Lelliottia jeotgali: LJPFL01_0317
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Entry
LJPFL01_0317 CDS
T05035
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
lef
Lelliottia jeotgali
Pathway
lef02020
Two-component system
lef02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LJPFL01_0317
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LJPFL01_0317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lef03021
]
LJPFL01_0317
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lef02035
]
LJPFL01_0317
Transcription machinery [BR:
lef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LJPFL01_0317
Bacterial motility proteins [BR:
lef02035
]
Flagellar system
Flagellar assembly proteins
Stator
LJPFL01_0317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_38
HrpB7
VD10_N
GerE
HNH_repeat
UPF0122
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
ASV53680
LinkDB
All DBs
Position
335872..336567
Genome browser
AA seq
231 aa
AA seq
DB search
MMDFIADEALSPADEAKYVNAYLPLVHRVVKQLSWQTSSVMDKEDMEQIALMGLLTSLRR
YGHPDEQFGAYAAQRVRGAVLDELRELDWRPRRLRQKSHKINDAIREVTRKLGRTPTFDD
LSQQLSITAEEYHEYLLLDCARSLESLDELLGEDALHGSLNTRSLEDEMVISGTLKAALA
SLDEREQLILTLYYQQEMSLKEIALVLDLTEARVCQLNKKIAQKIQCFFQK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttattgctgatgaagcgctgagcccggctgacgaagcgaaatacgttaac
gcgtatttgccgttagtgcatcgggtggtgaaacagctctcctggcaaaccagcagcgtg
atggataaagaagacatggagcagatcgccctgatgggtctgctgacgtcgctgcgtcgt
tatggtcaccccgatgagcagtttggggcctatgccgcacagcgcgttcgtggcgcggtg
ttggatgagctgcgcgagctggactggcgtccgcgtcggctgcgccagaagagccataag
atcaacgatgctatccgtgaggttacgcgcaagcttggccgcacgccgacgtttgacgat
cttagccagcaactgtccatcactgccgaagagtaccacgagtatttactgctggattgc
gccaggtcgctggaaagtctcgatgaattattaggtgaggatgcgctgcacggcagtctc
aatacccgctcgctggaggacgaaatggtcatcagcggcaccctaaaggctgcgctggcg
agtcttgatgagcgtgaacaactgatccttacgctctattaccagcaggaaatgagcctg
aaagaaatcgcgctggttctcgatctgaccgaggcgcgcgtctgccagcttaataaaaag
atcgctcaaaagatccagtgttttttccagaagtga
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