Lelliottia jeotgali: LJPFL01_3972
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Entry
LJPFL01_3972 CDS
T05035
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lef
Lelliottia jeotgali
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lef03021
]
LJPFL01_3972
Transcription machinery [BR:
lef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LJPFL01_3972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_3
2Fe-2S_thioredx
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
ASV57335
LinkDB
All DBs
Position
complement(4239134..4239991)
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AA seq
285 aa
AA seq
DB search
MTKEMQTLALAPVGNLESYIRAANTWPMLTAEEEKELAEKLHYQGDLEAAKTLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKAKQRLGWFNQEEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSSDDDAQDSQPMAPVLYLQDKTSNFADGIEEDNWEDQAANKLTHAMEGLDERSQAI
IRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctttagcccctgttggtaacctggaatcttatatc
cgggctgcgaacacctggccgatgttgacggctgaggaagaaaaggagcttgctgaaaag
ctgcattaccagggcgatctggaagcagctaagacgctgatcctgtctcacctgcgcttt
gttgttcacgttgctcgtaattactcgggctacggcctgccgcaagcggatttgattcag
gaaggcaacatcggtctgatgaaggctgtacgtcgcttcaacccggaagtgggtgtgcga
ctggtctcgttcgccgtgcactggattaaagctgaaattcacgaatacgtcctgcgtaac
tggcgtattgtgaaagtcgcgacgaccaaagcgcagcgcaaactgttcttcaacctgcgt
aaagccaagcagcgtctgggctggttcaatcaggaagaagtggaaatggtcgcgcgtgag
ctgggcgtttccagtaaagacgtgcgtgagatggaatcccgtatggccgcccaggacatg
acattcgatatgtcttctgacgacgatgcgcaggatagccagccgatggcaccggttctg
tatctgcaggataaaacctctaactttgccgatggcatcgaagaggataactgggaagat
caggctgcgaacaaactcacccacgcgatggaaggtctcgacgagcgtagccaggcgatt
atccgcgcccgctggctggacgaagacaacaagtccacgctgcaggaactggccgaccgc
tacggcgtctccgctgagcgtgtgcgtcagcttgaaaagaacgccatgaaaaaacttcgc
gccgctatcgaagcgtaa
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