Larimichthys crocea (large yellow croaker): 109140514
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Entry
109140514 CDS
T04659
Symbol
plcd1
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X1
KO
K05857
phosphatidylinositol phospholipase C, delta [EC:
3.1.4.11
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00562
Inositol phosphate metabolism
lco01100
Metabolic pathways
lco04020
Calcium signaling pathway
lco04070
Phosphatidylinositol signaling system
Module
lco_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
109140514 (plcd1)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109140514 (plcd1)
04070 Phosphatidylinositol signaling system
109140514 (plcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
109140514 (plcd1)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
109140514 (plcd1)
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
109140514 (plcd1)
Endocytosis
Macropinocytosis
Phospholipase C
109140514 (plcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_like
EF-hand_10
C2
PH
EF-hand_6
EF-hand_7
PH_12
EF-hand_1
TEP1_N
Motif
Other DBs
NCBI-GeneID:
109140514
NCBI-ProteinID:
XP_019123027
LinkDB
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Position
XXIII:9832785..9846527
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AA seq
776 aa
AA seq
DB search
MSCLHKRPKRTTSEEQVFLEKVRKIAQENGKRLGLEGDEDLQFLLVGGELVKIRSSSWKK
NRFFKLQEDCKTFWHESHKTFRRNQTFSVDDIDSVRKGRQSEVLNKHTEPSVEEKCFSII
FKGRKKNLDLMAASGPEAKQWVSGLEKIIFNMRNLSHQQKSEHWIVNCMRKADKNEDNKM
TLKELKHFLRQINVEVDDTYAADLFKQCDTSNSGTLEDSEIQHFYSLLTHREEIDVIYGK
FAETEGQMSARNLLDFLLNEQREEASTMADALKLIEKYEVDATAKQKKHMTKDGFLMYLH
HEDGSILNPAHKNVYQDMNQPLNHYYISSSHNTYLMEDQLKGPSSTEAYIKALMKSCRCV
ELDCWDGANGEPVIYHGYTLTSKVLFKDVIKAIKDYAFKTSEYPVILSLENHCTVDQQKI
MAHHMISILGDALVTKPLGNTLPTNFPSPEELKGKFLIKGKRLNKLDAIFNNNNTLEEDT
VSEEDEAADCKENGQKAKPKKSKIKLAKQLSDMVIFCKSVHFNGFEHAKDNHSFYEMSSF
KEGKAFNLADTSATAYIHHNMDKLSRIYPAGSRTDSSNYNPVPMWNVGCQIVALNFQTPS
KEMDLNQGRFLPNGCSGYVLKPEFQRNLSSQFNPSTLTEGPWLKKKTFHVMVISAQQLPK
INKDKHKSIVDPLVRVEIYGVATDNASKETHYIENNGFNPMWNERFQFDIHVPELAMVRF
VVEDYDSTSQNDLIGQYCLPLTSVQNGYRHVPVLTKSGDVISSAGLFVHLMLIDAQ
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcttacataaacgtccaaagaggacgacatccgaggagcaggttttcctggag
aaggtgagaaaaattgcgcaggagaatggaaaacgcttaggtttggagggagatgaagat
ctacagttcctgctggtcggcggggagctggtcaagattcgctctagctcctggaagaag
aaccgcttcttcaaactgcaggaagactgcaaaacattttggcatgaatctcacaaaaca
ttccggcgaaaccagaccttttccgtcgatgacatcgattcagtgcgcaaaggccgccag
tctgaggtgcttaataaacacaccgagcctagcgttgaagagaagtgcttctccataatc
ttcaagggccgcaagaagaatcttgacctgatggcagccagtggaccagaggcgaaacag
tgggtcagcggcctggagaagatcatcttcaacatgcgcaacctcagccaccagcagaag
agtgagcactggatagtcaactgcatgcgaaaagcagacaagaatgaggacaacaagatg
accctcaaggagctgaaacacttcctgcgacagatcaatgttgaagtggacgatacttac
gcagcagaccttttcaagcaatgtgacacgtccaattcggggaccttggaggactcagag
atccagcacttctacagcctgctgacgcaccgggaggagatagatgtgatttatgggaag
tttgctgaaacagaaggtcagatgagcgccagaaatcttctggacttcctgttaaatgag
cagagggaggaagcgtccaccatggcggacgccctcaaactgattgaaaaatacgaggtg
gatgcgacagcgaagcagaagaagcatatgaccaaagacggcttcttgatgtacctgcac
catgaggatggctccatcctcaacccagctcacaaaaacgtgtatcaggacatgaaccaa
cccctcaaccattactacatctcctcttcacacaacacatatctgatggaggatcaactc
aaaggacccagcagcacagaagcctacataaaagcgctgatgaagagctgtcgctgtgtg
gaactggactgctgggacggggctaacggcgagcctgttatttaccacggctacacactc
acatccaaagtgctcttcaaagacgtcataaaagccatcaaagattacgccttcaaaacg
tctgagtacccagtgatcctgtccctggagaaccactgcaccgtagaccaacagaagatc
atggcccatcacatgatctccatcctgggtgacgctttagtcacaaaacctctgggcaac
accctgcccaccaacttcccctcaccggaggagctgaagggcaagttcctcatcaaggga
aagagattgaacaaactagatgctatcttcaacaataacaacactttagaggaagacacc
gtgtctgaagaggatgaggctgcagattgtaaggagaatggacaaaaagccaaaccaaag
aaatccaaaatcaaacttgccaaacagctctcagacatggtcatcttctgcaagagtgtc
cattttaatggctttgaacacgccaaggacaaccatagcttctatgagatgtcgtccttc
aaggagggtaaagctttcaacctggctgatacttcagctactgcctacatccatcacaac
atggacaaactcagtcggatctacccagcgggctcgagaactgactcctccaactataac
ccagtgcccatgtggaacgttggctgccagattgtggcgttgaacttccagactccctcc
aaggagatggacctaaaccagggtcggtttctgccaaatggttgtagtggctacgtcctg
aaaccagaatttcagagaaacctgtcctctcagtttaatcccagcacattaaccgaaggg
ccctggctaaagaagaagacctttcacgtcatggtgatctcagctcagcagttacctaaa
atcaacaaggacaaacacaaatccatcgttgaccctctggtaagagtggagatctatggg
gtcgcgacagacaacgccagcaaggagacacactacattgaaaacaacgggttcaaccca
atgtggaatgagagattccagtttgacatccacgttccagagctggccatggttcgattt
gtggtggaggactatgactcaacgtcccagaatgatctcatcgggcagtactgtctacca
cttaccagtgtacagaacggatatcgccacgtcccagtgttaaccaaaagcggagatgtc
atcagctcagccggactgtttgtgcatctcatgctcatcgacgcccagtag
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