Lysobacter capsici: LC55x_0373
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Entry
LC55x_0373 CDS
T04162
Name
(GenBank) peptidase MA superfamily protein
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcp01002
]
LC55x_0373
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lcp02042
]
LC55x_0373
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
LC55x_0373
Peptidases and inhibitors [BR:
lcp01002
]
Metallo peptidases
Family M9
LC55x_0373
Bacterial toxins [BR:
lcp02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
LC55x_0373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PKD_4
PKD
PPC
Peptidase_M61
Motif
Other DBs
NCBI-ProteinID:
ALN83678
UniProt:
A0A0S2FJA2
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All DBs
Position
405937..408555
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AA seq
872 aa
AA seq
DB search
MLGLAVSVVSCFSYALPWASMLESVQARVAAPTAQAPSSADSRSLVAAVNSQAPMAPSRA
TAIAGLPRQPATERQLFGEHRQDRARAPSRRAPQQPSLVDRDDSAYDGAQSRRDLLRRPS
FAHTSARAKAAACDPNAFGALSGTALVGAVKAASTDCINQLFNVSGPNAYATFREAQMVS
VADAFATSARAYDGTNADSTLQLVLFLRAGYYVQYYDSSVGAYGAPLRNAIRSALDAFAG
NARFGLVNDVHGEVLAEFVTLIDSSGENARYLSVVKRLLDGYNASYNAFYWMKVAVNNAY
TITFRGHQDAAFRALVQTDSSIVETLYGFADRNFGLLGGDNAYLVANAGRELGRFLQYDG
ALKTLTRARVKALIDRSAVTGPTARLWVGVGEMVDYYDQANCAYYGLCGFVARVEAAALP
IRHTCSPTLRLRAQSMSAAELASTCATVAGQETYFHNALATGGAPVNGDGNASLEMTVFD
SSDDYGIYAGAIYGIDTNNGGMYLEGDPSLPGNQARFIAYEAEWLRPQTFEIWNLTHEYV
HYLDGRFNMWGDFEDAIAQKTVWWIEGFAEYLSYSYRGVVNEGARDEAARATYTLSKVYQ
NDYNSGQTLVYRWGYLAVRFMFEQRHDQVNAILGYFRPGNYTGYATYMGSLGSSNDAAFR
AWLPCVAQPDSPNCGTTPNQPPVAGFGFAISGLTVNFSDSSSDADGRIVSRNWTFGDGST
STATNPSKTYANAGSYTVQLTVTDDRGASHSLSKTVAVSAPSLPECVGNDVRVLGKNCAR
SNVAASAGNYAYFYLYLPAGTSQLSFASSGGSGNADMYASTRNWATRESYQYRSTNAGNG
ESVTISQPQAGYVYVSLYGASAFSGVRVTARY
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcttggtctggccgtcagcgtcgtgagttgtttcagctacgccttgccgtgggcgtcc
atgctcgaatcggtgcaggcgcgtgtcgccgcgccgacggcgcaagcgccgtcgagcgcg
gattcgcgcagcctggtcgctgccgtgaattcgcaagcaccgatggcgccatcgcgcgcc
acggccatcgccggcctgccgcgacaaccggccaccgaacgccaattgttcggcgaacat
cggcaggatcgcgcgcgcgcaccgtcgcgccgcgcgccgcagcaaccgtccctggtcgat
cgcgacgacagcgcctacgacggcgcgcaatcgcgccgcgatctgttgcgccgaccgtcg
tttgcgcacacctcggcgcgggcgaaagcagcggcctgcgaccccaacgccttcggcgcg
ctcagcggcaccgcgctggtcggcgcggtcaaggccgccagcaccgattgcatcaaccag
ttgttcaacgtcagcgggcctaatgcttacgccacgttccgcgaagcgcagatggtcagc
gtcgccgatgctttcgccacctccgcgcgcgcctacgacggcaccaacgccgacagcacc
ctgcaactggtgctgttcctgcgcgccggttactacgtgcagtactacgacagcagcgtc
ggcgcctatggcgcgccgctgcgcaacgcgatccgttcggcgctcgatgcattcgccggc
aacgcccgcttcggcctggtcaacgacgtgcatggcgaagtgctggccgagttcgtcact
ttgatcgacagctcgggcgagaacgcgcgttatctgtccgtggtcaagcgtctgctcgac
ggctacaacgccagctacaacgcgttctactggatgaaggtggcggtcaacaacgcctac
acgatcaccttccgcggccaccaggacgcggcgttccgcgccttggtgcagaccgacagt
tccatcgtcgagaccttgtacgggttcgccgaccgcaacttcggcctgctcggcggcgac
aacgcctacctggtcgccaacgccggtcgcgagctcggtcgcttcctgcaatacgacggc
gccttgaagacgctgacgcgagcgcgggtgaaagcgctgatcgatcgctcggcggtgacc
ggcccgaccgcgcggctgtgggtcggcgtcggcgaaatggtcgactactacgatcaagcc
aattgcgcctactacggcctgtgcggtttcgtcgcccgggtcgaagcggcggccttgccg
atccgccacacctgcagtccgaccctgcggctgcgcgcgcaatcgatgagcgcggcggag
ctggcctcgacctgcgccaccgtggccgggcaggaaacctatttccacaatgcgctcgcc
accggcggcgcgccggtcaatggcgacggcaacgccagcctggaaatgaccgtgttcgac
agcagcgacgactacggcatctacgccggcgcgatctacggcatcgacaccaacaacggc
ggcatgtacctggaaggcgatccgtcgctgcccggcaaccaggcgcgtttcatcgcctat
gaagccgagtggctgcgtccgcagaccttcgagatctggaacctcacccacgagtacgtc
cactacctcgacggccgcttcaacatgtggggcgatttcgaggacgcgatcgcgcagaag
acggtgtggtggatcgaaggtttcgccgagtatctgtcgtacagctaccgcggcgtggtc
aacgaaggcgcgcgggacgaagccgcgcgcgcgacctatacgctcagcaaggtctatcag
aacgattacaacagcggccagaccctggtgtatcgctggggctatctggcggtgcgcttc
atgttcgagcagcgccacgatcaggtgaacgcgatcctgggctacttccgccccggcaac
tacaccggctatgccacttacatgggcagcctgggcagcagcaacgacgcggcgttccgc
gcctggttgccgtgcgtggcgcagcccgattcgccgaattgcggcaccacgccgaaccag
ccgccggtcgcgggcttcggttttgcgatcagcggcctgacggtgaacttcagcgacagc
tccagcgacgccgacggccgcatcgtttcgcgcaactggaccttcggcgacggcagcacg
tccaccgccaccaacccgagcaagacctacgccaacgccggcagctacaccgtgcagttg
accgtcaccgacgatcgcggcgccagccacagcctcagcaagaccgtcgcggtcagcgcg
ccgagcctacccgaatgcgtgggcaacgatgtgcgggtgctcggcaagaactgcgcgcgc
agcaatgtcgcggcgagcgcgggcaactacgcttacttctatctgtacctgccggccggg
accagtcagctgagtttcgccagcagcggcggcagcggcaatgccgacatgtacgcgagc
acgcgcaactgggcgacgcgtgagtcgtaccagtaccgttcgaccaatgccggcaatggc
gagtcggtgacgatctcgcagccgcaggcggggtatgtgtacgtgagcttgtatggcgcg
agtgcgttcagcggcgtgcgggtgacggcgcggtactga
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