Lodderomyces elongisporus: PVL30_001488
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Entry
PVL30_001488 CDS
T01116
Symbol
RAD16
Name
(RefSeq) DNA repair protein rad16
KO
K15083
DNA repair protein RAD16
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_001488 (RAD16)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
PVL30_001488 (RAD16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
ResIII
DEAD
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
Shugoshin_C
zf-rbx1
zf-C3HC4_3
zf-Nse
zf-RING_2
Prok-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
5234443
NCBI-ProteinID:
XP_001526690
UniProt:
A5DVY2
LinkDB
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Position
2:complement(522693..525401)
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AA seq
902 aa
AA seq
DB search
MSDSESSLSDIGGGFVVDNKKSNKRRKVGSRNANGSTRQTPRRRASTKNISYAEPSDLDD
DDLVEEGEGDAKNISDVEIDSDTFANEEVPRRHRKTRELNTRASGKNSNSKAKRPIEIYS
DDEDDDDDNDDEEFTLSLEDNVDSNTSDDDVVEVVGSSIMHRNGRQPKTTVELISDSDDD
NQPLSSRPIPASQGSANGTNEGHVNGHGDGHGEGDDVASSAKPKRAPRKKSSTPRQRKKK
EVKPKMTHYERTTNNLFTQHPELATTFSDLKNCKGITPERAPHPVGMTLKMLPFQLEGLN
WLLKQEEGKFQGGILADEMGMGKTIQTIGLFMDDPTKKPNLVVGPTVALMQWKNEIEKHT
DGKLKVLLFHGNTRVNKVAELEKYDVILTSYSVLESSFRKQQYGFKRKGVTVKEKSALHN
THFYRVVLDEAHNIKDRTSNTSRAANQLVTQKRWCLTGTPLQNRIGEIYSLIRYMKLYPF
HMYFCTKCDCASNDWKFSNGRTCDGCGHTGMLHTNFFNHFMLKNILKFGLEGDGMDSFQN
LRLLLQNIMLRRTKIERADDLGLPPRIVEIRLDRFNEEERDLYTSLYSDSKRKFNDYVAD
GVVLNNYANIFTLITRMRQLADHPDLVLKRYGTNQIAKQIDGVIMCQLCDDEAEEPIESK
CHHRFCRMCIQEYVESFDGASNKLTCPVCHIGLAIDLEQPAIEVDEELFTKASIVNRIKQ
GSHGGEWRSSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFQTAKLS
GSMSPQQRDNTIKYFMDNTEVEVFLVSLKAGGVALNLCEASQVFLMDPWWNPSVEWQSMD
RVHRIGQKRPIRITRFCIEDSIESKIIELQDKKANMINATINHDQAAINKLTPDDLQFLF
MN
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctgagtctagtttgagtgatattggcggggggtttgttgtggataataag
aagagtaacaagagacggaaagttggatcgagaaatgcaaatggtagtacgcgccagaca
ccaaggagaagagcaagtacgaaaaacatttcatacgccgaaccaagcgatttggatgac
gacgatttagtagaggaaggagaaggtgacgcgaaaaacattagtgacgtggagattgac
tccgatacatttgccaacgaggaagtccctagaaggcatagaaagacgcgtgagctcaac
acgcgtgctagtggaaagaacagcaacctgaaggccaaaagaccaatagagatctattcc
gacgatgaagacgacgacgacgacaacgacgacgaagaatttacattaagtttggaagac
aacgtggacagtaacacgtctgatgatgacgttgtggaggttgtggggtcaagtataatg
catagaaatggtcgtcaacccaaaacaactgttgaactaatcagtgacagcgatgatgac
aaccaaccattatcatcgagacctattcctgcactgcaaggttcagctaatggtaccaac
gagggccatgttaatggccacggtgatggccatggtgaaggtgatgacgttgcatcctct
gctaaaccaaaaagagcgcctagaaagaagtcaagtacgccacgtcaaaggaagaagaag
gaagtcaaaccaaaaatgactcattatgaacgtacaactaataatcttttcactcagcac
ccagaacttgccacgacattctccgatttgaaaaattgtaaaggcattacacccgagaga
gctccacaccctgttggaatgactcttaagatgttgccttttcaactagaaggactaaac
tggcttttgaaacaggaagaaggtaagtttcaaggtggtatattggcagatgagatgggt
atgggtaaaacgatccaaaccattgggttatttatggatgatcctacaaaaaaacccaat
ttggttgttggtcctacagtggcgttgatgcaatggaaaaatgagattgaaaaacacacg
gatgggaagttaaaagtgttgttgtttcacggaaacacaagggtgaacaaagtagccgaa
ttggagaaatacgatgttatcttaacttcgtattccgtgttggaatcatcttttagaaaa
caacaatatggtttcaagagaaaaggggtaacggtgaaggagaagtcggcacttcacaat
acacatttttaccgagtagtgcttgatgaagcacacaatatcaaagatcgtacatcaaat
acatctcgagcagcaaaccagttggtgactcaaaaaagatggtgcttgactggtacgcct
ttgcaaaataggattggagaaatatattccttgattcgttatatgaagctttatcctttc
cacatgtatttttgtaccaagtgtgattgtgccagtaacgactggaaattttccaatgga
cgtacttgtgatggttgtggccatacagggatgttgcatacaaattttttcaaccacttt
atgttgaaaaatatattgaaatttggattagaaggggatggaatggatagtttccagaat
ttgcgattgcttttgcagaatataatgttgcgaagaaccaaaattgaaagagctgatgat
ttgggattaccgcctagaattgttgagattcgactcgataggtttaatgaggaagagagg
gatttgtacacttcgctttatagcgattcgaagagaaagtttaatgattatgtagccgat
ggagttgtcttaaacaactatgctaacatttttacattgatcacacgaatgagacagctt
gctgatcatcctgatttggtgttgaagcgatatggtaccaatcagattgccaagcagatt
gatggggtcattatgtgtcaactttgtgatgatgaggcagaggagcctattgaatccaag
tgtcatcatagattctgtcgtatgtgtatacaggagtacgtggagtcattcgatggtgca
agcaacaagttgacgtgtcccgtgtgtcatattggattagctatcgatttggagcaacca
gcgatagaagtcgacgaggagctttttacaaaggcttctatagtcaatagaatcaagcaa
ggatcgcatggtggcgaatggaggtcatcgaccaaaattgaagcgcttgttgaggagtta
tacaagctcagatctgatagacataccatcaaatcgattgtgttttcacagtttacatcg
atgttagacttgattgaatggagattaaaacgtgcaggttttcaaacagcgaaattgtct
ggttcgatgtcgccgcaacaacgtgacaatacaattaagtactttatggacaataccgaa
gtggaggtgtttcttgtatctttaaaggctggtggtgttgcgttaaatctttgcgaagct
tcgcaagtatttttgatggatccatggtggaatccaagtgttgaatggcaatcgatggac
cgtgtgcatagaattggtcaaaagagacccatcagaatcacgagattctgtattgaggat
agtatagagctgaagattattgagctacaagataaaaaagctaatatgatcaatgcaact
ataaatcacgatcaagcagcaataaataagttgactccggacgatttacagtttttattt
atgaactag
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