Leucoraja erinacea (little skate): 129696658
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Entry
129696658 CDS
T09122
Symbol
tshz1
Name
(RefSeq) teashirt homolog 1
KO
K09236
teashirt
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129696658 (tshz1)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129696658 (tshz1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
zf-C2H2
Zap1_zf1
zf-C2H2_6
zf-C2H2_3rep
Actin_micro
DUF760
Motif
Other DBs
NCBI-GeneID:
129696658
NCBI-ProteinID:
XP_055490724
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All DBs
Position
4:86948567..87189049
Genome browser
AA seq
1048 aa
AA seq
DB search
MPRRKQQAPRRSAAYVPEEELKAAELDEDLPEKELPPEDDLDHEFQCPEEDEEIKEEASY
PTSPASTPVHPDPGYRSPASDTSDPLADLRSISSKEGQERDEGVPGEDVLQASRDSLAQM
KAAYSNLLSSSYWTSLGLNLKSPNQASGSGSSNGSSHNGNGGGLGYDWHQAALAKTLQQT
SYGIIPEPSLFSTVQLYRQQNKLFGSVFTGASKFRCKDCSSAYDTLVDLTVHMNETGHYR
DDNRDRDSDNPRKWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY
QKVPLKEPVPALASKLLPPNKRRAQQEPQPCSPESASNPSGLPAGESSSGQRAANPYVTP
NNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTNSASKKG
KQLVFDTVVEEKIQSIPLPPSAPARLVVPTAQAKLETSPPPMADERKEQEEEPAEEDEKE
REIKEEREDPEEKSESTSQYQYLREEDLDESPKGGIDILKSLENTVATAINKAQNGAPTW
GGYPSIHAAYQLSGAIRPFHPAVQNVQSTPFYTSNLKPPSSEHLAMVEPSECQSPPPLKS
NVHAMEELVEKVTGKMAVKAEEKAAEKERMVTPRIKVTGGSSSPSVRDPPRADDNDTSTQ
MSRDGDGHEVKVKKETNLDGPFPNGNECLRSTVSNGCNSMAIITDQSPESPFVNPLSALQ
SIMNTHLGKAAKPLSPSLDPLAMLYKISNSVLDKPIFPATQAKQADIVDRYYYENNDQPI
DLTKSKSNKKLISAMTETILSSSRENALLDISDMVKNLTGRLTPKSSTPSTVSEKSEADV
SSFEDTLDDISPVQKRKGRQSNWNPQHLLMLQAQFAASLRESSEGKFIMSDLNLHERVHI
SKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDCASQFRTPASYIAHL
EIHLGFSMKDLSKLSVEQLREQQAVAKVIPNRPLNSVGMSEEDVNSTFQCKMCNRTFVSK
HAVKLHLSKTHGKSPEDHLLYVTEFEKQ
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaagaaagcaacaagcaccgcgacgctcggcagcgtatgttcctgaagaagag
ctgaaggcagccgaacttgacgaagaccttccggagaaggaactgcctccggaggacgac
ctggaccacgagttccaatgccccgaagaggacgaggagatcaaagaggaagccagctac
ccgacctcgccggccagcacgccggtacacccggacccaggttacaggtcccccgccagc
gacaccagcgacccgctggctgatctgcggagcatctcctccaaggaagggcaggagagg
gatgaaggggtgccaggtgaggatgtcctgcaggcttcacgggacagcttggcccagatg
aaggcggcctattccaacctcctgagcagctcctactggaccagcctgggcctgaacctg
aagagccccaatcaggccagcggcagtggcagcagcaacggcagcagccacaacggcaat
ggcgggggtttaggctacgactggcaccaggcggccttggctaagacgctccagcagacg
tcgtacgggatcatccccgagcccagcctcttcagcacggtgcagctttaccggcagcag
aacaagctgttcggctccgtcttcaccggggccagtaagttccgctgcaaggactgcagc
tcggcctacgacaccctggtcgacctcaccgtgcacatgaacgagaccggccactaccgc
gacgacaaccgggaccgggactccgacaacccccgcaagtggtccaagcccaggaagcgt
tccctcatggagatggagggcaaggaggatgcccagaaggtcctgaagtgcatgtactgt
ggacactcctttgagtcattgcaggacctcagcgtccatatgatcaagaccaagcactac
cagaaagtgcctctgaaggagcccgtgccagccctggcgtccaagctcctgccccccaac
aagagacgggcccagcaggaacctcagccctgctccccggaatctgcttccaacccctcg
ggcctacccgctggagagtcgtcctcgggccagagagcggccaacccttacgtgactccc
aacaatcgctacggctaccagaatggagccagctacacctggcagtttgaagcccggaag
gcgcagatcctcaagtgcatggagtgcgggagctcgcacgacacgttgcagcagctgacg
gcccacatgatggtgaccggccacttcttgaaggtcaccaactcagcctccaagaaaggc
aagcagctggtgttcgacacggtggtcgaggagaaaatccagtccattcccttgcctcca
tccgcaccggcacggctcgtggtccccactgcccaagccaagctcgaaacctccccgccg
ccgatggccgacgagaggaaggagcaggaggaagagccggcggaagaggatgagaaagag
agggagataaaggaggagcgggaggatcctgaggaaaagtcggagtcgacttcccaatac
cagtatctgcgggaggaagatctggatgagagtcccaagggcggaattgatatcctgaaa
tctctggagaacacggtcgccaccgccatcaacaaggctcagaatggtgcccccacatgg
ggaggctatcctagcatccatgctgcctatcagctctctggagcaataaggcctttccat
ccagcagtgcagaatgtacagtcgactccattctacactagcaacttaaagcccccgtct
tccgaacatcttgccatggtggagccctcagagtgccaatcgcccccgcctctgaagagc
aacgtccacgccatggaggaactagtagagaaggtcacggggaagatggccgtcaaggct
gaagaaaaggcggcggagaaagagcggatggtcacgcccaggatcaaggtgaccggtggc
tcctcgtcgcccagcgtgcgggaccctcccagagccgacgacaatgacacatcaacgcaa
atgtcgagagacggcgacggccacgaggtgaaagtgaagaaggagaccaatttggacgga
ccgttcccaaatggtaacgagtgtttgaggtcaacagtcagcaatgggtgtaacagtatg
gcaatcatcactgaccagtcacccgagtccccgtttgtcaatccactcagtgcactgcag
tcaatcatgaacacacacttgggcaaggcagctaagcccctgagccccagccttgacccc
ttggccatgctgtacaaaatcagcaacagtgtgctggataagcccatcttccctgccaca
caggccaagcaagcagatatcgtagaccgatactactacgagaacaacgatcagcccata
gacttaaccaaatcaaagagcaacaagaagctgatttccgccatgacggaaacaattctc
tcgtcttcgcgggaaaatgcgctattggacatctccgacatggtgaagaacctcacaggg
cggctgacacccaagtcgtcaactccttcgacggtgtcggagaaatcggaagccgacgtc
agcagcttcgaggacaccttggatgatatatctccggtacagaagagaaagggcaggcag
tctaactggaatccccaacacctcctgatgctgcaagcccagttcgcggctagtttacgg
gaatcttctgaaggcaaattcatcatgtcggacttaaacctccacgagcgggtgcacatt
tcaaagtttaccggcctttccatgaccacgataagccattggctagccaatgtcaagtac
cagttgagaaggacaggtggaacaaaattcctgaagaacttagacacaggtcacccggtt
ttcttctgtaatgattgtgcctcccagtttaggactcctgccagctacatagctcacctg
gagattcatttaggattttctatgaaggacctctccaagttatcagtagagcagcttcgc
gagcagcaggcagttgctaaggtgataccaaatagacccctgaactcagttgggatgtca
gaggaggatgtaaactcgacattccagtgtaaaatgtgcaacaggacatttgtaagcaaa
catgcagtcaaattgcaccttagcaaaacacatggcaagtctccagaggaccatctgttg
tatgtaactgagtttgagaaacaatag
DBGET
integrated database retrieval system
