Lentzea guizhouensis: BBK82_36775
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Entry
BBK82_36775 CDS
T04448
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
led
Lentzea guizhouensis
Pathway
led03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
led00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BBK82_36775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
led03400
]
BBK82_36775
Enzymes [BR:
led01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BBK82_36775
DNA repair and recombination proteins [BR:
led03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BBK82_36775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
ANZ40726
UniProt:
A0A1B2HSK8
LinkDB
All DBs
Position
complement(7657879..7659321)
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AA seq
480 aa
AA seq
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MAGLDEYRRKRDPGRTPEPVPDAAALPRGDDDTFVIQEHHASSLHWDVRLERGGVLVSWA
VPKGLPPTTDVVRLAVHTEDHPLEYAEFSGEIPKGEYGGGSMFIWDHGRYETVKWSDREV
DVVLRGGRVEGQFVFFRSGEDGKNWMVKRRHANARPDWQVLPEQVKPMLAVPGPLPADDD
DQWAYEFKWDGVRAILRVEGGRVQAWSRLGNDITVAYPELQAVGEQLGSTEALLDGEIVA
LRDGRPSFSALQNRMHVSKSDAARRAARQYPITLLLFDLLHLDGTSLLQLPFVKRRELLR
GLELKGPTWLTPPSYDTDGAAVLAASREQGLEGVVAKRVDSVYQPGMRSPVWRKITDLMA
QEVVIGGWRMGEGKRAGVIGALLLGIPRGDGLAFAGSVGTGFNDAELAVLTPRLKALARR
SSPFVTEMPRERSRGAKWVEPELVAEVVFRQWTPDGRMRFPAWRGLRPDKSPEEVRRVEQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctcgacgagtaccggcgcaagcgggatccgggcaggacgccggagcccgtg
cctgatgccgccgcgcttccgcggggcgacgatgacacgttcgtgattcaggagcaccac
gcgtcgagcctgcattgggatgtgcggttggagcggggtggtgtgctggtgtcgtgggcg
gtgccgaaggggttgccgccgacgacggatgtggtgcggctggcggtgcacaccgaggat
cacccgttggagtacgcggagttctcgggtgagattccgaagggtgagtacggcggcggg
tcgatgttcatctgggaccacggccgttatgagacggtgaagtggtctgaccgtgaggtc
gacgtggtcttgcgcgggggtcgggtcgaggggcagttcgtgttcttccgttcgggtgag
gacgggaagaactggatggtgaagcgccggcatgcgaatgcgcggccggactggcaggtg
cttcccgagcaggtgaagccgatgctggcggtgccgggtcccctgccggccgatgatgac
gaccagtgggcgtatgagttcaagtgggatggtgtccgggcgatcctgcgggtcgagggt
ggccgggtgcaggcgtggtcgcggttgggcaacgacatcacggtggcgtatccggagctg
caggcggtgggtgagcagctggggtcgacggaggcgttgctcgacggtgagatcgtggcg
ttgcgggacgggcggccgagtttcagcgcgttgcagaaccggatgcacgtgagcaagtcg
gatgcggcgcggcgggcggctcgtcagtacccgatcacgttgttgctgttcgacctgttg
caccttgatggcacgtccttgttgcagcttcctttcgtgaagcgccgggagttgctccgg
gggttggagctgaagggcccgacgtggctcactcccccgtcgtatgacaccgatggtgcc
gcggtgctggcggcgagtcgtgagcaggggcttgagggtgtggtggcgaagcgggtggac
tcggtgtaccagccggggatgcggtcgccggtgtggcgcaagatcaccgatttgatggcg
caggaggtggtgatcgggggctggcggatgggtgaaggcaagcgtgcgggggtgatcggc
gcgttgttgctgggtattccgcggggtgacgggctggcgttcgcggggtcggtgggcacg
gggttcaacgatgcggagctggcggtgctgacgccgcggttgaaggcgttggcgcgcagg
tcgtcgccgttcgtgacggagatgccgcgggagcggtcgaggggcgcgaagtgggtcgag
ccggagctggtggccgaggtggtgttccggcagtggacgccggacgggcggatgcggttt
ccggcgtggcgtggtttgcggccggacaagtcgcctgaggaggtgcgccgggttgagcag
tga
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