatctctgacactgcacagcactttggcacctccatgcac
cctcccataccttcctacccccctcatttgcctcccccacctcctcccggttactccctc
cagcccccacctccacccgggatccctcccctggcccacatggagctgcaccccgagtat
cctcctcccatgccccaccacatgtatgactatgccacctccatggagctgatgaaccag
tacagtggtggagctcctatgtcctttcaaatgcagacccacatgttaagtcgcctacac
cagctgcgcatgtcgtcaaccaacggcaccccaggtcctggtgaggcagccactgcagac
tacacctcctaccatctccactctatggcaccaccccacacacaccacccctacatggac
caagagggaagcggggcaggctctcattatgaccaggaccaccgctacatgccccaacac
atgccctacccttacgctgacccccacagttctcagataccaccccctccccaccatggc
atcccgcctccccatactgcctggccgccacacgtcataccaccacactacgcctcttac
atgcccccgccaggatatggcaccatgctgcctggggatggaaccgagtacagggctcca
ggggaggagatgcccatgctggcagagaatccacatgaagccaccgtgcagatggtgctg
ggcactctgatccaggaaatgaaaaacatcatgcagagggacctgaatcgcaaaatggtg
gagaacgttgcttttgcaacttttgacgagtggtgggagaggaaagagaccaaggccaag
cctttccagacaatggttaggggggtgtctgccttacgggatgatgagaaaaaagaggaa
aaagtcaaccgtcctcgggagcctctcacgtctcttgtggattgggcaaagagtggtggc
atggagggattttctctcaggggagcgctacggctgccttccttcaaggtgaagaggaaa
ggacctcaagaattggaagagggagatatgaaaaggcagcgaccctcaaccccaccagac
gaggatgatgaagctgctgaagggagaatgccagaggcagacaggcatggagcagaaagg
gacaacaagaggaggaaaaagaagccaagaagtcgtaaaccttgggagcttggcagtgag
ggagaggaaacgtctgatggctcatcgagcgaaaaggaggatgaggaagaaagtgaaaag
gggtctgatgatgatgccctcagtgctgatagtgatgatgagagcctctcctcatcctct
gagggatcttcctcttcagggtcttcctcttcatcttcctctgaagatgaagatgaagag
gaggtcgagggactggacagcatggacgagtcaacaatggacagcacaacagagaaagag
gatgacggggcaaacaacgcagctgccgtttcaaaggcagaggtcaaaacaggtgaagcc
aaagacagcaaggcggatacaacagcagcacctaccaagcgtcctccatcacccccatac
ccgcgtccatcgtcccctattgttcttgttccccctctcaagaaacgcaggaagaccgtc
tcgttctccacagccgagaacgacagcaaaacgcagcccccaactgcgccgctgtctcca
tccctgtcacaagtggcgggtgaatctcccctcctctcccctggcaggcctacagactcc
cctatcactgctaccccatccccctcacctcgtcccactcagggcatccaactgctcccc
tttgcctccaaacccggtgaaggcaacgccctcatcgtgcccccatctggacggacccaa
gattctgatgagaccaaaaagggaccacctgtttctcctcagaccacccctgtcaaatca
cctgggaaacgtggagcagggaaagactcccccaaatctcccgcccctcctgttatggtg
tgccgcactgtgcagaacctgccgttggaccatgcctctatgtgcaggatggccttcgag
gaggcacctcctccacctcctgtcaacaaacggtccagaggcaggcctcggacgaccagc
ttgtctgctccttcctgtcactccctcagagaggaagatgatgaggaagaaagtgagcag
aggttgagactcagagagcaacttggggcatcaagcctcctgcagctggccgcagcttca
accaccgacctgtctgtgttggctgatgtagccctgaaaatggaccctgatgctggggac
tcagaggagacagagacctctgatgaggcagaagagcagaagatggaagaggatctcttc
tccccagagtcactggcccttgttatgagcccagacggtgtaattgtccttatggagcac
aactactgcaaaccccctgttctcacagtaccatccagtagcaaaaggacttcctccaaa
caagactcctctgtcttgctcccagcagacctcaacactatttctggggtgcttgaagca
ccagaggaagtcattggagaagcgctaccatccaggggagatacaggagaatacttacct
acaatgggagtgctttgtgagtctgaggatgtgggccaggctctacctccatcatcaaag
aagatcgtggctggcaaaggtttcgaatttgaaaatgacaagagcaaaaagaggagaaga
aaagacaaagaaaacattgagattcatcacacaaaaaaacagaaagagcagccaggcaag
aaacagaggaagcggaaactagaggactccgactttgaggaagatgtggatgtggaggag
cttgagtctggggagctctccagctcagacacagaggacgagatggtcgaagaggtgagg
aagagcgagcgcctctttctgcaggaggcagggataacgtcgtcccagcgctggccaaag
cctatcccagcacccgagccattagccctgaagtttgaaaaccgcagtgagtttgagcag
atgaccatcctgtatgacatctggaactctggtctggacggagaagacttgatgttactg
aagaagacttatgagaagctactacaggatgaccacagctctgactggctcaatgatact
cactgggtcagccacactgtaaccaatttgccgaaccctcggcgtaagaagaagaacaca
agtggacagcttcgtgagcatgtgaccggttgtgccaggagtgagggctactacgccatc
agccgcaaggagaaggacgtctatctggacctggacctacccgagcaggtcatacgggag
gtggagaatgtcgacacctcgggagctaacagggtgctatcagagagacgatcagagcag
cgccgcctcctcaccgtcattggcacaacggccgtcatggactctgacctgctcaaactc
aaccagcttaagtaccgcaagaagaagcttcgttttggacgcagcaggatccacgagtgg
ggcctgttcgccatggagcccattgctgctgatgagatggtgattgagtatgtgggtcaa
aacatcagacagatggtggctgacaatcgagagaagcggtacgcacagcagggcatcggg
agcagctatttgttcagagtggaccacgacacaattatagatgccaccaagtgtggaaac
ttggcacgattcatcaatcactgctgcactccaaattgctacgccaaggttatcaccata
gagtcccagaaaaagattgtgatctactcgaagcaggctatcgctgtcaacgaagagatc
acctacgactacaaattccccctcgaggagaataagattccttgcctgtgtggaacggag
aactgccgcgggacactgaactag
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integrated database retrieval system
