Lucilia cuprina (Australian sheep blowfly): 111686523
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Entry
111686523 CDS
T06013
Name
(RefSeq) dosage compensation regulator
KO
K13184
ATP-dependent RNA helicase A [EC:
5.6.2.6
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcq03041
]
111686523
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111686523
Spliceosome [BR:
lcq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111686523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
nSTAND3
Dicer_dimer
HA2_C
AAA_19
AAA_14
DND1_DSRM
AAA_22
ATPase_2
ATPase
PhoH
Motif
Other DBs
NCBI-GeneID:
111686523
NCBI-ProteinID:
XP_023304649
EnsemblRapid:
LOC111686523
LinkDB
All DBs
Position
5:35330174..35336013
Genome browser
AA seq
1250 aa
AA seq
DB search
MTDIKSYFHEWCAKTKVDPKYESRPTGPKHRQRFLCEIRIPQYPYVAVGNSTNKKDAERN
AARDFINFLVRTGKIQPSDVPADAGIAAVPATNDGPGGSGESFNNSDNQQRRVFDGNAGP
QDLGQAYRPMDRGGDNREHFNFIDRAQEQLDMKEAESIDVNAAIHGNWTIENAKAKLHQF
MQMNKISADYKYSPVGPDHARSFMAEMHIFVRDLKRTITARETGSNKQSASKSCALSLVR
QLYHLGVIEAYTGTLKQKKDNEELAPYEVNVAPELVQKIEEVVRELDLPIVDMNNIKPDP
ETDVVSLQVNTGKDSNRLRMDNQQLVASIIPWAPPQPNWNAWNACNIDEGYLATASLDDL
CNDLETSSKEMRLNNPEYQKFLDFREKLPIAAMRAEIMEAINENPVVIIRGNTGCGKTTQ
IAQYILEDYISSGQGAYCNIYVTQPRRISAISVAERVANERCENLGESVGYSVRFESVMP
RPYGAILFCTVGVLLRKLEAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVHTYPDIRII
LMSATIDTTLFSEYFGRCPVMEVPGRAYPVQQFFLEDCLEMTKFVPTPESRKKNKDKDDE
ENAVIKENGEDISEQNLNKVIDSSYSQQTKNAMAILSESECSFELIESLLLHIKSKDIPG
AILIFLPGWNLIFALMKFLQNSQFGGPQYRILPCHSQIPREDQRKVFEPVPNGVTKIILS
TNIAETSITIDDIVFVIDLCKARMKMFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGF
CFTLCSKARFQALESHLTPEMFRTPLHEMALTIKLLRLGSIHQFLSKALEPPPLDAVIEA
EVLLRDMRCLDNNDELTPLGRILARLPIEPRLGKMVVLSTVFGCADIAASMASYSSTFSE
IFALDLGQRRLQNHQKSLGGSKCSDHVAMIVATQMWENARHKGEDEEIRFCEWKGLQLST
MRVMAEAKSQLLDLLQQAGFPEESMISGRIDANSDDPVLDMATALLCLGLYPNVCYHKEK
RKVLTTESKAALIHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQMTMVAPLHLLLFG
CRKVDLVKGNMVRLDNWLNFKMDPYLASMIAALKPALEDLVSTACDEPSEIMQLNETQSK
LVDVVKDLCTLTAGDYQIQREKGVMPYQSRGSGGSGIPNKRGRFDGGSRGGFGGSGSRGG
FGGGYGGGGFGGGYGGGNRFGGGGSSGFGGRGGGTSNWGRYGGGGGNRRF
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgacggatataaaatcgtattttcatgagtggtgtgcaaaaaccaaagttgatccgaaa
tatgaaagtcggcctaccggtcccaaacatcgtcaacgatttttatgtgagatacgtatc
ccacaatatccatatgtggccgttggcaattcgaccaataaaaaagatgccgaacgtaat
gccgctagggattttataaatttcctcgtacgtactggtaagattcaaccaagcgatgta
cccgccgatgctggcattgcagcggtgcctgcaactaatgatggtcctggtggcagtggt
gaaagctttaacaattccgataaccaacaaaggcgtgtctttgatggtaatgctggaccg
caagatttgggtcaagcttaccgtcctatggatcgtggtggtgacaatcgtgaacatttc
aatttcatcgatcgtgcccaagaacaattggacatgaaagaggctgagtcaattgatgtt
aatgccgccatacatggcaattggacaatagagaatgcaaaagcaaaactacatcaattt
atgcaaatgaataaaatatctgctgattataagtattctcccgtgggtccagatcatgca
aggagttttatggcagaaatgcatatttttgtgcgtgatttaaagagaactataactgct
cgtgagacgggttctaacaaacagtcggccagtaaatcatgtgccttgtcactggttcgt
caactttatcatttgggtgtaatcgaggcatatactggcactcttaagcaaaagaaagat
aatgaggaattagctccctatgaggtcaatgtagccccagagcttgttcaaaaaatagaa
gaagttgtgcgtgaactggatttacccatcgtagatatgaataatattaaaccagatccc
gagacagatgttgttagtttacaggttaataccggcaaagatagtaatcgtttacgtatg
gataatcaacaactggtagcctctataattccgtgggcgccacctcagccaaattggaat
gcctggaatgcttgtaatattgatgagggttatttggctacagcctctttagatgacttg
tgtaacgatcttgaaactagcagcaaagaaatgcgcttgaacaatcctgaatatcagaaa
ttcttagattttcgtgaaaaattaccgattgctgctatgcgcgctgaaatcatggaagcc
attaatgaaaatcccgttgtaattatacgtggtaatactggttgcggtaaaacaacacaa
atcgctcaatacattctcgaagattatatatcttcgggtcagggggcatattgtaatatt
tacgtgactcaacctcgtcgtatatcggccatatcggtagccgaacgtgtagctaacgaa
cgttgcgaaaatctaggagaatctgtaggttattcggtacgttttgaaagtgttatgcct
cgtccttacggagctattttattctgcactgttggtgttttgttgcgtaagttggaggct
ggtttgcgtggtgtgtctcacattattgttgatgaaattcatgagcgtgatgttaacagt
gatttcctgttggtgattctgcgtgacatggtgcacacttatcccgatatacgcattatt
cttatgtcagctaccattgataccactctgttctcagagtactttggacgttgtcccgta
atggaggtacccggcagagcttatccagtgcaacagtttttccttgaagattgtcttgaa
atgacaaagtttgtacccacacccgaatctcgcaagaaaaacaaagataaggatgatgaa
gagaatgcagtcatcaaggaaaatggtgaagatatttcagaacaaaatcttaacaaagtt
atcgattcatcttattcgcaacaaaccaaaaatgcaatggctattttatcggaatcggaa
tgttcatttgagctgattgagtcattattgcttcacattaaatctaaagatattcccggc
gctattttaattttcttacccggttggaatttaatatttgccttgatgaaattcttgcaa
aattctcaatttggtggaccacaatatcgtattttgccatgtcattcacaaattcctaga
gaagatcaacgtaaagtttttgagccagtaccaaatggcgttaccaaaattatactttct
acaaatattgctgaaacatccattacaatcgatgatattgtattcgtaattgatttgtgc
aaggctcgcatgaaaatgttcacctcccataacaatcttacaagttatgccaccgtttgg
gctagtaagaccaatttggaacaacgtaaaggtcgtgcaggtcgtgtaagacccggcttt
tgttttaccttgtgttctaaggcacgtttccaagctttagaaagtcatttaacacccgag
atgttccgtaccccactacatgaaatggctttgaccataaaacttctacgtttgggatct
atacatcaattcttgtcgaaggctttggagccaccgccattggatgctgtaattgaggct
gaagtgcttttgcgtgatatgcgttgtttggataacaatgatgagctaacgcccttgggt
cgtatattggccaggttgccaattgaaccgcgtctaggaaaaatggtggtgttgagtacc
gtatttggttgtgccgatatagctgccagtatggcctcttattccagtacattttcagag
atctttgctttggacttgggccaaagacgtttacaaaatcatcaaaaatcattaggcggt
agcaaatgttctgatcatgtagccatgattgttgccactcagatgtgggaaaatgctcgc
cataagggagaggatgaagaaatacgtttttgcgaatggaaaggtctacaactgtcaact
atgcgtgttatggctgaagctaagagtcaacttttagatttattacaacaagctggtttc
ccagaagaatcaatgatttctggccgcattgatgccaactcggatgatccggtccttgac
atggccacagctctactatgcctgggtctatatccaaatgtctgctaccataaggaaaaa
cgtaaggtcttaactactgaatcaaaggccgctttaatacacaaaacctcggtgaactgc
agcaatttggcggtgactttcccctacccattctttgttttcggcgaaaagattcgtaca
cgtgctgtgtcatgtaaacaaatgaccatggtggcacctttacatttgctattgttcggt
tgccgcaaagtcgatctcgtaaaaggcaatatggtacgtttggataattggcttaatttc
aaaatggatccatatttagcctcaatgattgctgctcttaaaccagccctagaagacttg
gtatcgactgcctgtgatgaaccctcagaaattatgcagttaaatgaaacacagtcgaaa
ctggtggatgtggttaaggatctttgcaccttaactgctggtgattatcaaatacagcgt
gaaaagggtgttatgccatatcagagtcgcggatctggtggcagtggaataccaaataaa
agaggaagatttgatggtggcagcagaggtggttttggcggcagtggcagccgaggtggt
tttggtggtggttatggcggtggtggttttggaggtggttatggcggtggcaatcgtttc
ggtggtggtggcagcagtggctttggcggccgcggaggtggtactagtaattggggacgt
tatggcggtggtgggggtaatcgccgattttaa
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