Leucoraja erinacea (little skate): 129701133
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Entry
129701133 CDS
T09122
Name
(RefSeq) laminin subunit gamma-1-like
KO
K06246
laminin, gamma 2
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04510
Focal adhesion
leri04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129701133
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129701133
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_B
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
129701133
NCBI-ProteinID:
XP_055498120
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Position
10:complement(47130780..47191647)
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AA seq
1188 aa
AA seq
DB search
MNAFLLLSGCSFIFTLSYVSGTYVWDGRRYIECGCNHRARQCVWDPLLHEQTGSGTRCLN
CVGHTEGTHCEKCKEGFYPTYQGGHCQPCYCNSLGSTSRSCDEYGRCRCKATGVIGDKCD
KCQPGFYSLSSSGCKRCTCNMAGATRICNADTGDCSCKYNVEGSNCNRCKHGFYNLQPEN
PMGCSACFCFRHSSVCNEDGGYRQDVITSTFDSDTEGWKAQNRRGPDLHIMRSSSSRDII
VQAQNEYAVYFVAPAKFLGNQMLSYGQNLSFTFYLERGGSYPSVEDIILEGASQTLSIQV
NVQNNPMPSTHKHKYNYRLHEGLEYGWKPFITSFEFQRVLSDLKAIKIRGTYTIRSPGHI
DNVVLHTAQPGIGKPAQWVERCTCPTGHEGRFCEKCASDYTRESPHLGRLSRCVRCNCQS
PSETCDPETGSCYTNDQSRNCPDGYYSDPSESSGCRTCPCPGGTRCTVDTDTREVICVGC
PSKTMGKRCEMCEEGYFGNPRAGRPCQPCRCNNNVDPNAVKNCDQWTGECRNCLYNTAGH
NCERCRPGFHGNALASNPSEKCKSCKCDPRGSWSTQCRSDGTCDCKPGVFGDQCDQCAGD
TYYNSTTGCEACPNCYLGVKNKILKHKNVVRDLEILISKMKTNGRPVNDKEFEARLRKAS
ADLHIMMNTAKGIEYKDENNLDALNILNNKFGAESYQLNNIGKSVEGIRKLTLTYESRVR
NTDTLLTNVRTKIQESRDKMDQMPSFPTDPNGGSIPTVLADEARRLADRHQKDAEGIEQS
SDAANKSAFKALQLITQAIKDDQQTTQSVNLLTQQSKQKNDMTEDLDDQANRITAKVERV
SEKAKKNYNDLNNVITIDVMSLENEANQLKSRESAMKFELNSKLDLYETLKNNISDFQID
ITRILEKGDRDNRTATLLQARANAAKYLAEDAVKKGSYTLDQVDRIINNLRDFNARVAIN
KTAAEDALSRIPYIIRTIDNANTMTDRAENQLGNALAIAKDAKGKAELADTIANNIQKKA
VESLFDAEAALNDIMLLDQNVTDANRQLTQLETDFANKQKSVNEDTSMAAKIAGTVGAAT
MNAENAKDSATETMKLINDLLQSMGNPATIDTTKLEHVENSLQIFKNQWINELESSFQQL
TDAAAAQKQTIAAFDRDIVDIRGDIRNLELIRDTLPTGCYNTAAVERP
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcattcttgttactgagtggttgtagctttatttttacattgtcctatgtctct
ggaacctacgtttgggatggtagaagatacatagagtgtggctgcaatcacagagctaga
caatgtgtgtgggatcctctactgcatgaacaaaccggaagtggtacacgctgtttgaac
tgcgttggtcacaccgagggaacacactgtgagaaatgcaaggaaggtttctacccgacc
taccaaggggggcactgtcagccctgctattgcaattcattgggttccacatctcgcagc
tgtgatgaatatggccgctgtcgctgcaaagcaacaggagtaattggagacaagtgtgac
aagtgtcagcctggtttttactcgttatccagcagtggctgcaagcgctgtacttgcaat
atggctggtgctacacggatctgtaacgctgacactggagactgcagttgtaaatataat
gttgaaggatccaactgcaaccgatgcaagcatggtttttacaatcttcaaccagaaaac
cccatgggctgctcagcatgtttctgcttcagacattcatcagtctgcaatgaggatggt
ggttacaggcaggacgtcatcacttccacatttgattcagatactgaagggtggaaagct
cagaaccgccgtggccccgatctccatataatgagatcatcatcatctcgtgacattatt
gttcaggcccaaaatgaatacgcagtctactttgttgctccagccaagtttctgggaaat
caaatgttgagttatggccaaaacctctccttcacattctacttggaacggggtggttct
tacccatcagtcgaagacatcatcttggaaggagccagtcaaacactaagtatacaagtg
aatgtgcaaaacaacccaatgccatccacacacaagcataaatacaactacagactccat
gagggtctagagtatggatggaagccatttataacttcatttgaattccaacgggtgctt
agtgatctcaaggccatcaaaatccgtggcacctacaccatacggagccctggacatatt
gataatgtggtcttgcacacggcccagcctggcattggaaagcccgctcagtgggtcgag
aggtgcacgtgtccaaccggccacgagggacgattctgtgagaaatgtgcaagtgattac
acaagagaaagtccccacctgggacgtttaagccggtgtgtgagatgcaactgtcaaagc
cccagtgaaacctgcgaccccgaaactggttcctgttacaccaatgatcaatccagaaac
tgcccagatggttactactctgatccttctgaatcaagtggctgcaggacatgcccttgc
cccggtggtacacgctgcactgtggacacggatacgagagaggttatatgtgtgggctgc
ccaagtaaaacaatgggtaaacgatgtgaaatgtgtgaagaagggtattttgggaatcct
cgagccggcagaccctgtcagccttgtagatgcaacaataatgtggatcccaatgcagtc
aagaattgtgatcagtggacaggagaatgtcgtaattgcctctacaacaccgcaggccat
aactgtgagagatgcagacctggctttcatggaaacgcacttgcctctaatccatcagaa
aagtgcaaatcatgtaagtgtgacccaagaggttcttggtccacccagtgcaggagcgat
gggacgtgtgattgcaagccaggagtttttggagatcaatgtgaccagtgtgcaggagac
acttattacaacagcaccacgggctgtgaagcgtgccccaactgttatctgggagtcaaa
aacaagatattgaaacacaagaatgtggtcagagatttggaaattctcatctccaaaatg
aagacaaatgggaggcctgtgaatgataaggagtttgaggcaagactaaggaaagcgtca
gcagacctccacataatgatgaacacagctaaagggattgagtataaagatgaaaataat
ctcgatgcactgaatatccttaacaataaatttggtgctgagtcttatcagctgaacaac
attgggaaatctgtcgaagggattagaaaattaactttaacatatgaaagtcgtgtccgg
aacactgacacattgctaaccaatgtcagaacaaagatccaggaaagcagggataaaatg
gaccaaatgccatcattcccaacagatcctaatggaggtagtatcccaacagttctagct
gatgaagctcgtagactggcagataggcatcagaaagatgctgagggcattgaacaatcc
agtgacgctgccaacaagtctgcttttaaggcccttcaattaattacacaagcaatcaaa
gacgatcagcaaaccacacaatctgtcaacctactaactcagcagtcgaaacagaagaac
gacatgacagaggatctagacgaccaagcaaacagaataaccgcaaaagtagaaagagtc
agcgagaaggccaagaagaattacaacgatttgaataatgttatcacaattgatgtaatg
tcccttgagaatgaagcaaatcaactgaagagcagagaaagtgccatgaaatttgagttg
aacagcaaacttgatctgtatgaaactttgaagaataacatcagtgacttccagatagac
atcacaaggattttagagaaaggagacagagacaacaggacagctaccttgctacaagcc
agagcaaatgcagcaaagtacttggctgaagatgctgtcaaaaaaggatcatacacactg
gaccaagttgatcggatcataaacaacctaagagacttcaacgcgcgggtggccatcaat
aaaacagctgccgaagatgctttgagcagaataccatacatcatcaggacgattgacaat
gcgaacacgatgactgatcgtgctgagaatcaactgggaaatgcattggcaattgccaaa
gatgccaaaggaaaagccgaactggcagatacgattgccaataatattcagaagaaggca
gttgaatcgctatttgatgcagaagctgcattaaatgatatcatgttactggatcaaaac
gtgactgatgcaaatagacaattgacacagctggagactgattttgctaataaacagaaa
tctgtgaatgaagatacatccatggcagcgaagattgcaggcactgtaggtgcggcaact
atgaatgcagaaaatgcaaaggattcagcgactgaaacaatgaaattgatcaatgatttg
ctgcaatctatgggtaacccagccacgattgacactaccaagttagaacatgtggagaat
tcacttcagatcttcaaaaatcaatggattaatgaactagaatcaagttttcaacaactg
actgatgccgctgctgcgcagaagcaaacaattgcagcttttgaccgcgacatcgttgac
atccgtggagatattagaaatcttgagctcatcagagacactttacccacaggatgctac
aacactgcagcagttgaaaggccttaa
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