Lelliottia jeotgali: LJPFL01_3328
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Entry
LJPFL01_3328 CDS
T05035
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lef
Lelliottia jeotgali
Pathway
lef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LJPFL01_3328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lef03400
]
LJPFL01_3328
Enzymes [BR:
lef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LJPFL01_3328
DNA repair and recombination proteins [BR:
lef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LJPFL01_3328
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ASV56691
LinkDB
All DBs
Position
complement(3571072..3574446)
Genome browser
AA seq
1124 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVEREHPADPFEPEMVLVQSTGMAQWLQMSLAQKFGIAANI
EFPLPASFIWEMFVRVLPEIPKKSEFNKQSMSWKLMSLLPDMLASDEFAMLRHYLSDDTD
KRKLFQLASRTADLYDQYLVYRPDWLTRWEAGALVDGLPEAQIWQAPLWKALVEHTAKLG
QPQWHRANLYERFISTLETVSEPPAGLPSRVFICGISALPPVYLNALKALGKHVDIHILF
TNPCRHYWGDIQDPKWLARLVARQRRRIFEDRAIPLFKDSDNAAQLFDEEGIQDLPNPLL
ASWGKLGRDYIHMLSDISSSGEGDVDAFAEITPDSLLHNVQLDILDLDNRAIAGITAEEF
ARSDKKRRLDPEDRSVTVHVCHSPQREVEVLHDKLLAMLQDCPELTPRDIVVMVADIDSY
SPFIQAVFGSATGDRYLPYAVSDRRARQSHPALQAFLSLLALPDSRFISEDVLALLDVPV
LAARFNIDEEGLRYLRQWVNESGVRWGIDDDNVQEFELPPTGQHTWQFGLTRMLLGYAME
SHQGEWNDVLPYDESSGLIAELVGHLASLLMQLNRWRRELMQSRTLEAWQPLCREMLNDF
FLPDTDTEAAMALIEQQWQAIIDEGISSHYGEAIPLSLLRDELTQRLDQERISQRFLAGP
VNICTLMPMRSIPFKVVCLLGMNDGVYPRALAPLGFDLMSHQPKRGDRSRRDDDRYLFLE
ALISAQQKLYISYIGHSIQDNSERFPSVLVQELVDYIGQSHYLPGDEERNCDESEQRVKK
HITHLHSRMPFDPTNYVDDEQQSYAREWLPAARKEGQAHTDFIQELEPLPIETLTFEQLQ
RFWAHPVRAFFQQRLQVSFRSEESEIPDAEPFTLDGLNRYQLNQQLLNALVEGESAQTLF
RRYRAAGQLPYGAFGEIAWDMQCQEMQALADRVVECRQPGKSLEIDLTCNGIQLTGWLQQ
VQQDGLLRWRPAMLSVSQGLQLWLEHLVYMACGYEGESRLFVRKDGEWRFPQMSSEQALG
YLELFIEGYRQGMNKPLLLLPESGGAWIKTCYDAQNDAMLTDDATLQKARSKFLQAYEGN
MMVRGEGDDVWYQRLWRTLAPEHFDAITHEAERYLLPLFKFNQS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctatcactcaaatcgtctggatgtgctggaagcgctgatggaatttatc
gtcgagcgtgaacacccagccgatccctttgagccagaaatggtgctggttcaaagcacg
ggtatggctcagtggctgcaaatgtccctggcgcaaaagttcggtattgcggcaaatatc
gaattcccactcccggcaagtttcatctgggaaatgtttgtccgcgttctgccagaaatc
cctaaaaagagtgaatttaacaaacaaagcatgagctggaagttaatgtcgctgctgcca
gatatgctggcgagcgatgagtttgccatgttgcgccactacctcagcgacgatacggat
aaacgcaaactgttccagttggcttctcgtactgcggacctttatgaccagtatctggtt
tatcgcccggattggctgacacgatgggaagcgggagcgcttgtagacggcctgcctgaa
gcgcaaatctggcaagcaccgctgtggaaagcgctggtggagcatacggcaaaactgggg
caaccgcagtggcaccgtgccaacctgtatgagcgctttatctcgacgctggaaacagtc
tctgaaccgcctgccgggttgccgtcgcgtgtgtttatctgcgggatttcagctttacca
ccggtttacctgaatgctctaaaagccctggggaaacacgtcgatatccacattctgttt
accaacccatgtcgccattactggggcgatattcaggaccctaaatggctcgcgcgactt
gttgcccgccagagacggcggatctttgaagaccgcgccatcccacttttcaaagacagc
gataatgctgcgcagcttttcgacgaagaaggtatccaggacttaccgaatccactactg
gcctcctggggaaaactaggccgtgactacatccacatgctgtctgatatttcctcatcg
ggcgagggcgacgtggatgcttttgcagagatcacgccggacagcctgctgcacaacgta
cagctcgatattctcgaccttgataatcgcgccatcgcgggaataaccgctgaggaattt
gctcgcagcgacaaaaaacgacgactggatcctgaggatcgcagcgttaccgtgcatgta
tgtcacagcccgcagcgcgaagtcgaagtacttcatgacaaattgctggcgatgctgcag
gactgccctgaactgacgccgcgcgatattgtggtcatggtggcggatatcgacagctac
agtccgtttattcaggccgtattcggcagtgccactggcgatcgctacctcccgtacgcc
gtttctgaccgtcgggcgcgccagtcacatccggctttgcaggcctttctcagcctgctt
gctctgccggacagtcgctttatttctgaagacgtactggcgcttctggatgtcccggtg
ctggccgcccgctttaatatcgatgaagaaggactgcgctatctgcgccagtgggtgaat
gaatctggcgttcgctggggtatcgacgatgacaacgttcaggaattcgaactcccgcca
accggtcaacacacctggcagtttggcctgacgcgtatgctgctcgggtatgcgatggaa
agtcatcagggagagtggaacgacgtcctgccctacgatgaatcatccgggctgattgcc
gaactggtcggccatctggcatcacttttaatgcagctaaaccgctggcggcgtgagctg
atgcaatcccgcactctggaagcgtggcagccgttgtgccgggaaatgctgaatgacttt
ttcctgcccgatacagacactgaagccgcaatggcgcttattgagcagcaatggcaggcg
attattgatgagggcatttcgtcacattatggtgaagccattcccttgtcactgcttcgc
gatgagttgacgcagcgcctggaccaggaacgtattagccagcgcttcctcgcggggcct
gtcaatatttgtaccttaatgccgatgcgttcgattccattcaaggtggtttgcctgctg
gggatgaatgacggcgtttatccgcgtgcccttgcgccgctgggcttcgatctcatgagt
catcagccaaagcgcggcgatcgtagccgacgcgacgacgaccgctacctcttcctggag
gcgcttatctcggcccagcaaaagctttatatcagctatatcgggcattccattcaggat
aacagtgagcgcttcccatcagtactggtgcaagagctggtggattacattgggcaaagc
cactatctgcccggtgatgaagagcggaattgcgatgaaagcgagcagcgggtaaaaaaa
catatcacgcatctccacagccgtatgccgttcgatccgaccaactatgtcgacgacgaa
cagcaaagctatgcgcgtgaatggctccccgccgcgaggaaagaggggcaagcccatacg
gatttcattcaggagcttgagcctcttccgatcgaaacgctcacctttgagcagttgcaa
cggttttgggcgcacccagtacgcgcttttttccagcagcgattgcaggtgagcttccgc
tcagaagagagtgaaattccggatgcagaacctttcactctcgacggattaaaccgctat
cagctcaatcaacagctgctcaatgcactggtcgaaggggaaagcgcccaaacgttgttc
cgtcgctatcgggctgcggggcagctaccctacggcgcatttggggaaatcgcctgggac
atgcagtgtcaggagatgcaggccctggctgaccgggtagtggagtgccgacagccgggt
aagagtcttgaaatcgatctgacatgcaacggtattcagctaacgggctggttacagcag
gtgcagcaggatggacttttgcgctggcgtccagcgatgctcagcgtttcacaaggtttg
caactctggctcgaacatcttgtctacatggcgtgtggttacgaaggtgaaagccgtttg
tttgtgcgtaaagacggagaatggcgattcccgcagatgtcctctgagcaggcccttggg
tatctggaactgttcattgaaggttatcggcaggggatgaacaaaccactgctgttgctg
ccagaaagtgggggagcatggataaaaacctgttacgacgcgcagaatgatgccatgtta
acggatgacgccacgctgcaaaaagcacgcagcaagtttttacaggcgtacgaagggaac
atgatggtgcgtggagagggtgatgatgtctggtatcagcgtttatggagaacgctggcg
ccggaacatttcgatgccattacgcacgaggccgagcgctatctgttacctttgtttaaa
tttaatcagtcctga
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