Leucoraja erinacea (little skate): 129695617
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Entry
129695617 CDS
T09122
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129695617
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129695617
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129695617
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3H2C3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
129695617
NCBI-ProteinID:
XP_055488699
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All DBs
Position
3:55095166..55218579
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AA seq
620 aa
AA seq
DB search
MPIASPSHSAQEPCLYPRLRTGPSPPKDTGDRSRDQGASAEQPRPPSNVAAGGGLGPEGP
LRQEPWDRGAGRFPPPAQHPLLDAPRTRSRSRSGLGGGGINPPRAGGLQPQAGCQGQGHG
DRPAMGHGGAAGAARPAGGMDTSFQYHPSPHDLPLIEDSDKSEESPSPKRQRLSHSFFEY
APVSPAPSPPMRPWEMTSNRRPPSARPNQHYFSGERCNTPSRSRRSPPVRRQRGRRERLT
RNSSLSQDENYHHHPYGQQPTVEEPRAFHPPNISARMLHPAAHPPQQNAVVVDIHEQIHQ
GTVPVSYTVTTVAPHGIPLCTGQHIPACNTQVPGCSVVFSGQHYPVCSVPPPMLQACSVQ
HLPVSYAAFPPLISSDPFILHPPHLSPHHHPHVPPPGQFVPFQTQQSRSPLQRIENEVEL
LGEHLPVSGFAYPPSPHPPTLPPSAPLQFLPHDSLHQELPFGVPYPHFMPRRLPGRRYRS
QQPLPPPPYHPSFLPYFLSMLPVPPTVGPAFSLELDVEDGEVENYEALLNLAERLGEAKP
RGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK
ANRTCPICRADASEVHRDSE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcctcgccttctcactcggctcaggagccctgcctctacccccggctgcgg
accgggccctctccgcccaaagacaccggcgatcgcagccgcgaccaaggcgcgtccgca
gagcagccgcggcccccgagtaacgtggcggcgggcggcgggctgggtcccgagggcccg
ctgcggcaggagccgtgggaccggggtgcgggcagattccccccgcctgcccagcacccg
ttgctagacgctccccggacgcgctccagatccaggtcgggactcggtggcggcggcata
aacccgccgagggcaggcggcctccagccacaggccggctgccagggccagggccacggc
gatcgtcccgccatggggcatggaggcgcggccggagcggcgaggccagcaggtggcatg
gatacttcctttcaatatcacccaagtccgcatgacctgcctttaattgaagatagtgat
aagagtgaagaaagcccaagtcctaagcgccagcgcctctctcattcgttttttgaatac
gcaccggtatctcctgctccatcaccaccaatgcgcccatgggagatgacttcaaatagg
cggcctccctcagctcgaccaaatcaacattacttctcaggggaaagatgcaatacacct
tcacgcagtaggagaagtcctcctgttagacgacagcgagggagacgtgaaagactaact
agaaatagttctctgagccaagatgaaaactaccaccatcatccttatggacaacagcca
actgtggaagaacccagagcatttcatcctccaaatatatctgcacgcatgctccaccct
gctgcacaccctcctcagcagaatgctgtggtggttgatatccatgagcagattcatcaa
ggcaccgttcctgtctcgtatactgttactactgtagcaccacatggtatcccactttgc
acaggacagcacatcccagcgtgtaacacacaagttccagggtgttcggtcgtatttagt
ggacaacattatcctgtgtgcagtgttcctcctccgatgctccaagcctgttctgtacaa
catctgccagtttcatatgctgcatttcctcctcttatctcaagtgatccctttatattg
caccctccacatctgtcaccccaccatcatcctcatgtgccacctccgggtcagtttgtt
cctttccaaacacaacagtcacggtcgcctttacaaaggatagaaaatgaagtggagcta
ttgggagaacatcttcctgtcagtggtttcgcttatcctccgtcgccacatccgcctacc
ctgcctccatctgcaccgctccagttcctgccacacgactctcttcaccaagagctgcca
tttggagttccgtatcctcatttcatgcctcgaagactgccaggacgcagatatcgctca
cagcaacccttaccacctccaccatatcatcccagcttcttgccatatttcctatcaatg
cttccagtgccacctacggtgggaccagcttttagtttggaattggatgtggaggatggc
gaagtggaaaattacgaggcacttcttaacctggcagaaagactgggagaagccaaaccg
cggggacttacaaaagcagacattgaacaacttccatcatatagatttaaccctaacaac
caccagtcggagcaaacattatgcgttgtgtgcatgtgtgattttgagtcaagacaacta
cttagagtcttaccctgcaaccatgagtttcatgccaagtgtgtcgacaaatggttgaag
gccaatcgtacgtgtccaatttgtcgagcagatgcttcagaagttcaccgtgattcagaa
tga
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