Lentzea guizhouensis: BBK82_20565
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Entry
BBK82_20565 CDS
T04448
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
led
Lentzea guizhouensis
Pathway
led03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
led00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBK82_20565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
led03021
]
BBK82_20565
03019 Messenger RNA biogenesis [BR:
led03019
]
BBK82_20565
Transcription machinery [BR:
led03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BBK82_20565
Messenger RNA biogenesis [BR:
led03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBK82_20565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
NACHT
ASFV_J13L
Motif
Other DBs
NCBI-ProteinID:
ANZ38098
UniProt:
A0A1B2HK40
LinkDB
All DBs
Position
4122656..4124668
Genome browser
AA seq
670 aa
AA seq
DB search
MSNTDLLSSDVAAASGSGAEETALSTPSNGTTPRRRAGLSGMVLAELRELAGQLGITGTA
GLRKGDLIAAIKEKQGSGAPAAKAEKPARAPKQAAEKPAPVAEQPVAEKPAEKPVQQQLE
VAAEKPAAAAVDAGAEDGGRASEEGGRRGNRRRRSGRGGGSAEAGDGQQQPQEQRQEQRQ
ERAERSDRGERSERSDRGERSERSDRGERSERGERSDRGERSDRGERGDRGDRGGRDRNR
DRGERGDRQGGSQQGDDDGDGRRGRFRDRRRRGGRGEGTERPDRETEVRDDDVLLPVAGI
LDVLENYAFVRTSGYLAGSNDVYVSLSLVRKYGLRRGDAITGAVRQPRDGEQQRQKFNPL
VRVDKINGLDPDEARNRPDFTKLTPLYPNERLRLETEPHILTTRVIDLVMPIGKGQRALV
VSPPKAGKTSVLQSIANAITKNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPP
SDHTTISELAIERAKRLVEMGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALYP
PKRFLGAARNIEGGGSLTVIATALVETGSAGDSVIFEEFKGTGNAELKLDRKIADKRTFP
AVDVDSSGTRKEELLLSPDEMAVTHKLRRVLHALDGQQAIDLLLDRLRKSRTNIEFLMQV
AKTTPGAEQD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacaccgatttgctgagcagcgatgtcgcagctgcttctggttctggagccgag
gagaccgctctgtccaccccttcgaacggcacgacgccgcgccgccgcgcgggtctgtcc
ggcatggtcctcgctgagctccgtgagctcgccggccagctgggcatcaccggaaccgca
ggcctgcgcaagggcgacctgatcgcggccatcaaggagaagcagggctccggagccccc
gctgccaaagccgagaagccggcgcgggccccgaagcaggccgccgagaagccggctccc
gtcgcggagcagccggtggccgagaagcccgcagaaaagcctgttcagcagcagctcgag
gtagccgcggagaagcctgccgccgctgccgtcgacgccggagccgaggacgggggtcgt
gcctccgaggagggcggccgccgtggcaaccgccgccgccgttccggccgtggtgggggc
agcgccgaggcgggcgacggccagcagcagccgcaggaacagcgtcaggagcagcgccag
gagcgtgccgagcggtccgaccgcggggagcgttccgagcggtctgaccgtggcgagcgc
tctgagcgttccgaccgtggtgagcgctctgagcgtggcgagcgttccgaccgtggcgag
cgttctgaccgtggtgagcgcggcgaccgtggtgaccggggcggccgtgaccgcaaccgc
gaccgtggtgagcgcggcgaccgccagggcgggagccagcagggtgacgacgacggcgat
ggccgtcgtggccgcttccgcgaccgccgccgtcgtggtggccgtggcgagggcaccgag
cgtccggaccgcgagaccgaggtccgcgacgacgacgtcctgctcccggtcgcgggcatc
ctggacgtgctggagaactacgcgttcgtccgcacgtcgggctacctggccggctcgaac
gacgtctacgtctcgttgtcgctggtccgcaagtacggcctgcgccgcggtgacgccatc
accggcgccgtccgccagccgcgcgacggcgagcagcagcgccagaagttcaacccgctg
gtccgcgtcgacaagatcaacggcctggacccggacgaggcgcgcaaccgcccggacttc
acgaagctgacgccgctctacccgaacgagcgtctgcgcctggagaccgagccgcacatc
ctcaccacccgcgtcatcgacctggtgatgccgatcggcaagggccagcgcgccctggtc
gtgtcacccccgaaggccggcaagacctcggtgctccagtcgatcgccaacgcgatcacg
aagaacaaccccgagtgccacctgatggtcgtcctcgtcgacgagcgtccggaagaggtc
accgacatgcagcgctcggtgaagggcgaggtcatcgcctcgaccttcgaccgcccgccg
tcggaccacaccaccatctccgagctcgccatcgagcgcgcgaagcgactggtggagatg
ggccacgacgtggtcgtgctgctcgactcgatcacccgcctgggccgcgcctacaacctg
gcagccccggcctccggccgcatcctgtccggtggtgtcgactcgacggccctctacccg
ccgaagcgcttcctcggcgcggcccgcaacatcgagggcggcggctcgctgaccgtcatc
gccacggcgctggtcgagaccggctccgccggcgactcggtcatcttcgaggagttcaag
ggcaccggcaacgccgagctcaagctcgaccgcaagatcgccgacaagcgcaccttcccg
gccgtcgacgtcgacagctcgggcacgcgcaaggaagagctcctgctctccccggacgag
atggcggtcacgcacaagctccgccgcgtgctccacgccctggacggccagcaggccatc
gacctgctgctcgaccggctccgcaagtcgcgcaccaacatcgagttcctgatgcaggtc
gcgaagacgacgccgggcgccgagcaggactga
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