Leucoraja erinacea (little skate): 129704509
Help
Entry
129704509 CDS
T09122
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129704509 (tmf1)
Membrane trafficking [BR:
leri04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129704509 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Crescentin
Motif
Other DBs
NCBI-GeneID:
129704509
NCBI-ProteinID:
XP_055503624
LinkDB
All DBs
Position
16:complement(9064174..9096476)
Genome browser
AA seq
1137 aa
AA seq
DB search
MSWFNTSHLSSFAKQALSQAQKSIDRVLDIQEDEGGPWVAGVGGGGPGPGYQQATLSGKS
SLINEGWVSTQWGSSSEDNPELQSGASPKAITTPVTRTVVDESETFFNAFLNSSDAQIME
QIPVVSTPPSKSQLPNEVEATLTVHFTESIELNVPEKASSDEDCTDLVHIDLEVTDQLND
HQALCAKSKSATSSESEGLQSDDQVKLIVTENECVSGTAEVTKPNTLIASSIERVRKNSE
KTPSPPNSPSKSDTASAKDSLLEAKEQKSEDRQSNTPSPPISTFSSGTSTTSDIEVLDHE
SVISESSASSRQEAVDSKANLHLMQTSFQLLSTSACTEYHPLDEYQKLTESSGSSDAFER
IDTFSMQSLDSRSVSEINSDDETSGRGCNVASGSLTQSVNGSPTVDLVENGDESTNDAQK
ENVLDESEMEESGRSATPVNSEQPEIWPVLGLTIIENQGAECTVINRLPEGAAGDECQPR
SEHDLQQITDDLADRLEKRETQLLSVSKDKAALEEAIDNLKDEMIRLKEESSSISSIKDE
FTQRIAESEKKAQLACKERDDVKKELKTLKAELATRFTSNETADLVREKDEQIRGLLEEG
EKLSKQHLHNSNTIKKLRTKEKEHEALISKQNKKAKEQEEEIKDLQQVLDGKEEVEKQHR
ENIKKLHAVVERQEKEFSKLQVNLDELHENNRSLQSALDGSYKELAELHKSNAAKDSEAQ
EAALSREIKAKEALSVALERAQEEARQQQEALADQVADLRLGLQRAEQQQARKEDYLRHE
IGELQQRLQEADNRNQELSQSVTSASRPLLRQIENLQATLVAQSTSWEKLEKNLSNRLAD
GQAQLAAALEKERTVSEELLTLRMQVSSLDSQHGLLRQEKCRLLAQLESERDRLEKTEDE
SSRQHVAFDNLKTEYMKALEETKKEKNALTNQLEMEKLKVEQERQKAILAQDTLKEKERR
LLTNQLPEALTSTPTLSRSSSISGTEMAILQTSNHFQDDLFEHSLTPLTTSASNNNLYDV
LRMGGESSIFENLQSQLKLREGEIVQLQFEISNLERSRAIMAEELVKLTTQNEELQEKVD
EIPKLRAQLWDIDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELLKQRLT
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacacgtcgcatctgtcgagcttcgccaagcaggcgctgtcgcaagcg
cagaagtccatcgacagggtgctggacatccaggaggatgagggcgggccctgggtggcc
ggtgttggtggtggcggccccggccccgggtaccagcaagctacgttgtcaggtaaaagc
tctttgatcaacgaaggatgggtttccacacaatggggatcgtcttcagaagacaaccct
gaactgcaatctggggcttcaccgaaagctattaccacaccagttacacgcactgtggta
gacgaatctgagaccttcttcaacgcctttcttaattcatcagatgctcaaattatggag
caaattccagttgtctctacgcccccgagcaaatctcaactgcccaatgaagtagaagca
acgttgactgttcatttcactgagtccattgagctaaatgtgcctgaaaaggcaagttcc
gatgaggactgtacagatttagtacacattgatttggaggtgacagatcagctaaatgat
caccaggcactttgtgcaaagtctaaaagtgcaacatcttctgaaagtgaggggctgcag
agtgacgatcaagtaaaattaattgtgacggaaaatgaatgtgtgtcggggactgcagaa
gtaaccaagccaaacacactgattgcttctagtattgaaagggtgcgtaagaactcagaa
aaaactccaagtccgcctaacagcccttcaaaatcggacactgcttcagcgaaggattcg
ctcttggaagcaaaagagcaaaaatctgaggaccggcaaagtaatactccctcccctccc
attagtacattttcatcaggaacatctactaccagtgacattgaggtactggaccacgag
agtgtcatcagtgaaagctcagctagttcgaggcaggaagctgtggattcaaaggctaac
ctgcatttgatgcagacatcctttcagctgttatcaacatcagcctgcacagagtaccat
cctctggacgaatatcagaagctcactgagagcagcggttcctcggatgcttttgagaga
attgacacgttcagcatgcagtcattggacagccggagcgtgagtgaaattaactcagac
gatgaaacgtcgggtcgaggctgcaacgttgcctcgggatctcttactcagtccgtcaat
ggatcgccaaccgtggacctggtggagaatggggacgagagcacaaacgatgctcagaag
gagaacgtgctggatgaaagtgaaatggaggagagcggtcggagtgcaacaccagtgaac
agtgagcagccagagatctggcctgtacttggtctaacaataattgagaaccaaggtgcg
gaatgtacagtaattaataggcttcccgaaggagctgctggcgatgaatgtcagccccgt
agtgaacatgatttgcaacagataacagatgatttggcagacaggttggaaaagagagaa
acacaattgttgtctgttagcaaagataaggcagcattggaggaggcaattgataacctg
aaagacgagatgatcagactaaaggaagaaagcagcagcatctcatctatcaaggatgag
tttactcaacgcattgcagaatctgaaaagaaagcccagcttgcttgtaaagaaagggat
gatgtaaaaaaagaattaaagacactcaaagcggaactggccaccagatttacttccaat
gaaacggcagatctggtacgagagaaggatgagcagatcagaggactgctggaggaggga
gaaaagctctcgaaacaacacttgcacaattcaaatacaataaagaaactaaggacgaaa
gagaaagaacacgaggcactcatttcaaaacagaacaagaaggccaaagaacaagaagaa
gaaattaaggatctgcagcaggtgcttgatggtaaagaagaagtggaaaaacagcatcga
gagaatattaaaaagctgcacgctgtcgtggagaggcaagaaaaagagtttagcaagttg
caagtaaacttggatgaacttcatgaaaacaatcgtagtcttcagtctgcacttgatggc
tcatacaaagagcttgctgaactacataagtcaaatgcagcgaaagacagtgaagcccag
gaggcagctttgagtcgcgagattaaagccaaggaagcattgtcagtggcactggagcga
gcccaggaagaggccaggcagcagcaagaggcacttgctgatcaagtggcagatctcagg
ttgggtctccaacgggccgaacaacagcaagccaggaaagaggactatttgcgtcacgaa
attggagaattacagcagagacttcaggaagcggacaatcgcaaccaggagctaagccaa
agtgttacatctgcgagccgaccgcttctacgacagattgaaaacctacaggccacgctt
gtggcacagtccacatcctgggaaaaactggaaaagaacttatctaatcgcttagctgat
ggtcaagctcagcttgcagctgctctggaaaaagaacggacagtctcagaagaactgctt
acccttcgaatgcaagtctcttcactggattcacaacacggcttattgcgtcaagagaag
tgcagattgttagctcagctggagtcggaacgagacaggcttgagaagactgaagatgaa
agtagtaggcagcatgtggcatttgacaatctgaagactgaatacatgaaggctcttgaa
gaaacaaagaaagaaaagaatgccttgactaatcagttggaaatggaaaagttaaaagtt
gaacaggaaagacaaaaagcaatccttgcacaagatacactaaaagagaaggagaggagg
ctgcttactaatcagctgccagaggctttgacaagcactccaacgctctctcgatccagt
tccatcagtggcactgagatggcaattttacaaacttccaatcatttccaggatgattta
tttgaacattcacttacacctctaaccacatcggccagtaataacaacttgtacgacgtc
ctccgaatggggggagaatcaagcatctttgaaaatttgcagtctcaactaaagctacga
gagggggaaattgtacagctgcagtttgagatttctaatcttgaaagaagtcgagccatc
atggctgaggaacttgtcaaattaaccacgcagaatgaagaactgcaagagaaagtggat
gaaatccccaaattgcgtgcacagctttgggacattgaccaacgatacaacaccatcttg
cagatgtatggtgagaaagccgaggaagccgaagaactgcgactggacttggaagatgtg
aaaaacatgtacaagacccagattgatgaattattaaagcagaggctgacctga
DBGET
integrated database retrieval system
