Leucoraja erinacea (little skate): 129699821
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Entry
129699821 CDS
T09122
Symbol
aff1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129699821 (aff1)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
129699821 (aff1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
129699821
NCBI-ProteinID:
XP_055495919
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Position
1:complement(96634497..96764069)
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AA seq
1281 aa
AA seq
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MATHSSLYNEDRNLLRIKERERRNQEIHLNKEPFLENAPLFGEPYKTNKGDELSSRIQNM
LGNYDEIKDLISNISQQNFIGIPKRAVPLISQEKCLLGSNKSNSSMQPSLHSKNPRLMGP
HNSAPLKVDCSSQKSTALTEQNSQSSNHNAKSHKSLHNRSQNKDNSSKGRESWNSHCGRD
DQQEDVDNQPTVQLSKLQDFQPLLQLSSLVQPLSPLTPQSPIHSSAFTNSKLQSTISKDC
PPSKSPHELGVHSGDSENLSSGLNAPVPNQHASQTFPPSLPSKPNLTQQKPTAYVRPMDG
QDQAPSKSPELKTPSEDYSEESFRNIAEVKVCARTKLSKLKIPSQPVEETLSNDVNCVEE
ILKEMTHSWPPPLTAIQTPSTTEPSKFPFQNKDTHVPSGFVGHKKCDIPPKNSESKKLTL
EHDLQISSSDDSDVDQVTEKPVPTVPKSASLLPQSDNILSRHSSGGLNNLSESGNSSGSD
SESESTSTDSEGASRAPTPEPDPSPANKWQLDNWLNVSQSAMPSKSHSETSNGHISQDSQ
RSDAKEVHDDTDSNREKKTAKESSPSRGKHKKSPALHNSNDQRQSSGEKQPHKPVPEENQ
DNESYKYGDKNQLCTEQAKVKVKVGQRSNEKRETESVPKMSSERKKHKSPIQNAPKCMEF
TDKSSLPSDLSSNKDQLPSNCNLPSATLVPQGQENDENEANISQLAKEVSRTTYHKSAEV
RNGNEPNTGKLATGMKDVNRTTHFQPANNDKQVTRTNINKSGGQIGEEIYSNVNKPAGKV
KEENGGSTRKATAKESRTKPGKPVLQTKANILKDQVLSTAGVGGLPSPIRESTVNWPLVV
KIDLSLLSRIPSPSSKEGKLPKNCATEHTSQKNKESLKESKGSKTKRKHGIDVEASENKK
QRLDKENKLSTSSHKDSSHKRVTTCFPEKDKPFVPPLPSSAQKLAKVTHKRPDSTSSSSN
QVSTMSASNTKVKSSMNISASGLLPSKHKRMEDKQSGHIKSKVSYQGTTSNTTPEQFLPN
GNSKPTRPILKFDDKQYSVEYHLQEAKRIKHKADVMLDKIGKAFNYLDAALSFAESGIAM
ESEAQPPKSAYTMFSETVDLIKYILKLINYNDSSATPVEKMFVVLCIRCQSLLSMAMFRF
KKDTALKYSRTLTEHFKSSSRTAQASSPRVARSTGTPSPLSQTPSPASSGGSQPGSASNG
GSVAIPHAIHQLASTYVNITSIFLQGHDLWEQADALAKKNREFFMELDAAVGLLSLTSSM
TELVHYIRQGLHWLRLETKLL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggccactcactccagcttgtacaatgaggacagaaacttgcttcgaattaaagaaagg
gaaaggagaaaccaagaaattcatctcaacaaagaaccttttcttgaaaatgcccctctc
tttggtgagccatacaagaccaataaaggggacgaactttctagtcgtattcaaaatatg
ctgggcaactacgatgagatcaaggacttaataagtaatatctctcagcagaacttcatt
ggcatacccaaaagggctgttcctttgatttcacaagaaaaatgcttacttggttcaaac
aaaagtaatagttcaatgcagccttcattgcacagcaaaaatccacgattaatgggacct
cataactctgctccattaaaagttgactgctcctctcagaaaagtactgcattaacagaa
caaaatagccaaagttccaaccataacgctaaaagtcacaaatcacttcataatcgaagc
caaaataaggacaactcttctaaaggccgagaatcttggaacagccattgtggcagggat
gatcagcaagaagatgtggacaatcaacccacggtccagttatcaaaattgcaagacttt
caaccgttgttacagttgtcctcgcttgtacagcccttgtctcctctgacaccacaatcc
cccatacattccagtgcatttaccaactccaaactgcaaagtaccattagcaaagactgt
cctccttcaaaatctcctcatgaactgggcgtgcactccggtgattctgagaacttgtcc
tctggtctgaatgctcctgttcccaaccaacacgcatctcaaacatttccaccatctttg
ccgtcgaaaccaaacctaacacagcaaaagcctacggcctatgtgagacccatggatggt
caagaccaagcccccagtaagtcccctgaactaaagacgccttcagaggattacagcgag
gagtcatttagaaacattgccgaggtgaaagtatgtgccaggacaaagctgtccaaactt
aaaattccttctcagccagttgaggaaacgttatcaaatgatgtcaactgtgttgaagaa
atcctaaaggaaatgacacattcatggccaccacctctcactgccatccaaacacctagt
acaacagaaccatcaaaatttcctttccaaaacaaggacacccatgtcccttctggcttt
gtaggacacaaaaaatgtgatattccaccaaaaaattcagagtcaaaaaaactgacgctt
gaacatgacctgcagatcagcagtagtgatgacagtgatgtggatcaggtcacggaaaag
ccagtgcctaccgttccgaaaagtgcttccttgttgcctcagagtgataatattttatca
agacattccagtggtggcttaaacaacttaagtgaatctggcaattcatcaggctctgat
tcggagagtgaaagcacctctacagacagtgaaggagcatcaagggctcccactcctgag
cctgatccttcaccagcaaataaatggcagcttgataattggctgaatgtcagccagtct
gccatgccttccaagagccacagtgagacatcaaatgggcacatttcccaggacagccaa
agatctgatgcaaaggaggttcatgatgatacggactccaacagagagaagaaaactgca
aaggaatcttccccaagcagaggtaaacataagaaatcccctgccctgcacaatagcaat
gatcaacgacaaagtagtggtgaaaaacaacctcataagcctgtgcctgaagaaaaccaa
gataatgaatcttacaaatatggtgataaaaatcagctgtgcacagaacaggccaaagtc
aaagtaaaagttgggcagcggtcaaacgagaaaagggaaactgaatctgtacccaagatg
tcatcagagaggaaaaagcacaagagtcctatccagaatgctcccaaatgcatggagttt
acagataaaagctctctaccctcggacttaagttccaataaagatcagctaccatccaat
tgtaatctaccttctgctacgcttgtacctcagggacaagaaaacgatgaaaatgaggct
aacatcagtcaattggcaaaagaggtaagcaggactacctaccataaatctgctgaggtc
aggaatggaaatgagccaaacactggcaagcttgccactgggatgaaagatgtaaacagg
actacccactttcaacctgctaataatgataagcaggtaaccaggaccaacatcaacaaa
tctggcggccagattggggaggagatttacagcaatgttaacaaacccgctggtaaggtc
aaagaagaaaatggtggaagtactaggaaagccactgcaaaggaaagtaggactaaaccg
ggtaaacctgtccttcaaacaaaggccaacattctcaaggatcaggttttgtcgaccgcg
ggagttggaggattgccatctccaataagagagagcacagttaactggccattagtggta
aaaatcgatttaagcttgctctcaagaattccatcaccatctagcaaagagggcaaacta
cctaagaattgtgcaacggaacataccagccagaagaataaggaaagtttgaaggaaagc
aaaggaagcaagaccaagagaaaacatgggattgacgtggaagcaagtgagaacaagaag
caaaggttggataaagaaaataagttgtccacttcaagccataaggattctagtcataag
cgagttactacatgcttccctgagaaggacaaaccatttgtaccgccacttccatcttct
gcacagaaactggcgaaggttacccacaaacggcctgacagtaccagtagttcttccaac
caagtctccactatgagtgctagtaataccaaggttaagagcagcatgaatatctcagcg
tcaggattgttaccttcaaagcacaaaagaatggaggataaacagtcaggacacataaaa
agcaaggtgtcttaccagggcactaccagtaataccactccagaacaattcctcccgaat
ggaaactccaaaccaacaaggcctatactcaagtttgatgacaagcaatattcagtagaa
tatcacttgcaggaagccaaaagaataaagcacaaagctgatgtcatgttggacaaaatt
gggaaagctttcaactatttggatgctgcattgtcctttgcggagagtggaatagcaatg
gaaagtgaggcacagccaccaaagtctgcttacaccatgttttctgaaactgtggatctg
atcaagtatatcttgaaactaataaactacaatgactcatcagcaacgcctgtagaaaaa
atgtttgtagtattatgtatccgctgccagtctctgctctcaatggcaatgttcagattt
aagaaagatactgcattgaagtactcgaggaccctaactgaacatttcaagagttcttcc
aggacagctcaagcttcatctcctcgtgttgccaggagcactggcacaccttctccactg
tctcagacaccatcccctgccagctctggaggctcccagcctggatctgccagtaatggt
ggaagtgttgccattccacacgcgattcatcagctggcctccacctatgtcaacatcacc
tccattttcctccaaggccatgacttgtgggaacaagcagatgcactagcgaaaaaaaac
agggaattcttcatggagcttgatgcagcagttggccttttatccttgaccagcagcatg
actgaacttgtacactacatcagacaaggtttacactggttgcgcctggaaactaaattg
ctataa
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