Leucoraja erinacea (little skate): 129702552
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Entry
129702552 CDS
T09122
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129702552 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129702552 (pou2f1b)
03021 Transcription machinery [BR:
leri03021
]
129702552 (pou2f1b)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129702552 (pou2f1b)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
129702552 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
129702552
NCBI-ProteinID:
XP_055500288
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All DBs
Position
13:complement(4229668..4351574)
Genome browser
AA seq
801 aa
AA seq
DB search
MERPKMKSPETKELSRMNNIHKVCWGRRGFFESKMSNPSEAIKPSLDGNEGSTGVQTNGL
DFQRQPITTAGPITTAQALLGQLQQVNYMSDVTNRCFYVQLPGATLQSTASQTLNVQVKN
EESDSSSQHTITQPSLQSSLQNALPQTQLMLAGGQITGLTLTTAQQQLLIQQAQAQLLAA
AVQHSANQQHNAAGATISATAATPMAQIPIGQPIQIQDLQQLQQLQQQNLNLQQFVLVQP
GHPITTNLQPTQFIISQTPQGQQGLIQTQNLLQQLPQQSQANLLQAQPNITFSTQPATPT
RTTIATAPIQSVQQSQSTPKRVDTPNIEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLA
MGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSVDSALSNPSSLASPG
LGIEGLSRRRKKRTSIETNVRVALEKSFLENQKPTSEEIMMIAEQLQMEKEVIRVWFCNR
RQKEKRINPPSSNSGTTTTTKTIFHTPTSMVASTSNLVTSSTPTTLAVNAMQMPVSTAGV
TSFSISGTTASGTAPTNVASVITGLSSAVSTSTVASPALTPSPSASISVTESSSSGDTNT
TQTTSTGLINPLCTSQIMVSASGLQTAGTALQAGIAHIPTGAGLATNPSLAAMAAAAGLT
NPGLMSAPQFAAGGALLSLNPGSLGGALGPALMSNSTLATIQALASSGTLPITSLDASGN
LLFANAASAGGAHNIITGPLILNPQNLSLLTSNPAVSLISAAGTTGHAPSLQMASMTADS
SQNSSFTVTSAGGATNTTKAQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtccaaagatgaaaagcccggaaactaaagaactgagccgtatgaacaatatc
cacaaagtctgttggggcagaaggggattttttgaatctaaaatgagcaatccgtcagaa
gccatcaagccttccttggatggtaatgaagggagcacaggtgtgcaaacaaatggactg
gatttccagcggcagcccatcacaacagcagggccaattacaacagctcaggccttactt
ggacaactacagcaggttaactacatgtcagatgtgacgaacagatgcttttatgtgcaa
cttcctggagcaactttgcaatcaactgcgtcacaaacattaaatgtacaggtaaaaaat
gaggaatcggattcctcgtcccagcatacaataactcagccatcactgcaatcatcgtta
cagaacgccctaccgcagacacagctcatgcttgctggaggccagatcaccgggctaacg
ttgacgacggcgcagcagcagttgttaatccagcaagcgcaggcccagctactggctgct
gcagtccaacactcagcaaatcagcagcataatgccgcaggagccaccatctctgccacg
gcagcaactcctatggcacaaatacccatcggtcaaccaatccaaatacaagatctgcaa
cagttgcagcagttgcagcaacagaacttgaacctgcagcagtttgtcctggtgcaaccg
ggtcacccaatcaccaccaacctgcaaccgacgcagttcatcatctcacaaactccacag
ggacagcaaggtctcatacaaacccagaaccttctacaacaactacctcagcaaagccaa
gccaacctcctgcaggctcagccaaacatcaccttcagcacgcagccagcaacaccgaca
cgcacaacaatagcaacggctcctatccagtcggttcagcagagccagtcgacaccaaag
cgcgtagatactccgaacatagaggaaccgagtgaccttgaggaacttgaacagtttgcc
aagacgtttaaacagagacgtatcaaactcgggttcactcagggtgatgtaggacttgcc
atgggaaaactctatggaaatgatttcagccaaactacaatctctcgttttgaagccttg
aacctcagctttaagaacatgtgcaagctcaaaccattgcttgaaaagtggttgaatgat
gcagaaaatttgtcggtagactctgcactgtcaaaccccagttccctggcatctccaggt
ctgggaatcgaagggctgagccgcaggagaaagaaacgcaccagcatagagaccaatgtt
cgagtggccttagaaaagagtttcctggagaaccaaaagcctacctcggaggagatcatg
atgattgccgaacaactgcagatggagaaggaggtgatcagagtctggttctgtaacaga
cgccagaaggagaagcggataaatcctcccagcagtaacagtggcactaccacaactacc
aaaacaatctttcacacccccacctccatggtggctagcactagtaaccttgtgacaagc
agtacaccgactactctggctgtaaatgcaatgcagatgcctgtatccactgctggtgtg
accagcttcagcatttcaggtacaactgcatcagggacagctccaacaaacgtggcatct
gtaatcaccggcctgtcgtctgcagtttccacgtcaacagtcgcttctccagctctaacc
ccttcaccatcagcgtccatttccgtgactgagtcgtccagcagtggtgatacaaacacc
acgcaaacaacctcaaccggcttaataaatcctttgtgcacaagccaaatcatggtgtca
gcatctggactgcagacagctggcactgcgctacaggcaggaattgcacatatacccact
ggtgccgggcttgctaccaacccaagcctggcagccatggctgctgctgcaggactaacc
aatcctggcctcatgtcagcccctcagtttgcagctggaggtgccttactaagtctgaat
ccagggagtcttggtggtgctcttggtccagcattaatgagtaatagcacattggcaact
attcaagcgcttgcatctagtgggacacttcctataacatccctcgatgccagtgggaat
ctcttgtttgcaaatgcagcgagtgcagggggcgctcacaacatcattacgggccctctt
attttgaacccacagaacctctccttactcaccagcaacccagccgtaagcctgatatct
gctgccgggacaactggacatgcacccagtcttcagatggcctcaatgacagcagattcc
agccagaactcttcgttcactgtgacctcggcaggcggggccaccaacaccaccaaggct
caatga
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