Lignipirellula cremea: Pla8534_44580
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Entry
Pla8534_44580 CDS
T06949
Name
(GenBank) WD domain, G-beta repeat
Organism
lcre
Lignipirellula cremea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
PROPPIN
eIF2A
WDR54
Ge1_WD40
Motif
Other DBs
NCBI-ProteinID:
QDU96637
UniProt:
A0A518DXR0
LinkDB
All DBs
Position
complement(5992835..6000124)
Genome browser
AA seq
2429 aa
AA seq
DB search
MTDGNCFAGRNRFELSLAAVSAAWRLSLLLGLLLSFPGGPASVVAQEQRLPGHGAGVNAV
IYSPDGRYLLSGSADQTIKIRNAATGDELRTLRGHTAQVLTLATDPAGRQLVSGSADNTL
RLWDIPQAEPFYSAVASPGPLVQLAIDPLGEKVLVVGEDRLPHLLNLADGALLESLQGHD
AALTGAAFRGDNQQFVTADAAGRLLFWRAFDNAQRGRIDAHRGAVVGVAYHPSNQQLITA
GADGLLKTWQLPLVDPRVLPEAPGPVRCAEVTANGQLLVTAGNGHARVYTVATGALAREL
ATDVGNSLSLALSGDSLLAAAGDEQGRVKFWAINDGADRAQLEAHVGSVLATAFHPDNQR
IATASDDGVIRLWSLPQPRLPLAGHTAAVLSTAVSPNGTYGATASADHSVRLWTPSTGAA
LRTLAGHASPVTSTAFKADSTQFATTDDSGVLRLWNPADGVEQAVWGAHPTAANSAAFHP
AGDRLATAGADGTIKVWRLPAVAPRTLAGHTSPVADVAVSADGAVVLSGGEDKTVRLFNG
ATGAALRTLAGQGEAVSSLALSADATLAASGSVDGVIQLWNAADGADRLQLRGHTGPVLG
LAMSPQGDLLASAGADQSVRLWRLPVAPTMLAGHTAPVSEVVATTSGELVATGSADKGVR
LWNHADGTAAGTGAVHQGAVAALAAGMLPAAGEAKAMEILASGDDQGELQLWDVAGKGSL
GSALAHVGGLTGLTFTPTGDRLISTGADGSLKWWRLPLQSPTTWPATTGEITAVVTAADG
SFALVGSADKSVRLFDLQAEAAPVVLAAGNGPVTSLALRRDKTLAAIGDAEGVVRFVDPA
APPAAADSVPPPALAGHAGPVLGAAFNATGDRLATASADGVVRVWSIPQPSQVYAGDATS
TRMTVSRDGKFSAAAAVVNNRPAVVIRNTTTGQVIQQLFGHDGAVLGLAFSENGLRLATG
SADQTARVWDLADPKFPEIQRVSHGAAVAAVALSPDGQQLFSGGADNAIKQWAVADGAEV
RTLAGHTGALTAMCAVGDLLVSGAADSTARTWKLSTGAAIGTLAQGAAVTSVAASPDAQL
VAVGGAGKTIKLWKAVGGAAAGELTGHAGPIASLTFSAEGGRLVSSSTDGVRLWSTSGLL
EDFLPLAEPAPVGAGFGATAANLPPRLLIGAADNSLRAADSALVQAFAGHDGAVNAIAFS
PDGALLLTAGADKTLRIWPLAAGGQPRSLAGHTDAATAIAIDPTGKTAASASNDKTVRLW
NLADGAQIASYPFDAPVRSLAFSPGGARLAATSDDAQLRVLDLPAGRELQRVTLGAMPLL
SVAFAGEDRIVAGGADKLTYAVPLQVERVVAAAETGVLQLAASADGQRLATLDSTGTMSF
WNANGERLAAPLLVKGLVDAALRPDGLQWAGADATGKVLFGDLTSLPATAPAAPAALPAP
VVIETGSPVHRVAYNGAGSKLAAATTAGGRVYDPTTHGLLETAPTTGPMATIAFGAAGEQ
LLYGEANQGAIRPLNLVRLLAGHTDAATAVAFTGDGALLLSASADKTVRLWRRETGEPVP
LTFAGPTGALHDVAVSIGSADSPAQVVAGGEEGKAFRWVLPAALPAAAATLQPTAVYDHG
GPLRSVALSADAARLVAAGDDKIVRLWDTASGAELERWTSHTAAVQGVAMTPDGGVVVSG
GADNGVQVASVSAIGLRSLAATMATQLAYLPTGELAAACGDGKVRVWDAEEKESVLDAGV
TGPLVGLALLPALAPEGFAQAAALDSQGGIHVWNLKSGEQMLLIKGPAPATPAVADAVTP
RGLTWSADRLRLAAAGFDGKLRVYEATTGMLLETFSPPEKAPFVTASFLPDSRTLLVGGA
AEAGNAAVLHVSALGTIAAHEGAVNSLAFTPDGASLVSGGADQMVRLWNTADGVLKRSFQ
GAEKAITDVAVSADGKSLAAASEDQSLRIWSVAPVAVEPAVPADPADPAVAADPLAVFTG
ESATRSVSFSADGLRLASSADDGVVRVWDLASGKELERFAGHEGAVHAVDFGADSKTLVS
AGEDLTARIWTIAAVRAVAASAGPLRSLGIAAAGAQAATIGSEPEVRLWNLADGALVRSY
PAGESPLTAVAVRADNAQLVASDETDKVFLWNLADAVVTTSFQAPSAVRDLQYSPDNLKI
AALGGDDRIRFLNPADGETLFELESPAPLAACRFTADSRRLATVGSDGAARLWAYASPDP
VRQFNGHGNGVYGVAWSPNREQIASASGDQTIRLWNPLTGQQQLSLTGHQGAVYAVAYSP
DGALLVSCGADKTIRLWDVLGGRQLKSIDVGEAAAYSVQFHPDGKRVVAGGLDKQVHLYD
AFTGQLLSSIPGHEDYIYRVTFNKAGTRVLTCGYGGSVAVWNVANGAKAFSARPCRSASY
VEYSPDGEKAAVASGDGAVYLLEIPAAAR
NT seq
7290 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgggaattgctttgctggccggaaccgttttgaactttcgctcgcagccgtc
tcggctgcatggcggctttctctcctgctgggattgttgctgtcgttccccggaggaccg
gcgtcggtagtcgcccaggaacagcggttgcccggacatggggccggcgtcaatgcggtg
atctactcgcccgacggacgctacctgctaagcggtagcgccgaccagacgatcaaaatc
aggaacgcggcgaccggcgacgagttacgcacgctccgcggccatacggcccaggtgctt
acgctggcgaccgatcccgccggccgtcagctggtttccggctcggccgacaacacgctg
cggctgtgggacatcccccaggcggaacctttctattccgctgtcgccagtccgggaccg
ctggtccaattggcgattgatcccctgggcgaaaaggtgctcgtcgtcggcgaagatcgg
ctcccccatctgttgaacctggcggacggcgccttgctggaatcgctgcaggggcatgac
gctgctttgacgggcgccgctttccgcggcgataaccagcagttcgtcacggccgacgcc
gcggggcggttgctgttctggcgcgcctttgataacgcccaacgcggccggatcgatgca
catcgcggggcggtcgtgggcgtcgcgtaccatcccagcaaccagcaactgatcaccgct
ggcgccgacggcctgctgaaaacctggcagttgccgctggtcgatccccgtgtcctccct
gaagcgccaggcccggtccgctgtgcggaagtcacggccaatgggcaactgctggtcacg
gccggcaatggtcacgcccgggtgtataccgtggcgaccggggcgctggcccgtgaactg
gcgaccgacgtgggcaactctttgagtcttgcgctcagcggcgacagcttgctggcggcg
gcgggcgacgagcagggccgtgtgaagttctgggccatcaacgacggcgccgatcgagcg
cagctggaagcccatgtgggatccgtgctggcgacggcctttcatcccgacaaccagcgg
atcgccacggcgtcggacgatggcgtgattcgcttgtggagtctgccgcagccccggtta
ccgttggcgggccacacggcggccgtcctgtcgaccgcggtcagccccaacggtacttat
ggcgccacggcctcggccgatcatagcgtgcggttatggacgccctccaccggcgcggcg
ctgcgcaccctggcgggacatgcctcgccggtgacatcgaccgccttcaaagccgacagc
acgcagttcgccacgaccgacgacagcggcgtgctgcgcctctggaacccggccgacggc
gtggagcaggcggtctggggagcccatcccaccgcggcgaacagcgcggcgtttcatccg
gccggtgatcgtttggcgacggcgggggccgacggtacgatcaaagtttggcgactgccg
gcggtcgctccgcgcaccctggcgggccatacgtcgccggtcgccgatgtggccgtatcg
gccgacggtgcggtcgtccttagcggcggcgaagacaaaactgtgcggctgttcaacgga
gccaccggcgccgccctgcgtacgctggcgggccagggagaagccgtttcctcgctcgct
ctgtctgccgatgcgacgcttgcggccagtggttcggtcgacggggtgatccagttgtgg
aacgcggccgacggcgccgaccggctgcagctgcggggccacacgggtccggtgctgggg
ctggcgatgagcccgcaaggcgacctgctggcctccgccggcgcggaccagtcggtgcgg
ctgtggcgattgcccgtcgcgcccacgatgctggcgggacatacggccccggtgtcagaa
gttgtcgccacgacctcaggcgagctggtcgccactggctccgctgacaagggcgtaagg
ttatggaaccacgccgacgggacggctgccggaaccggcgccgtgcatcagggcgcggtc
gccgcgttggccgcgggtatgctgccggctgcgggagaagccaaggcgatggagatactc
gccagcggcgatgatcagggcgaactgcagctgtgggatgtcgccggcaagggatcgctc
ggctcggccctcgcccatgtcggcggtctgaccgggctcacgtttactccgaccggggat
cggctcatttcgaccggggcggacggcagcctcaagtggtggcgtctgccgctgcagtcg
ccgacgacctggcccgcgacgacgggagaaatcacggccgtcgtcaccgcggctgatggt
tcgtttgctcttgttggatcggccgacaaatcagtccgcctgtttgacctgcaggccgag
gcggcgccggttgttctggcggccgggaatgggcccgtcacgtcgctcgccctgcgtcgc
gacaagacactggccgcgattggcgacgccgaaggagtggtccgattcgtggatccggcc
gctccgcctgccgccgcggattccgtcccgccgcctgccctggcagggcatgcgggccct
gtactgggtgcggcgtttaatgcgacaggcgaccgcctggcgaccgccagtgcggatggc
gtggtgcgtgtctggtcaatcccgcaaccatcgcaagtctacgcaggcgatgcaacatcg
acccggatgacggtcagccgcgacggcaaattctccgcggctgcagcggtcgtgaataat
cgaccggccgtcgtgattcgcaacacgacgaccggccaggtgatccagcaactgttcggc
catgacggcgccgtactggggctcgcctttagtgagaacggcttgcgactggcgaccggt
tcggccgaccagaccgcccgggtgtgggatctggcggacccgaagtttcccgagatccag
agggtgagccacggcgcggccgtcgccgcagtcgcgctcagccccgatggacagcagctg
ttcagcgggggcgccgacaacgcaatcaaacaatgggccgtcgccgacggggccgaagtc
cgcacgctggccggtcacaccggcgccctgacggcgatgtgcgcggtgggcgacctgctg
gtttcaggagcggccgacagcacggcccgcacctggaagctgtcaaccggcgccgccatt
ggtacgctcgcgcaaggagccgcggtgacatcggtcgccgcttcgcccgacgcccagctg
gtggccgttggcggagcggggaagacgatcaaactctggaaagcggtcggcggcgccgcc
gccggcgagttgacagggcatgcgggtccgatcgcctcgctcacgttcagcgcggagggc
ggtcggctcgtcagcagttcgaccgacggcgtgcggttgtggagtacgtccggcctgctc
gaagattttctgccgctggcggaaccggctcccgtaggagcagggttcggcgcgacggcg
gcgaacctaccgccgcggctgctaattggcgccgcggataactcgctgcgtgcggctgac
tcggctttggtgcaggcgtttgccgggcacgacggcgccgtgaacgcgattgccttttcg
cccgacggcgcgttgctgttgacggccggcgccgacaaaaccttacgcatctggccgctg
gcagccggcggtcaaccgcgttccctggcgggccatacagacgccgcgacggcgatcgcc
atcgacccgaccgggaagacggcggcctcggccagcaacgataaaacggtgcggttgtgg
aacctggccgacggagcccagatcgccagttatccgttcgacgcccccgtccgcagtctc
gcattcagtcccggaggcgcacgcctggccgcgacgagcgacgacgcccaattgcgcgtg
ctggatctgcctgccggtcgcgagctgcagcgggtcacgctgggagccatgccgctgctg
tcggttgcgttcgctggagaagatcgcatcgtcgcaggcggcgccgacaagttgacgtat
gcggtacccctgcaggtggagcgcgtcgtggcggccgcggaaacgggcgtcctgcagctg
gccgccagcgcggacggccagcgtctggcgacgctcgacagcaccgggacgatgtcgttc
tggaacgcgaatggcgaacgtctcgcggcgccgctgctcgtgaaagggctggtggatgcg
gctcttcgccccgacggtctgcagtgggccggggccgatgcaacggggaaagtgctgttt
ggcgatctgaccagcctgccggcgacggcgcctgccgcaccggcggcgttgccagcgccg
gtcgtgatcgaaacggggtcgcccgttcatcgggtggcttataacggggccggcagcaaa
ctggcggcggcgaccaccgctggcggacgcgtttacgatccgaccacgcacgggttgctg
gaaacggctcccactaccgggccgatggcgacgattgcctttggcgcggcgggagagcag
ctgctctatggcgaagcgaaccagggcgccattcgtcccttgaacctggtccgtctgctg
gccggacatacggacgcagcgaccgcggtcgccttcactggcgatggcgccttgttgctc
tctgccagcgccgacaagacggtgcgactatggcgaagggagacgggcgagcctgtcccg
ctgacgttcgccggaccgaccggggcgctgcacgacgtggcggtgagcatcggcagcgcc
gactcgccggcccaggttgtcgccggcggggaagaaggaaaggcattccgctgggtgctg
ccggccgcattgccggcggctgcggccaccctgcagccgacggccgtttatgatcacggc
gggccgctgcgcagcgtcgccttgagcgcggatgcagcacgcctggtcgcggctggcgat
gacaagatcgtgcgtctgtgggacacggccagcggtgcggagctggagcgatggacgtcc
cacacggctgccgtgcagggagtcgcgatgacgcccgacggcggcgtggtcgtctccggc
ggagccgataacggcgtgcaggtcgccagcgtttccgccattgggttgcgatctctcgct
gcgacgatggctacgcaattggcgtatctaccaaccggcgagctggctgccgcctgtggc
gacggcaaggttcgtgtgtgggacgccgaggaaaaagaatccgtgctcgatgcaggtgtg
acgggtccgctcgtcggactggcgttgctgccggccctcgcgccggaagggttcgcccag
gcggccgcgctcgatagccagggcgggattcatgtctggaacctgaagtcgggcgaacag
atgctgctgatcaagggccccgctccggcgactccagcggtggcggacgcggtgacgccc
cgcggtctgacctggtcggccgatcgattgcggctggcggcggcgggattcgacggcaag
ctgagagtgtacgaagcaacgaccggcatgctgctggagacgttctcgcccccggagaaa
gcgccgtttgtgacagcgtcgttcctgcccgacagtcgcacgctgctggtcggcggcgcg
gccgaagccgggaacgcggcggtgctgcatgtctcggccctgggcacaatcgccgcgcat
gaaggggctgtgaacagtctggcgttcacgcccgacggcgccagcctggtcagcggcggc
gccgaccagatggtgcgtctgtggaacacggccgacggcgttctgaaacgctccttccag
ggcgccgagaaggcgatcaccgatgtcgccgtgtccgccgacggcaagtcgctggccgct
gccagcgaagaccagtcgctgcggatctggagcgtggcgccggtcgcggtcgaaccggcc
gtcccggcggacccggcggacccggcggttgcggccgatccgctggctgtgtttacgggc
gagagtgcgacgcgaagcgtgagtttcagcgccgacgggctgcgtctggcttccagcgcc
gatgacggcgtggtccgggtgtgggatctggccagcgggaaagagctggaacgtttcgcc
ggtcatgaaggcgccgtgcatgcggtcgatttcggggccgacagcaagacgcttgtttct
gcgggcgaggatttgacggctcgcatctggacgatcgccgcggtgcgagctgtggccgct
tctgccgggccgctgcgttctctggggatcgccgccgccggcgcccaggcggcgacgatc
ggctcggagcccgaggtgcggttgtggaatctggccgatggcgcgctggttcgatcgtat
ccagccggcgaatcgcctttgacggctgtggcggtgcgggccgataacgcccagctggtt
gccagcgacgagaccgataaggtctttctgtggaacctggccgacgccgtggtgacgacc
tctttccaggcgccgtccgccgtgcgggatttgcaatacagtcccgacaatctcaaaatc
gccgcgctgggcggcgacgaccgcatccggtttctcaatccggccgatggggaaacgttg
ttcgaactggaatcgcccgccccgctggccgcctgtcggtttacggccgatagccgtcgt
ctggcgaccgtcggttccgatggggcggcccgtttgtgggcgtatgcttcgcccgatccg
gtccgacaattcaacgggcatggaaacggcgtgtatggcgttgcctggagccccaaccgg
gagcagatcgcatctgcctcgggcgatcaaacgatccggctatggaaccctttgacgggc
cagcagcagttgtcgctgaccggtcaccagggcgccgtgtatgcggttgcttacagtccc
gacggagccttgttggtttcgtgcggggccgacaaaacgattcgcctgtgggatgtgctg
ggcggacggcagctgaaatcgatcgatgtgggcgaagcggccgcgtacagcgtacagttt
catcctgacggaaagcgggtggtcgccggcgggctggacaagcaggtgcatttgtacgac
gcctttacgggacaactgctgtcgagcatcccaggccatgaggattacatttatcgtgtg
accttcaacaaggccgggacgcgtgtgctcacctgcggttacggcggctcggtcgccgtg
tggaatgtggccaacggcgccaaggctttctcggcccgtccttgccgttctgccagctac
gtcgaatattctcccgacggcgagaaggcggcggtggcgtccggcgatggagccgtttac
ttgctggagattccggccgcggcccgataa
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