Leptosomus discolor (cuckoo roller): 104350177 Help Entry 104350177         CDS       T08399                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism ldi  Leptosomus discolor (cuckoo roller) Pathway ldi04010   MAPK signaling pathway ldi04120   Ubiquitin mediated proteolysis ldi04140   Autophagy - animal ldi04144   Endocytosis ldi04620   Toll-like receptor signaling pathway ldi04621   NOD-like receptor signaling pathway ldi04622   RIG-I-like receptor signaling pathway ldi05132   Salmonella infection ldi05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ldi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     104350177 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     104350177 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     104350177 (TRAF6)    04140 Autophagy - animal     104350177 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     104350177 (TRAF6)    04621 NOD-like receptor signaling pathway     104350177 (TRAF6)    04622 RIG-I-like receptor signaling pathway     104350177 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     104350177 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     104350177 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ldi04131]     104350177 (TRAF6)    04121 Ubiquitin system [BR:ldi04121]     104350177 (TRAF6) Enzymes [BR:ldi01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104350177 (TRAF6) Membrane trafficking [BR:ldi04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     104350177 (TRAF6) Ubiquitin system [BR:ldi04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     104350177 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Sina_ZnF Med21 SlyX PspA_IM30 TRAF3_RING zf-RING_11 CENP-F_leu_zip U-box HAP1_N Spc29 UPF0242 CEP104_ZnF DUF2730 ATG16 DUF1664 DUF16 DM HMMR_N ADIP Motif Other DBs NCBI-GeneID:  104350177 NCBI-ProteinID:  XP_009954235 LinkDB All DBs Position Unknown AA seq 523 aa AA seqDB search MASACSIGAKEDSMSVSSGTGNSPSSFTEETQGYDVEFDPPLESKYECPICLMALREAVQ TPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNKGCSMK MELRHLEDHQMQCDFSTVECPQCQGAFQKNHLKEHMTQECPRRQVCCPNCATSMAYEDKE LHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPVPCFYSAFGCPEKMQRNELARHM QEFTQVHMRMMAQSFQNISVTATNPVPFINGLPFEPALFSHVSRATYDCNPEVENFKETI QQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNLEGKITEMEAQQCNGIYIWKIEN FSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVHTMQGEYD SHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAFQRPTIHRNPKGFGYVTFMHL QTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARSTDGAM NT seq 1572 nt NT seq  +upstreamnt  +downstreamnt atggccagtgcctgcagcattggagcgaaggaagacagcatgagcgtcagcagcgggacg gggaactctccgagttctttcacagaggaaacgcaaggatacgatgtggagtttgatccg cccttggagagtaaatacgaatgtccgatctgcctgatggctcttcgggaagcggtgcag acaccgtgtggacaccgcttctgcaaaggctgcattgtcaaatcaataagagatgcaggt cacaaatgtccagtagacaacgaaattctgcttgaaaatcaactttttcctgacaacttt gctaaacgggaaatcctttcgttgatggttaagtgtcccaacaagggctgcagtatgaag atggagctgaggcatttggaggaccaccagatgcagtgtgatttttccactgtggagtgc ccacagtgccaaggagccttccagaagaaccatctgaaagagcacatgacacaggagtgt ccaaggcgtcaagtctgttgtccaaactgtgccacatctatggcctatgaagataaagag cttcatgaccaaacctgcccactcgccaatgtgttttgtgaatattgcaacaccgtgctc atcagagagcagatgcctaaccactatgacaatgattgtcctactgccccagtgccatgt ttttacagtgcctttgggtgtcccgaaaagatgcaaaggaatgaactggcacgacatatg caggagttcactcaggttcatatgagaatgatggctcagagttttcagaatatcagtgtt actgctacaaatcctgtccccttcatcaatggcctaccctttgagcctgccctcttctca cacgtgtcacgtgccacatatgattgtaacccagaagttgaaaacttcaaagaaactatt cagcagctggaaggtcgtctggtgagacaagatcaccaaatcagagagctcattgcgaaa atggagacacagaacactcacatggcggaactcaaacgtactatccgaaatctggaggga aagatcaccgaaatggaggcacagcagtgcaatggtatttatatctggaagattgagaac ttcagtggactgcagaaagcccaggaagaagagagacctgttgtgatgcacagtcctggc ttctacactggaaagcctggctacaagctgtgcttgcgccttcatatccagttaccaaac gcccagcgttgtgctaattttatttctctgtttgtgcacactatgcaaggagagtatgac agccacctgccctggcctttccaaggcactatccgactctctattttggatcagtcagaa ggccctgaaaggcagaatcatgaagaagtaatggaagccaagccagagttgctggccttc cagagaccaacaattcaccgcaatccaaaagggtttggttatgtgactttcatgcacctg cagaccttgaaacagagaaccttcgtaaaggatgacaccctcctggtgcgctgtgaagtt ttaacgcgtctggatttaaacagtctccgcagagaaggatttcaagctcgcagtactgat ggagctatgtag

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